RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 ZNF831Q5JPB2 1677 aa11.14□□□□□ -0.63
PDGFRB-210ENST00000522466 TJP1Q07157 1748 aa11.13□□□□□ -0.63
PDGFRB-210ENST00000522466 EIF4A2Q14240 407 aaKnown RBP11.13□□□□□ -0.63
PDGFRB-210ENST00000522466 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
PDGFRB-210ENST00000522466 ANKRD26Q9UPS8 1709 aa11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 KDM6AO15550 1401 aaPredicted RBP11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 ZPR1O75312 459 aa11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 TM4SF1P30408 202 aa11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 POLKQ9UBT6 870 aa11.12□□□□□ -0.63
PDGFRB-210ENST00000522466 NFKBIEO00221 500 aa11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 SLC34A2O95436 690 aa11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 C2CD5Q86YS7 1000 aa11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 TTLL6Q8N841 843 aa11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 DLEC1Q9Y238 1755 aa11.11□□□□□ -0.63
PDGFRB-210ENST00000522466 ZC3H4Q9UPT8 1303 aaKnown RBP11.1□□□□□ -0.63
PDGFRB-210ENST00000522466 MTHFSP49914 203 aa11.1□□□□□ -0.63
PDGFRB-210ENST00000522466 NFIXQ14938 502 aa11.1□□□□□ -0.63
PDGFRB-210ENST00000522466 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
PDGFRB-210ENST00000522466 DNAJC10Q8IXB1 793 aa11.1□□□□□ -0.63
PDGFRB-210ENST00000522466 ADAMTS7Q9UKP4 1686 aa11.1□□□□□ -0.63
PDGFRB-210ENST00000522466 CACNA1SQ13698 1873 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 CARMIL3Q8ND23 1372 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 SERPINB2P05120 415 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 BICDL1Q6ZP65 573 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 POLR3GLQ9BT43 218 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 DICER1Q9UPY3 1922 aaKnown RBP11.09□□□□□ -0.63
PDGFRB-210ENST00000522466 LBX1P52954 281 aa11.08□□□□□ -0.64
PDGFRB-210ENST00000522466 ERFEQ4G0M1 354 aa11.08□□□□□ -0.64
PDGFRB-210ENST00000522466 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
PDGFRB-210ENST00000522466 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
PDGFRB-210ENST00000522466 H0YIN7 160 aa11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 C21orf2O43822 256 aa11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 CTCFP49711 727 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 VEGFBP49765 207 aa11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 SOS1Q07889 1333 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-210ENST00000522466 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
PDGFRB-210ENST00000522466 CNTNAP1P78357 1384 aa11.06□□□□□ -0.64
PDGFRB-210ENST00000522466 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
PDGFRB-210ENST00000522466 FER1L6Q2WGJ9 1857 aa11.06□□□□□ -0.64
PDGFRB-210ENST00000522466 ANKRD31Q8N7Z5 1873 aa11.06□□□□□ -0.64
PDGFRB-210ENST00000522466 SCN11AQ9UI33 1791 aa11.05□□□□□ -0.64
PDGFRB-210ENST00000522466 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
PDGFRB-210ENST00000522466 NARFQ9UHQ1 456 aa11.05□□□□□ -0.64
PDGFRB-210ENST00000522466 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
PDGFRB-210ENST00000522466 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-210ENST00000522466 COL15A1P39059 1388 aa11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 ABHD8Q96I13 439 aa11.04□□□□□ -0.64
PDGFRB-210ENST00000522466 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
PDGFRB-210ENST00000522466 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
PDGFRB-210ENST00000522466 SLX4Q8IY92 1834 aa11.02□□□□□ -0.64
PDGFRB-210ENST00000522466 CCDC85CA6NKD9 419 aa11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 HSPA8P11142 646 aaKnown RBP11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 TBC1D9BQ66K14 1250 aa11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 SULT6B1Q6IMI4 303 aa11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 WBP1LQ9NX94 342 aa11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
PDGFRB-210ENST00000522466 TAOK3Q9H2K8 898 aa11.01□□□□□ -0.65
PDGFRB-210ENST00000522466 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
PDGFRB-210ENST00000522466 LDHDQ86WU2 507 aa11□□□□□ -0.65
PDGFRB-210ENST00000522466 CFAP44Q96MT7 982 aa11□□□□□ -0.65
PDGFRB-210ENST00000522466 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
PDGFRB-210ENST00000522466 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
PDGFRB-210ENST00000522466 NPHP1O15259 732 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 ITGBL1O95965 494 aaPredicted RBP10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 PDE6BP35913 854 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 GRM1Q13255 1194 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 DEFB115Q30KQ5 88 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 MAP1SQ66K74 1059 aaPredicted RBP10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 SCN4AP35499 1836 aa10.99□□□□□ -0.65
PDGFRB-210ENST00000522466 IQCA1LA6NCM1 817 aa10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 RNMTO43148 476 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 MLLT1Q03111 559 aaPredicted RBP10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 AKAP4Q5JQC9 854 aa10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 PRPF40BQ6NWY9 871 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms