RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 SLC39A6Q13433 755 aa28.92■■■□□ 2.22
HOXA3-205ENST00000522456 NFE2L2Q16236 605 aa28.92■■■□□ 2.22
HOXA3-205ENST00000522456 MCM10Q7L590 875 aa28.92■■■□□ 2.22
HOXA3-205ENST00000522456 CRKLP46109 303 aaKnown RBP28.91■■■□□ 2.22
HOXA3-205ENST00000522456 CEP350Q5VT06 3117 aa28.9■■■□□ 2.22
HOXA3-205ENST00000522456 A0A0G2JLW4 131 aa28.9■■■□□ 2.22
HOXA3-205ENST00000522456 DCTN1Q14203 1278 aa28.9■■■□□ 2.22
HOXA3-205ENST00000522456 CCDC146Q8IYE0 955 aa28.9■■■□□ 2.22
HOXA3-205ENST00000522456 PARP3Q9Y6F1 533 aa28.9■■■□□ 2.22
HOXA3-205ENST00000522456 CEMIPQ8WUJ3 1361 aa28.89■■■□□ 2.22
HOXA3-205ENST00000522456 CCDC184Q52MB2 194 aa28.89■■■□□ 2.22
HOXA3-205ENST00000522456 BCS1LQ9Y276 419 aa28.89■■■□□ 2.22
HOXA3-205ENST00000522456 TTC5Q8N0Z6 440 aa28.87■■■□□ 2.21
HOXA3-205ENST00000522456 RUNDC1Q96C34 613 aa28.87■■■□□ 2.21
HOXA3-205ENST00000522456 USP42Q9H9J4 1324 aaKnown RBP28.86■■■□□ 2.21
HOXA3-205ENST00000522456 KCPQ6ZWJ8 1503 aa28.85■■■□□ 2.21
HOXA3-205ENST00000522456 BTBD11A6QL63 1104 aa28.85■■■□□ 2.21
HOXA3-205ENST00000522456 DPEP1P16444 411 aa28.85■■■□□ 2.21
HOXA3-205ENST00000522456 SRP68Q9UHB9 627 aaKnown RBP28.85■■■□□ 2.21
HOXA3-205ENST00000522456 SIPA1L3O60292 1781 aaPredicted RBP28.85■■■□□ 2.21
HOXA3-205ENST00000522456 UBR2Q8IWV8 1755 aa28.84■■■□□ 2.21
HOXA3-205ENST00000522456 RIPK4P57078 832 aa28.84■■■□□ 2.21
HOXA3-205ENST00000522456 MRS2Q9HD23 443 aa28.84■■■□□ 2.21
HOXA3-205ENST00000522456 BRCA1P38398 1863 aaKnown RBP28.84■■■□□ 2.21
HOXA3-205ENST00000522456 ZNF790Q6PG37 636 aa28.83■■■□□ 2.21
HOXA3-205ENST00000522456 TMPOP42166 694 aaKnown RBP28.82■■■□□ 2.2
HOXA3-205ENST00000522456 FKBP8Q14318 412 aa28.82■■■□□ 2.2
HOXA3-205ENST00000522456 INTS5Q6P9B9 1019 aaKnown RBP28.82■■■□□ 2.2
HOXA3-205ENST00000522456 VSIG10Q8N0Z9 540 aa28.82■■■□□ 2.2
HOXA3-205ENST00000522456 DLG5Q8TDM6 1919 aa28.82■■■□□ 2.2
HOXA3-205ENST00000522456 NEUROD2Q15784 382 aa28.81■■■□□ 2.2
HOXA3-205ENST00000522456 RRP7AQ9Y3A4 280 aaKnown RBP28.81■■■□□ 2.2
HOXA3-205ENST00000522456 KIF3CO14782 793 aa28.8■■■□□ 2.2
HOXA3-205ENST00000522456 HSPA6P17066 643 aa28.8■■■□□ 2.2
HOXA3-205ENST00000522456 ARHGAP27Q6ZUM4 889 aa28.8■■■□□ 2.2
HOXA3-205ENST00000522456 DNAJC10Q8IXB1 793 aa28.8■■■□□ 2.2
HOXA3-205ENST00000522456 DDR1Q08345 913 aa28.79■■■□□ 2.2
HOXA3-205ENST00000522456 TAF7Q15545 349 aaPredicted RBP28.79■■■□□ 2.2
HOXA3-205ENST00000522456 THUMPD2Q9BTF0 503 aaKnown RBP28.78■■■□□ 2.2
HOXA3-205ENST00000522456 KCNA3P22001 575 aa28.77■■■□□ 2.2
HOXA3-205ENST00000522456 LMOD3Q0VAK6 560 aa28.77■■■□□ 2.2
HOXA3-205ENST00000522456 ZNF496Q96IT1 587 aaPredicted RBP28.77■■■□□ 2.2
HOXA3-205ENST00000522456 ARFGEF1Q9Y6D6 1849 aa28.76■■■□□ 2.19
HOXA3-205ENST00000522456 KCNQ3O43525 872 aa28.76■■■□□ 2.19
HOXA3-205ENST00000522456 PNISRQ8TF01 805 aaKnown RBP28.76■■■□□ 2.19
HOXA3-205ENST00000522456 SOS1Q07889 1333 aaPredicted RBP28.75■■■□□ 2.19
HOXA3-205ENST00000522456 FMNL2Q96PY5 1086 aa28.75■■■□□ 2.19
HOXA3-205ENST00000522456 MIS18AQ9NYP9 233 aa28.75■■■□□ 2.19
HOXA3-205ENST00000522456 PIM2Q9P1W9 311 aa28.75■■■□□ 2.19
HOXA3-205ENST00000522456 ZPR1O75312 459 aa28.74■■■□□ 2.19
HOXA3-205ENST00000522456 CYP19A1P11511 503 aaPredicted RBP28.74■■■□□ 2.19
HOXA3-205ENST00000522456 POLRMTO00411 1230 aaKnown RBP28.73■■■□□ 2.19
HOXA3-205ENST00000522456 USPL1Q5W0Q7 1092 aa28.73■■■□□ 2.19
HOXA3-205ENST00000522456 HEG1Q9ULI3 1381 aa28.73■■■□□ 2.19
HOXA3-205ENST00000522456 TM4SF1P30408 202 aa28.72■■■□□ 2.19
HOXA3-205ENST00000522456 APAF1O14727 1248 aa28.71■■■□□ 2.19
HOXA3-205ENST00000522456 DALRD3Q5D0E6 543 aaKnown RBP28.71■■■□□ 2.19
HOXA3-205ENST00000522456 TEX13AQ9BXU3 409 aaPredicted RBP28.71■■■□□ 2.19
HOXA3-205ENST00000522456 COL15A1P39059 1388 aa28.71■■■□□ 2.19
HOXA3-205ENST00000522456 STARD3NLO95772 234 aa28.7■■■□□ 2.18
HOXA3-205ENST00000522456 CHRNA5P30532 468 aa28.69■■■□□ 2.18
HOXA3-205ENST00000522456 TRIM35Q9UPQ4 493 aa28.69■■■□□ 2.18
HOXA3-205ENST00000522456 ZBTB1Q9Y2K1 713 aa28.69■■■□□ 2.18
HOXA3-205ENST00000522456 C9orf131Q5VYM1 1079 aa28.68■■■□□ 2.18
HOXA3-205ENST00000522456 NARFQ9UHQ1 456 aa28.68■■■□□ 2.18
HOXA3-205ENST00000522456 TOMM70O94826 608 aa28.65■■■□□ 2.18
HOXA3-205ENST00000522456 NFIXQ14938 502 aa28.65■■■□□ 2.18
HOXA3-205ENST00000522456 NMRK2Q9NPI5 230 aa28.65■■■□□ 2.18
HOXA3-205ENST00000522456 NRXN2Q9P2S2 1712 aa28.64■■■□□ 2.18
HOXA3-205ENST00000522456 SNRPA1P09661 255 aaKnown RBP28.64■■■□□ 2.18
HOXA3-205ENST00000522456 TSPYL4Q9UJ04 414 aa28.64■■■□□ 2.18
HOXA3-205ENST00000522456 AFDNP55196 1824 aaKnown RBP28.64■■■□□ 2.17
HOXA3-205ENST00000522456 CANXP27824 592 aaKnown RBP28.63■■■□□ 2.17
HOXA3-205ENST00000522456 FAM9BQ8IZU0 186 aa28.63■■■□□ 2.17
HOXA3-205ENST00000522456 BCL2L12Q9HB09 334 aa28.62■■■□□ 2.17
HOXA3-205ENST00000522456 LAS1LQ9Y4W2 734 aaKnown RBP28.62■■■□□ 2.17
HOXA3-205ENST00000522456 PRAMEF22A3QJZ6 481 aa28.61■■■□□ 2.17
HOXA3-205ENST00000522456 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
HOXA3-205ENST00000522456 USP16Q9Y5T5 823 aa28.61■■■□□ 2.17
HOXA3-205ENST00000522456 EIF4A1P60842 406 aaKnown RBP28.6■■■□□ 2.17
HOXA3-205ENST00000522456 BABAM1Q9NWV8 329 aa28.6■■■□□ 2.17
HOXA3-205ENST00000522456 A0A087WZG4 1122 aa28.59■■■□□ 2.17
HOXA3-205ENST00000522456 APLP1P51693 650 aa28.59■■■□□ 2.17
HOXA3-205ENST00000522456 KDM3BQ7LBC6 1761 aa28.59■■■□□ 2.17
HOXA3-205ENST00000522456 DLEC1Q9Y238 1755 aa28.58■■■□□ 2.17
HOXA3-205ENST00000522456 A1BGP04217 495 aa28.58■■■□□ 2.17
HOXA3-205ENST00000522456 SERPINB2P05120 415 aa28.58■■■□□ 2.17
HOXA3-205ENST00000522456 DIEXFQ68CQ4 756 aaKnown RBP28.57■■■□□ 2.16
HOXA3-205ENST00000522456 IL6STP40189 918 aaPredicted RBP28.56■■■□□ 2.16
HOXA3-205ENST00000522456 EIF5P55010 431 aaKnown RBP28.56■■■□□ 2.16
HOXA3-205ENST00000522456 NPM2Q86SE8 214 aaKnown RBP28.56■■■□□ 2.16
HOXA3-205ENST00000522456 KDM2BQ8NHM5 1336 aa28.56■■■□□ 2.16
HOXA3-205ENST00000522456 ZNF330Q9Y3S2 320 aaPredicted RBP28.56■■■□□ 2.16
HOXA3-205ENST00000522456 SBF1O95248 1867 aa28.55■■■□□ 2.16
HOXA3-205ENST00000522456 CHL1O00533 1208 aa28.55■■■□□ 2.16
HOXA3-205ENST00000522456 CALD1Q05682 793 aaKnown RBP28.55■■■□□ 2.16
HOXA3-205ENST00000522456 C16orf71Q8IYS4 520 aaPredicted RBP28.55■■■□□ 2.16
HOXA3-205ENST00000522456 SCN7AQ01118 1682 aa28.54■■■□□ 2.16
HOXA3-205ENST00000522456 IFFO2Q5TF58 517 aa28.54■■■□□ 2.16
HOXA3-205ENST00000522456 RBM46Q8TBY0 533 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms