RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
SPARC-205ENST00000522348 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
SPARC-205ENST00000522348 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
SPARC-205ENST00000522348 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
SPARC-205ENST00000522348 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
SPARC-205ENST00000522348 AFF2P51816 1311 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 SIPA1L3O60292 1781 aaPredicted RBP12.11□□□□□ -0.47
SPARC-205ENST00000522348 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 USP44Q9H0E7 712 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
SPARC-205ENST00000522348 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
SPARC-205ENST00000522348 ATP8B2P98198 1209 aa12.1□□□□□ -0.47
SPARC-205ENST00000522348 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
SPARC-205ENST00000522348 USP21Q9UK80 565 aa12.1□□□□□ -0.47
SPARC-205ENST00000522348 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
SPARC-205ENST00000522348 ANXA1P04083 346 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
SPARC-205ENST00000522348 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 ATP10DQ9P241 1426 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
SPARC-205ENST00000522348 MYL6BP14649 208 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 AIMP1Q12904 312 aaKnown RBP12.08□□□□□ -0.48
SPARC-205ENST00000522348 DDB1Q16531 1140 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
SPARC-205ENST00000522348 QTRT2Q9H974 415 aaKnown RBP12.08□□□□□ -0.48
SPARC-205ENST00000522348 CCDC9Q9Y3X0 531 aaKnown RBP12.08□□□□□ -0.48
SPARC-205ENST00000522348 ADCY9O60503 1353 aa12.07□□□□□ -0.48
SPARC-205ENST00000522348 IBTKQ9P2D0 1353 aaPredicted RBP12.07□□□□□ -0.48
SPARC-205ENST00000522348 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
SPARC-205ENST00000522348 PIGBQ92521 554 aa12.07□□□□□ -0.48
SPARC-205ENST00000522348 C9orf78Q9NZ63 289 aaPredicted RBP12.07□□□□□ -0.48
SPARC-205ENST00000522348 SLIT2O94813 1529 aa12.06□□□□□ -0.48
SPARC-205ENST00000522348 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
SPARC-205ENST00000522348 RXRBP28702 533 aa12.06□□□□□ -0.48
SPARC-205ENST00000522348 VPS72Q15906 364 aa12.06□□□□□ -0.48
SPARC-205ENST00000522348 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
SPARC-205ENST00000522348 FNBP4Q8N3X1 1017 aaPredicted RBP12.06□□□□□ -0.48
SPARC-205ENST00000522348 METTL22Q9BUU2 404 aaPredicted RBP12.06□□□□□ -0.48
SPARC-205ENST00000522348 LNPKQ9C0E8 428 aa12.06□□□□□ -0.48
SPARC-205ENST00000522348 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
SPARC-205ENST00000522348 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
SPARC-205ENST00000522348 LRRFIP2Q9Y608 721 aaKnown RBP12.06□□□□□ -0.48
SPARC-205ENST00000522348 STARD3NLO95772 234 aa12.05□□□□□ -0.48
SPARC-205ENST00000522348 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
SPARC-205ENST00000522348 LRP10Q7Z4F1 713 aa12.05□□□□□ -0.48
SPARC-205ENST00000522348 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
SPARC-205ENST00000522348 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
SPARC-205ENST00000522348 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
SPARC-205ENST00000522348 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
SPARC-205ENST00000522348 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
SPARC-205ENST00000522348 UTYO14607 1347 aa12.04□□□□□ -0.48
SPARC-205ENST00000522348 TNS2Q63HR2 1409 aa12.03□□□□□ -0.48
SPARC-205ENST00000522348 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
SPARC-205ENST00000522348 NBPF7P0C2Y1 421 aaPredicted RBP12.03□□□□□ -0.48
SPARC-205ENST00000522348 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
SPARC-205ENST00000522348 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
SPARC-205ENST00000522348 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 GRM8O00222 908 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
SPARC-205ENST00000522348 A1BGP04217 495 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 RBM6P78332 1123 aaKnown RBP12.02□□□□□ -0.49
SPARC-205ENST00000522348 MTX1Q13505 466 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 POLA2Q14181 598 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 NBPF14Q5TI25 921 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
SPARC-205ENST00000522348 ILDR2Q71H61 639 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 NBPF15Q8N660 670 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
SPARC-205ENST00000522348 BCL9O00512 1426 aa12.02□□□□□ -0.49
SPARC-205ENST00000522348 PLCH1Q4KWH8 1693 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 A0A0G2JS52 829 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 PNMA6EA0A0J9YXQ4 647 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 MYT1Q01538 1121 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 GCKRQ14397 625 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 CWF19L2Q2TBE0 894 aaKnown RBP12.01□□□□□ -0.49
SPARC-205ENST00000522348 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 MARCH10Q8NA82 808 aaPredicted RBP12.01□□□□□ -0.49
SPARC-205ENST00000522348 SYTL4Q96C24 671 aaPredicted RBP12.01□□□□□ -0.49
SPARC-205ENST00000522348 MYD88Q99836 296 aa12.01□□□□□ -0.49
SPARC-205ENST00000522348 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms