RNA–Protein interactions for RNA: ENST00000522309.1

RTL8A-204, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 1 (best)

Gene RTL8A, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-204ENST00000522309 DALRD3Q5D0E6 543 aaKnown RBP23.2■■□□□ 1.3
RTL8A-204ENST00000522309 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
RTL8A-204ENST00000522309 TOMM70O94826 608 aa23.19■■□□□ 1.3
RTL8A-204ENST00000522309 BCL2L12Q9HB09 334 aa23.19■■□□□ 1.3
RTL8A-204ENST00000522309 NARFQ9UHQ1 456 aa23.19■■□□□ 1.3
RTL8A-204ENST00000522309 ZBTB1Q9Y2K1 713 aa23.19■■□□□ 1.3
RTL8A-204ENST00000522309 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
RTL8A-204ENST00000522309 NFIXQ14938 502 aa23.18■■□□□ 1.3
RTL8A-204ENST00000522309 NRXN2Q9P2S2 1712 aa23.17■■□□□ 1.3
RTL8A-204ENST00000522309 VSIG10Q8N0Z9 540 aa23.17■■□□□ 1.3
RTL8A-204ENST00000522309 COL15A1P39059 1388 aa23.16■■□□□ 1.3
RTL8A-204ENST00000522309 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
RTL8A-204ENST00000522309 IFFO2Q5TF58 517 aa23.15■■□□□ 1.3
RTL8A-204ENST00000522309 IL17REQ8NFR9 667 aa23.14■■□□□ 1.29
RTL8A-204ENST00000522309 NPC1L1Q9UHC9 1359 aa23.13■■□□□ 1.29
RTL8A-204ENST00000522309 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
RTL8A-204ENST00000522309 APLP1P51693 650 aa23.12■■□□□ 1.29
RTL8A-204ENST00000522309 DNAJC5GQ8N7S2 189 aa23.12■■□□□ 1.29
RTL8A-204ENST00000522309 RNF181Q9P0P0 153 aa23.12■■□□□ 1.29
RTL8A-204ENST00000522309 SIPA1L3O60292 1781 aaPredicted RBP23.12■■□□□ 1.29
RTL8A-204ENST00000522309 SERPINB2P05120 415 aa23.11■■□□□ 1.29
RTL8A-204ENST00000522309 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
RTL8A-204ENST00000522309 DLEC1Q9Y238 1755 aa23.11■■□□□ 1.29
RTL8A-204ENST00000522309 ZNF496Q96IT1 587 aaPredicted RBP23.1■■□□□ 1.29
RTL8A-204ENST00000522309 CCDC88AQ3V6T2 1871 aa23.1■■□□□ 1.29
RTL8A-204ENST00000522309 U2SURPO15042 1029 aaKnown RBP23.09■■□□□ 1.29
RTL8A-204ENST00000522309 CNGB1Q14028 1251 aaPredicted RBP23.09■■□□□ 1.29
RTL8A-204ENST00000522309 RBM46Q8TBY0 533 aaKnown RBP23.09■■□□□ 1.29
RTL8A-204ENST00000522309 PRELPP51888 382 aa23.08■■□□□ 1.29
RTL8A-204ENST00000522309 ZNF790Q6PG37 636 aa23.08■■□□□ 1.29
RTL8A-204ENST00000522309 CARMIL3Q8ND23 1372 aa23.07■■□□□ 1.28
RTL8A-204ENST00000522309 GNAT3A8MTJ3 354 aa23.07■■□□□ 1.28
RTL8A-204ENST00000522309 STARD3NLO95772 234 aa23.07■■□□□ 1.28
RTL8A-204ENST00000522309 RASSF7Q02833 373 aa23.07■■□□□ 1.28
RTL8A-204ENST00000522309 TTC5Q8N0Z6 440 aa23.07■■□□□ 1.28
RTL8A-204ENST00000522309 RRAGCQ9HB90 399 aa23.07■■□□□ 1.28
RTL8A-204ENST00000522309 HEG1Q9ULI3 1381 aa23.06■■□□□ 1.28
RTL8A-204ENST00000522309 GAS2L2Q8NHY3 880 aa23.06■■□□□ 1.28
RTL8A-204ENST00000522309 ANKRD31Q8N7Z5 1873 aa23.06■■□□□ 1.28
RTL8A-204ENST00000522309 KDM2BQ8NHM5 1336 aa23.06■■□□□ 1.28
RTL8A-204ENST00000522309 TEFQ10587 303 aa23.05■■□□□ 1.28
RTL8A-204ENST00000522309 BICDL1Q6ZP65 573 aa23.05■■□□□ 1.28
RTL8A-204ENST00000522309 C2CD5Q86YS7 1000 aa23.05■■□□□ 1.28
RTL8A-204ENST00000522309 PHACTR3Q96KR7 559 aa23.05■■□□□ 1.28
RTL8A-204ENST00000522309 A0A087WZG4 1122 aa23.04■■□□□ 1.28
RTL8A-204ENST00000522309 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
RTL8A-204ENST00000522309 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
RTL8A-204ENST00000522309 WDR90Q96KV7 1748 aa23.04■■□□□ 1.28
RTL8A-204ENST00000522309 KCNQ3O43525 872 aa23.03■■□□□ 1.28
RTL8A-204ENST00000522309 TEX13AQ9BXU3 409 aaPredicted RBP23.03■■□□□ 1.28
RTL8A-204ENST00000522309 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
RTL8A-204ENST00000522309 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
RTL8A-204ENST00000522309 C16orf71Q8IYS4 520 aaPredicted RBP23.02■■□□□ 1.28
RTL8A-204ENST00000522309 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
RTL8A-204ENST00000522309 H0YIN7 160 aa23.01■■□□□ 1.27
RTL8A-204ENST00000522309 A1BGP04217 495 aa23.01■■□□□ 1.27
RTL8A-204ENST00000522309 LMNB1P20700 586 aa23.01■■□□□ 1.27
RTL8A-204ENST00000522309 HTRA3P83110 453 aa23.01■■□□□ 1.27
RTL8A-204ENST00000522309 FSTL1Q12841 308 aa23.01■■□□□ 1.27
RTL8A-204ENST00000522309 SCN7AQ01118 1682 aa23■■□□□ 1.27
RTL8A-204ENST00000522309 IL6STP40189 918 aaPredicted RBP23■■□□□ 1.27
RTL8A-204ENST00000522309 RSPH6AQ9H0K4 717 aa23■■□□□ 1.27
RTL8A-204ENST00000522309 NFKBIEO00221 500 aa22.99■■□□□ 1.27
RTL8A-204ENST00000522309 PRKAR2BP31323 418 aa22.99■■□□□ 1.27
RTL8A-204ENST00000522309 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
RTL8A-204ENST00000522309 FMNL2Q96PY5 1086 aa22.99■■□□□ 1.27
RTL8A-204ENST00000522309 ZC3H4Q9UPT8 1303 aaKnown RBP22.99■■□□□ 1.27
RTL8A-204ENST00000522309 PRR5LQ6MZQ0 368 aa22.98■■□□□ 1.27
RTL8A-204ENST00000522309 ZNF330Q9Y3S2 320 aaPredicted RBP22.98■■□□□ 1.27
RTL8A-204ENST00000522309 COL11A2P13942 1736 aaPredicted RBP22.97■■□□□ 1.27
RTL8A-204ENST00000522309 CAMTA2O94983 1202 aa22.97■■□□□ 1.27
RTL8A-204ENST00000522309 BRIP1Q9BX63 1249 aa22.97■■□□□ 1.27
RTL8A-204ENST00000522309 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
RTL8A-204ENST00000522309 FER1L6Q2WGJ9 1857 aa22.96■■□□□ 1.27
RTL8A-204ENST00000522309 GLTPD2A6NH11 291 aa22.96■■□□□ 1.27
RTL8A-204ENST00000522309 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
RTL8A-204ENST00000522309 DICER1Q9UPY3 1922 aaKnown RBP22.96■■□□□ 1.27
RTL8A-204ENST00000522309 TIAM2Q8IVF5 1701 aa22.95■■□□□ 1.26
RTL8A-204ENST00000522309 ZNF622Q969S3 477 aaKnown RBP eCLIP22.95■■□□□ 1.26
RTL8A-204ENST00000522309 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
RTL8A-204ENST00000522309 PDE6BP35913 854 aa22.94■■□□□ 1.26
RTL8A-204ENST00000522309 KLRG1Q96E93 195 aa22.94■■□□□ 1.26
RTL8A-204ENST00000522309 PDZRN3Q9UPQ7 1066 aa22.94■■□□□ 1.26
RTL8A-204ENST00000522309 SLX4Q8IY92 1834 aa22.94■■□□□ 1.26
RTL8A-204ENST00000522309 BCORQ6W2J9 1755 aa22.94■■□□□ 1.26
RTL8A-204ENST00000522309 PIP4K2AP48426 406 aaPredicted RBP22.93■■□□□ 1.26
RTL8A-204ENST00000522309 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
RTL8A-204ENST00000522309 POTECB2RU33 542 aa22.92■■□□□ 1.26
RTL8A-204ENST00000522309 C21orf2O43822 256 aa22.92■■□□□ 1.26
RTL8A-204ENST00000522309 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
RTL8A-204ENST00000522309 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
RTL8A-204ENST00000522309 SMC1BQ8NDV3 1235 aa22.92■■□□□ 1.26
RTL8A-204ENST00000522309 SETDB2Q96T68 719 aa22.92■■□□□ 1.26
RTL8A-204ENST00000522309 MCM10Q7L590 875 aa22.91■■□□□ 1.26
RTL8A-204ENST00000522309 DZIP3Q86Y13 1208 aaKnown RBP22.91■■□□□ 1.26
RTL8A-204ENST00000522309 JMYQ8N9B5 988 aa22.91■■□□□ 1.26
RTL8A-204ENST00000522309 ZNF219Q9P2Y4 722 aaPredicted RBP22.91■■□□□ 1.26
RTL8A-204ENST00000522309 CACNA1SQ13698 1873 aa22.91■■□□□ 1.26
RTL8A-204ENST00000522309 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
RTL8A-204ENST00000522309 U2AF1L5P0DN76 240 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms