RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 DIP2CQ9Y2E4 1556 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 MLECQ14165 292 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 PAXBP1Q9Y5B6 917 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 LRRC7Q96NW7 1537 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 PDE1AP54750 535 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 HDGFL2Q7Z4V5 671 aaPredicted RBP11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 ESYT1Q9BSJ8 1104 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 ZFYVE9O95405 1425 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 ATP10DQ9P241 1426 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 DRC7Q8IY82 874 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 C8orf58Q8NAV2 365 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 RGS12O14924 1447 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 ARHGEF40Q8TER5 1519 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 ERICH4A6NGS2 130 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 CCDC192P0DO97 292 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 ZSCAN22P10073 491 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 DCTN1Q14203 1278 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 ATP6V1DQ9Y5K8 247 aa11.48□□□□□ -0.57
CTNNA1-230ENST00000521724 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
CTNNA1-230ENST00000521724 NME9Q86XW9 330 aa11.47□□□□□ -0.57
CTNNA1-230ENST00000521724 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
CTNNA1-230ENST00000521724 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
CTNNA1-230ENST00000521724 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
CTNNA1-230ENST00000521724 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
CTNNA1-230ENST00000521724 LRMPQ12912 555 aa11.46□□□□□ -0.57
CTNNA1-230ENST00000521724 ZNF592Q92610 1267 aa11.46□□□□□ -0.57
CTNNA1-230ENST00000521724 STX6O43752 255 aa11.46□□□□□ -0.58
CTNNA1-230ENST00000521724 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.58
CTNNA1-230ENST00000521724 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.58
CTNNA1-230ENST00000521724 RILPL2Q969X0 211 aa11.46□□□□□ -0.58
CTNNA1-230ENST00000521724 HMMRO75330 724 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 IL13P35225 146 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 FAM69CQ0P6D2 419 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 TPD52L1Q16890 204 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 FAM200AQ8TCP9 573 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 ANKRD26Q9UPS8 1709 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 ALKQ9UM73 1620 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 SYT1P21579 422 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 SLC20A2Q08357 652 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 KRT24Q2M2I5 525 aa11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-230ENST00000521724 F13A1P00488 732 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 MEIS3Q99687 375 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 NRBP1Q9UHY1 535 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 MSH6P52701 1360 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 CHMLP26374 656 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 CEP135Q66GS9 1140 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 ZSCAN25Q6NSZ9 544 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 TRIM5Q9C035 493 aa11.44□□□□□ -0.58
CTNNA1-230ENST00000521724 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
CTNNA1-230ENST00000521724 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-230ENST00000521724 PREX1Q8TCU6 1659 aa11.43□□□□□ -0.58
CTNNA1-230ENST00000521724 DNM1Q05193 864 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-230ENST00000521724 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
CTNNA1-230ENST00000521724 NEO1Q92859 1461 aa11.43□□□□□ -0.58
CTNNA1-230ENST00000521724 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 V9GYY5 206 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 SSH2Q76I76 1423 aa11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 TULP2O00295 520 aa11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 CAMK4Q16566 473 aa11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
CTNNA1-230ENST00000521724 KIF20BQ96Q89 1820 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 TYRO3Q06418 890 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 CAPN2P17655 700 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 FAM193AP78312 1265 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 FBXO38Q6PIJ6 1188 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 TXNDC2Q86VQ3 553 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 RTF1Q92541 710 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 NUP62CLQ9H1M0 184 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 MRVI1Q9Y6F6 885 aa11.41□□□□□ -0.58
CTNNA1-230ENST00000521724 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 IL17RAQ96F46 866 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 ST7Q9NRC1 585 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 HSPA4P34932 840 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 CREBRFQ8IUR6 639 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 CACTINQ8WUQ7 758 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms