RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 ADAMTS7Q9UKP4 1686 aa15.71■□□□□ 0.11
IGHV3-60-201ENST00000521678 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
IGHV3-60-201ENST00000521678 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
IGHV3-60-201ENST00000521678 PRELPP51888 382 aa15.7■□□□□ 0.1
IGHV3-60-201ENST00000521678 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
IGHV3-60-201ENST00000521678 VSIG10Q8N0Z9 540 aa15.7■□□□□ 0.1
IGHV3-60-201ENST00000521678 KNSTRNQ9Y448 316 aa15.7■□□□□ 0.1
IGHV3-60-201ENST00000521678 TJP1Q07157 1748 aa15.69■□□□□ 0.1
IGHV3-60-201ENST00000521678 LMNB1P20700 586 aa15.69■□□□□ 0.1
IGHV3-60-201ENST00000521678 SLC39A6Q13433 755 aa15.69■□□□□ 0.1
IGHV3-60-201ENST00000521678 GLTPD2A6NH11 291 aa15.68■□□□□ 0.1
IGHV3-60-201ENST00000521678 SERPINB2P05120 415 aa15.68■□□□□ 0.1
IGHV3-60-201ENST00000521678 TTLL6Q8N841 843 aa15.68■□□□□ 0.1
IGHV3-60-201ENST00000521678 SMC1BQ8NDV3 1235 aa15.68■□□□□ 0.1
IGHV3-60-201ENST00000521678 ZBTB1Q9Y2K1 713 aa15.68■□□□□ 0.1
IGHV3-60-201ENST00000521678 VEGFAP15692 232 aaPredicted RBP15.67■□□□□ 0.1
IGHV3-60-201ENST00000521678 COL13A1Q5TAT6 717 aaPredicted RBP15.67■□□□□ 0.1
IGHV3-60-201ENST00000521678 COL15A1P39059 1388 aa15.66■□□□□ 0.1
IGHV3-60-201ENST00000521678 EIF5P55010 431 aaKnown RBP15.66■□□□□ 0.1
IGHV3-60-201ENST00000521678 RASSF7Q02833 373 aa15.66■□□□□ 0.1
IGHV3-60-201ENST00000521678 MTHFSDQ2M296 383 aaKnown RBP15.66■□□□□ 0.1
IGHV3-60-201ENST00000521678 WDR90Q96KV7 1748 aa15.65■□□□□ 0.1
IGHV3-60-201ENST00000521678 MRC1P22897 1456 aa15.65■□□□□ 0.1
IGHV3-60-201ENST00000521678 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
IGHV3-60-201ENST00000521678 POTECB2RU33 542 aa15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 H0YIN7 160 aa15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 NFKBIEO00221 500 aa15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 PER1O15534 1290 aaPredicted RBP15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 SBF1O95248 1867 aa15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 HMOX1P09601 288 aa15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 C2CD5Q86YS7 1000 aa15.64■□□□□ 0.09
IGHV3-60-201ENST00000521678 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
IGHV3-60-201ENST00000521678 STARD3NLO95772 234 aa15.63■□□□□ 0.09
IGHV3-60-201ENST00000521678 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
IGHV3-60-201ENST00000521678 PDZRN3Q9UPQ7 1066 aa15.63■□□□□ 0.09
IGHV3-60-201ENST00000521678 A0A087WZG4 1122 aa15.62■□□□□ 0.09
IGHV3-60-201ENST00000521678 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
IGHV3-60-201ENST00000521678 BRIP1Q9BX63 1249 aa15.62■□□□□ 0.09
IGHV3-60-201ENST00000521678 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
IGHV3-60-201ENST00000521678 IL17REQ8NFR9 667 aa15.61■□□□□ 0.09
IGHV3-60-201ENST00000521678 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
IGHV3-60-201ENST00000521678 TBC1D9BQ66K14 1250 aa15.6■□□□□ 0.09
IGHV3-60-201ENST00000521678 ZNF496Q96IT1 587 aaPredicted RBP15.6■□□□□ 0.09
IGHV3-60-201ENST00000521678 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
IGHV3-60-201ENST00000521678 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
IGHV3-60-201ENST00000521678 ZNF790Q6PG37 636 aa15.59■□□□□ 0.09
IGHV3-60-201ENST00000521678 AFDNP55196 1824 aaKnown RBP15.59■□□□□ 0.09
IGHV3-60-201ENST00000521678 PDE6BP35913 854 aa15.58■□□□□ 0.08
IGHV3-60-201ENST00000521678 IL6STP40189 918 aaPredicted RBP15.58■□□□□ 0.08
IGHV3-60-201ENST00000521678 PRR5LQ6MZQ0 368 aa15.58■□□□□ 0.08
IGHV3-60-201ENST00000521678 DPY19L2Q6NUT2 758 aa15.58■□□□□ 0.08
IGHV3-60-201ENST00000521678 BICDL1Q6ZP65 573 aa15.58■□□□□ 0.08
IGHV3-60-201ENST00000521678 HEG1Q9ULI3 1381 aa15.58■□□□□ 0.08
IGHV3-60-201ENST00000521678 TNS4Q8IZW8 715 aa15.57■□□□□ 0.08
IGHV3-60-201ENST00000521678 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
IGHV3-60-201ENST00000521678 TBC1D2BQ9UPU7 963 aa15.57■□□□□ 0.08
IGHV3-60-201ENST00000521678 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
IGHV3-60-201ENST00000521678 LTBP3Q9NS15 1303 aa15.57■□□□□ 0.08
IGHV3-60-201ENST00000521678 GNAT3A8MTJ3 354 aa15.56■□□□□ 0.08
IGHV3-60-201ENST00000521678 C21orf2O43822 256 aa15.56■□□□□ 0.08
IGHV3-60-201ENST00000521678 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.08
IGHV3-60-201ENST00000521678 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
IGHV3-60-201ENST00000521678 DLEC1Q9Y238 1755 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 A1BGP04217 495 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 HSPA1AP0DMV8 641 aaKnown RBP15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 HSPA1BP0DMV9 641 aaKnown RBP15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 SRGNP10124 158 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 TEFQ10587 303 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 GAS2L2Q8NHY3 880 aa15.54■□□□□ 0.08
IGHV3-60-201ENST00000521678 CEMIPQ8WUJ3 1361 aa15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 C7orf43Q8WVR3 580 aa15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 SETDB2Q96T68 719 aa15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 UBR2Q8IWV8 1755 aa15.53■□□□□ 0.08
IGHV3-60-201ENST00000521678 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
IGHV3-60-201ENST00000521678 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
IGHV3-60-201ENST00000521678 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.08
IGHV3-60-201ENST00000521678 KLRG2A4D1S0 409 aaPredicted RBP15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 KCNQ3O43525 872 aa15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 CLEC4GQ6UXB4 293 aa15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 CREBZFQ9NS37 354 aa15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 COL3A1P02461 1466 aaPredicted RBP15.51■□□□□ 0.07
IGHV3-60-201ENST00000521678 DDNO94850 711 aaPredicted RBP15.5■□□□□ 0.07
IGHV3-60-201ENST00000521678 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
IGHV3-60-201ENST00000521678 PRPF40BQ6NWY9 871 aaKnown RBP15.5■□□□□ 0.07
IGHV3-60-201ENST00000521678 MASTLQ96GX5 879 aa15.5■□□□□ 0.07
IGHV3-60-201ENST00000521678 PHACTR3Q96KR7 559 aa15.5■□□□□ 0.07
IGHV3-60-201ENST00000521678 USP16Q9Y5T5 823 aa15.5■□□□□ 0.07
IGHV3-60-201ENST00000521678 ANKRD31Q8N7Z5 1873 aa15.49■□□□□ 0.07
IGHV3-60-201ENST00000521678 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
IGHV3-60-201ENST00000521678 CAPN15O75808 1086 aa15.49■□□□□ 0.07
IGHV3-60-201ENST00000521678 POTEIP0CG38 1075 aa15.49■□□□□ 0.07
IGHV3-60-201ENST00000521678 POTEJP0CG39 1038 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms