RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
CSMD1-210ENST00000521646 PIGBQ92521 554 aa15.52■□□□□ 0.08
CSMD1-210ENST00000521646 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
CSMD1-210ENST00000521646 SENP3-EIF4A1A0A087X0R7 540 aa15.51■□□□□ 0.07
CSMD1-210ENST00000521646 TMF1P82094 1093 aa15.51■□□□□ 0.07
CSMD1-210ENST00000521646 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
CSMD1-210ENST00000521646 CGNL1Q0VF96 1302 aa15.5■□□□□ 0.07
CSMD1-210ENST00000521646 PCDH11XQ9BZA7 1347 aa15.5■□□□□ 0.07
CSMD1-210ENST00000521646 PCDH11YQ9BZA8 1340 aa15.5■□□□□ 0.07
CSMD1-210ENST00000521646 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
CSMD1-210ENST00000521646 RYDENQ9NUL5 291 aaKnown RBP15.5■□□□□ 0.07
CSMD1-210ENST00000521646 ITPK1Q13572 414 aa15.49■□□□□ 0.07
CSMD1-210ENST00000521646 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
CSMD1-210ENST00000521646 LINC00116Q8NCU8 138 aa15.49■□□□□ 0.07
CSMD1-210ENST00000521646 WWC3Q9ULE0 1092 aa15.49■□□□□ 0.07
CSMD1-210ENST00000521646 SMG6Q86US8 1419 aaKnown RBP15.49■□□□□ 0.07
CSMD1-210ENST00000521646 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
CSMD1-210ENST00000521646 DOK7Q18PE1 504 aa15.48■□□□□ 0.07
CSMD1-210ENST00000521646 EYA1Q99502 592 aa15.48■□□□□ 0.07
CSMD1-210ENST00000521646 KIF24Q5T7B8 1368 aa15.48■□□□□ 0.07
CSMD1-210ENST00000521646 ASAP1Q9ULH1 1129 aa15.47■□□□□ 0.07
CSMD1-210ENST00000521646 ADCY9O60503 1353 aa15.47■□□□□ 0.07
CSMD1-210ENST00000521646 ATP10DQ9P241 1426 aa15.46■□□□□ 0.07
CSMD1-210ENST00000521646 HOXB3P14651 431 aaPredicted RBP15.46■□□□□ 0.07
CSMD1-210ENST00000521646 MARVELD3Q96A59 401 aa15.46■□□□□ 0.07
CSMD1-210ENST00000521646 SLC4A9Q96Q91 983 aa15.46■□□□□ 0.07
CSMD1-210ENST00000521646 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
CSMD1-210ENST00000521646 PHF14O94880 888 aa15.45■□□□□ 0.06
CSMD1-210ENST00000521646 WASHC2AQ641Q2 1341 aa15.44■□□□□ 0.06
CSMD1-210ENST00000521646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
CSMD1-210ENST00000521646 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
CSMD1-210ENST00000521646 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
CSMD1-210ENST00000521646 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
CSMD1-210ENST00000521646 SIK1P57059 783 aa15.43■□□□□ 0.06
CSMD1-210ENST00000521646 TMC2Q8TDI7 906 aa15.43■□□□□ 0.06
CSMD1-210ENST00000521646 KDRP35968 1356 aa15.43■□□□□ 0.06
CSMD1-210ENST00000521646 C2orf72A6NCS6 295 aa15.42■□□□□ 0.06
CSMD1-210ENST00000521646 RIMBP2O15034 1052 aa15.42■□□□□ 0.06
CSMD1-210ENST00000521646 PHKG2P15735 406 aa15.42■□□□□ 0.06
CSMD1-210ENST00000521646 EIF4A2Q14240 407 aaKnown RBP15.42■□□□□ 0.06
CSMD1-210ENST00000521646 ATG3Q9NT62 314 aa15.42■□□□□ 0.06
CSMD1-210ENST00000521646 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
CSMD1-210ENST00000521646 KDM6AO15550 1401 aaPredicted RBP15.41■□□□□ 0.06
CSMD1-210ENST00000521646 IGSF1Q8N6C5 1336 aa15.41■□□□□ 0.06
CSMD1-210ENST00000521646 COL5A3P25940 1745 aaPredicted RBP15.4■□□□□ 0.06
CSMD1-210ENST00000521646 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
CSMD1-210ENST00000521646 TNNT2P45379 298 aaPredicted RBP15.4■□□□□ 0.06
CSMD1-210ENST00000521646 AK7Q96M32 723 aa15.4■□□□□ 0.06
CSMD1-210ENST00000521646 KIF13BQ9NQT8 1826 aa15.4■□□□□ 0.06
CSMD1-210ENST00000521646 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
CSMD1-210ENST00000521646 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
CSMD1-210ENST00000521646 EMP3P54852 163 aa15.39■□□□□ 0.05
CSMD1-210ENST00000521646 PCDH10Q9P2E7 1040 aa15.39■□□□□ 0.05
CSMD1-210ENST00000521646 PXDNLA1KZ92 1463 aa15.39■□□□□ 0.05
CSMD1-210ENST00000521646 CICQ96RK0 1608 aaPredicted RBP15.39■□□□□ 0.05
CSMD1-210ENST00000521646 GRIN3BO60391 1043 aa15.38■□□□□ 0.05
CSMD1-210ENST00000521646 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
CSMD1-210ENST00000521646 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
CSMD1-210ENST00000521646 GNPATO15228 680 aa15.37■□□□□ 0.05
CSMD1-210ENST00000521646 GTPBP6O43824 516 aaPredicted RBP15.37■□□□□ 0.05
CSMD1-210ENST00000521646 SSFA2P28290 1259 aa15.37■□□□□ 0.05
CSMD1-210ENST00000521646 AEBP1Q8IUX7 1158 aa15.37■□□□□ 0.05
CSMD1-210ENST00000521646 ZNF526Q8TF50 670 aaPredicted RBP15.37■□□□□ 0.05
CSMD1-210ENST00000521646 SPG7Q9UQ90 795 aa15.37■□□□□ 0.05
CSMD1-210ENST00000521646 KIF3CO14782 793 aa15.36■□□□□ 0.05
CSMD1-210ENST00000521646 ATP6V1AP38606 617 aa15.36■□□□□ 0.05
CSMD1-210ENST00000521646 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
CSMD1-210ENST00000521646 CDCA8Q53HL2 280 aa15.36■□□□□ 0.05
CSMD1-210ENST00000521646 FLAD1Q8NFF5 587 aa15.36■□□□□ 0.05
CSMD1-210ENST00000521646 TMOD3Q9NYL9 352 aa15.36■□□□□ 0.05
CSMD1-210ENST00000521646 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
CSMD1-210ENST00000521646 ADAMTS7Q9UKP4 1686 aa15.35■□□□□ 0.05
CSMD1-210ENST00000521646 BRCA1P38398 1863 aaKnown RBP15.35■□□□□ 0.05
CSMD1-210ENST00000521646 MMP10P09238 476 aa15.34■□□□□ 0.05
CSMD1-210ENST00000521646 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
CSMD1-210ENST00000521646 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
CSMD1-210ENST00000521646 TJP1Q07157 1748 aa15.34■□□□□ 0.05
CSMD1-210ENST00000521646 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
CSMD1-210ENST00000521646 HOXB1P14653 301 aaPredicted RBP15.33■□□□□ 0.04
CSMD1-210ENST00000521646 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
CSMD1-210ENST00000521646 A0A0G2JLW4 131 aa15.31■□□□□ 0.04
CSMD1-210ENST00000521646 FAM205CA6NFA0 338 aa15.31■□□□□ 0.04
CSMD1-210ENST00000521646 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
CSMD1-210ENST00000521646 GYS1P13807 737 aa15.31■□□□□ 0.04
CSMD1-210ENST00000521646 ARHGEF1Q92888 912 aaKnown RBP15.31■□□□□ 0.04
CSMD1-210ENST00000521646 PANK3Q9H999 370 aa15.31■□□□□ 0.04
CSMD1-210ENST00000521646 KCNA3P22001 575 aa15.3■□□□□ 0.04
CSMD1-210ENST00000521646 GPBP1L1Q9HC44 474 aaPredicted RBP15.3■□□□□ 0.04
CSMD1-210ENST00000521646 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
CSMD1-210ENST00000521646 SRP68Q9UHB9 627 aaKnown RBP15.29■□□□□ 0.04
CSMD1-210ENST00000521646 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
CSMD1-210ENST00000521646 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
CSMD1-210ENST00000521646 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.04
CSMD1-210ENST00000521646 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
CSMD1-210ENST00000521646 DPEP1P16444 411 aa15.27■□□□□ 0.04
CSMD1-210ENST00000521646 DDR1Q08345 913 aa15.27■□□□□ 0.04
CSMD1-210ENST00000521646 ZNF530Q6P9A1 599 aaPredicted RBP15.27■□□□□ 0.04
CSMD1-210ENST00000521646 DCAF5Q96JK2 942 aa15.27■□□□□ 0.04
CSMD1-210ENST00000521646 PLSCR2Q9NRY7 297 aa15.27■□□□□ 0.04
CSMD1-210ENST00000521646 PLEKHG2Q9H7P9 1386 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms