RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 DDR1Q08345 913 aa11.72□□□□□ -0.53
NPIPB3-205ENST00000521589 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
NPIPB3-205ENST00000521589 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
NPIPB3-205ENST00000521589 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
NPIPB3-205ENST00000521589 ZPR1O75312 459 aa11.71□□□□□ -0.53
NPIPB3-205ENST00000521589 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.53
NPIPB3-205ENST00000521589 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
NPIPB3-205ENST00000521589 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
NPIPB3-205ENST00000521589 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
NPIPB3-205ENST00000521589 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
NPIPB3-205ENST00000521589 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
NPIPB3-205ENST00000521589 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
NPIPB3-205ENST00000521589 DPEP1P16444 411 aa11.69□□□□□ -0.54
NPIPB3-205ENST00000521589 KCNA3P22001 575 aa11.69□□□□□ -0.54
NPIPB3-205ENST00000521589 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
NPIPB3-205ENST00000521589 BRCA1P38398 1863 aaKnown RBP11.69□□□□□ -0.54
NPIPB3-205ENST00000521589 A0A087WZG4 1122 aa11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 IL6STP40189 918 aaPredicted RBP11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 NFIXQ14938 502 aa11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 MCM10Q7L590 875 aa11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 N4BP2Q86UW6 1770 aaPredicted RBP11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 NRXN2Q9P2S2 1712 aa11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 ATP10DQ9P241 1426 aa11.68□□□□□ -0.54
NPIPB3-205ENST00000521589 KCNQ3O43525 872 aa11.67□□□□□ -0.54
NPIPB3-205ENST00000521589 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
NPIPB3-205ENST00000521589 RALBP1Q15311 655 aa11.67□□□□□ -0.54
NPIPB3-205ENST00000521589 WWC3Q9ULE0 1092 aa11.67□□□□□ -0.54
NPIPB3-205ENST00000521589 CEP350Q5VT06 3117 aa11.67□□□□□ -0.54
NPIPB3-205ENST00000521589 SCN7AQ01118 1682 aa11.66□□□□□ -0.54
NPIPB3-205ENST00000521589 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
NPIPB3-205ENST00000521589 NEFMP07197 916 aa11.65□□□□□ -0.54
NPIPB3-205ENST00000521589 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
NPIPB3-205ENST00000521589 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
NPIPB3-205ENST00000521589 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
NPIPB3-205ENST00000521589 NFE2L2Q16236 605 aa11.65□□□□□ -0.54
NPIPB3-205ENST00000521589 PIM2Q9P1W9 311 aa11.65□□□□□ -0.54
NPIPB3-205ENST00000521589 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.55
NPIPB3-205ENST00000521589 ARFGEF1Q9Y6D6 1849 aa11.65□□□□□ -0.55
NPIPB3-205ENST00000521589 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 A1BGP04217 495 aa11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 SERPINB2P05120 415 aa11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 USP16Q9Y5T5 823 aa11.64□□□□□ -0.55
NPIPB3-205ENST00000521589 RGL2O15211 777 aa11.63□□□□□ -0.55
NPIPB3-205ENST00000521589 CAMTA2O94983 1202 aa11.63□□□□□ -0.55
NPIPB3-205ENST00000521589 CHRNA5P30532 468 aa11.63□□□□□ -0.55
NPIPB3-205ENST00000521589 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 DLG5Q8TDM6 1919 aa11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 DDX10Q13206 875 aaKnown RBP11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
NPIPB3-205ENST00000521589 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 GPBP1L1Q9HC44 474 aaPredicted RBP11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 DLEC1Q9Y238 1755 aa11.61□□□□□ -0.55
NPIPB3-205ENST00000521589 BICDL1Q6ZP65 573 aa11.6□□□□□ -0.55
NPIPB3-205ENST00000521589 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
NPIPB3-205ENST00000521589 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
NPIPB3-205ENST00000521589 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 SETDB2Q96T68 719 aa11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 ANKRD31Q8N7Z5 1873 aa11.59□□□□□ -0.55
NPIPB3-205ENST00000521589 H0YIN7 160 aa11.58□□□□□ -0.56
NPIPB3-205ENST00000521589 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
NPIPB3-205ENST00000521589 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
NPIPB3-205ENST00000521589 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
NPIPB3-205ENST00000521589 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
NPIPB3-205ENST00000521589 ZNF652Q9Y2D9 606 aa11.58□□□□□ -0.56
NPIPB3-205ENST00000521589 KIF3CO14782 793 aa11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 PDE6BP35913 854 aa11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 ZNF526Q8TF50 670 aaPredicted RBP11.57□□□□□ -0.56
NPIPB3-205ENST00000521589 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
NPIPB3-205ENST00000521589 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
NPIPB3-205ENST00000521589 RIPK4P57078 832 aa11.56□□□□□ -0.56
NPIPB3-205ENST00000521589 PRKRIP1Q9H875 184 aaPredicted RBP11.56□□□□□ -0.56
NPIPB3-205ENST00000521589 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
NPIPB3-205ENST00000521589 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
NPIPB3-205ENST00000521589 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms