RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 AMER1Q5JTC6 1135 aaPredicted RBP25.37■■□□□ 1.65
SNHG6-204ENST00000521127 C16orf71Q8IYS4 520 aaPredicted RBP25.37■■□□□ 1.65
SNHG6-204ENST00000521127 RRAGCQ9HB90 399 aa25.37■■□□□ 1.65
SNHG6-204ENST00000521127 KDM2BQ8NHM5 1336 aa25.37■■□□□ 1.65
SNHG6-204ENST00000521127 MRC1P22897 1456 aa25.36■■□□□ 1.65
SNHG6-204ENST00000521127 AFDNP55196 1824 aaKnown RBP25.36■■□□□ 1.65
SNHG6-204ENST00000521127 HMOX1P09601 288 aa25.35■■□□□ 1.65
SNHG6-204ENST00000521127 FSTL1Q12841 308 aa25.35■■□□□ 1.65
SNHG6-204ENST00000521127 BCL2L12Q9HB09 334 aa25.35■■□□□ 1.65
SNHG6-204ENST00000521127 NARFQ9UHQ1 456 aa25.35■■□□□ 1.65
SNHG6-204ENST00000521127 ZBTB1Q9Y2K1 713 aa25.35■■□□□ 1.65
SNHG6-204ENST00000521127 RASSF7Q02833 373 aa25.34■■□□□ 1.65
SNHG6-204ENST00000521127 VIRMAQ69YN4 1812 aaKnown RBP25.34■■□□□ 1.65
SNHG6-204ENST00000521127 COL15A1P39059 1388 aa25.32■■□□□ 1.64
SNHG6-204ENST00000521127 NRXN2Q9P2S2 1712 aa25.32■■□□□ 1.64
SNHG6-204ENST00000521127 PRELPP51888 382 aa25.32■■□□□ 1.64
SNHG6-204ENST00000521127 MTHFSDQ2M296 383 aaKnown RBP25.32■■□□□ 1.64
SNHG6-204ENST00000521127 KLRG1Q96E93 195 aa25.32■■□□□ 1.64
SNHG6-204ENST00000521127 SERPINB2P05120 415 aa25.3■■□□□ 1.64
SNHG6-204ENST00000521127 TNRC6CQ9HCJ0 1690 aaKnown RBP25.29■■□□□ 1.64
SNHG6-204ENST00000521127 VSIG10Q8N0Z9 540 aa25.28■■□□□ 1.64
SNHG6-204ENST00000521127 JMYQ8N9B5 988 aa25.28■■□□□ 1.64
SNHG6-204ENST00000521127 DLEC1Q9Y238 1755 aa25.27■■□□□ 1.64
SNHG6-204ENST00000521127 CARMIL3Q8ND23 1372 aa25.27■■□□□ 1.64
SNHG6-204ENST00000521127 LMNB1P20700 586 aa25.26■■□□□ 1.63
SNHG6-204ENST00000521127 CANXP27824 592 aaKnown RBP25.26■■□□□ 1.63
SNHG6-204ENST00000521127 TTLL6Q8N841 843 aa25.26■■□□□ 1.63
SNHG6-204ENST00000521127 C2CD5Q86YS7 1000 aa25.25■■□□□ 1.63
SNHG6-204ENST00000521127 ZC3H4Q9UPT8 1303 aaKnown RBP25.25■■□□□ 1.63
SNHG6-204ENST00000521127 UBR2Q8IWV8 1755 aa25.25■■□□□ 1.63
SNHG6-204ENST00000521127 KIF7Q2M1P5 1343 aa25.24■■□□□ 1.63
SNHG6-204ENST00000521127 SMC1BQ8NDV3 1235 aa25.24■■□□□ 1.63
SNHG6-204ENST00000521127 CCDC88AQ3V6T2 1871 aa25.23■■□□□ 1.63
SNHG6-204ENST00000521127 GLTPD2A6NH11 291 aa25.23■■□□□ 1.63
SNHG6-204ENST00000521127 PER1O15534 1290 aaPredicted RBP25.23■■□□□ 1.63
SNHG6-204ENST00000521127 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
SNHG6-204ENST00000521127 EIF5P55010 431 aaKnown RBP25.23■■□□□ 1.63
SNHG6-204ENST00000521127 BICDL1Q6ZP65 573 aa25.23■■□□□ 1.63
SNHG6-204ENST00000521127 NFKBIEO00221 500 aa25.22■■□□□ 1.63
SNHG6-204ENST00000521127 H0YIN7 160 aa25.21■■□□□ 1.63
SNHG6-204ENST00000521127 COL13A1Q5TAT6 717 aaPredicted RBP25.21■■□□□ 1.63
SNHG6-204ENST00000521127 STARD3NLO95772 234 aa25.2■■□□□ 1.62
SNHG6-204ENST00000521127 VEGFAP15692 232 aaPredicted RBP25.2■■□□□ 1.62
SNHG6-204ENST00000521127 ZNF496Q96IT1 587 aaPredicted RBP25.2■■□□□ 1.62
SNHG6-204ENST00000521127 CC2D1BQ5T0F9 858 aaKnown RBP25.19■■□□□ 1.62
SNHG6-204ENST00000521127 TBC1D9BQ66K14 1250 aa25.19■■□□□ 1.62
SNHG6-204ENST00000521127 TTC5Q8N0Z6 440 aa25.19■■□□□ 1.62
SNHG6-204ENST00000521127 ANKRD31Q8N7Z5 1873 aa25.19■■□□□ 1.62
SNHG6-204ENST00000521127 A0A087WZG4 1122 aa25.18■■□□□ 1.62
SNHG6-204ENST00000521127 IL17REQ8NFR9 667 aa25.18■■□□□ 1.62
SNHG6-204ENST00000521127 TIAM2Q8IVF5 1701 aa25.17■■□□□ 1.62
SNHG6-204ENST00000521127 POTECB2RU33 542 aa25.17■■□□□ 1.62
SNHG6-204ENST00000521127 CCDC24Q8N4L8 307 aa25.17■■□□□ 1.62
SNHG6-204ENST00000521127 COL3A1P02461 1466 aaPredicted RBP25.16■■□□□ 1.62
SNHG6-204ENST00000521127 ZNF790Q6PG37 636 aa25.16■■□□□ 1.62
SNHG6-204ENST00000521127 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
SNHG6-204ENST00000521127 HEG1Q9ULI3 1381 aa25.16■■□□□ 1.62
SNHG6-204ENST00000521127 PRR5LQ6MZQ0 368 aa25.15■■□□□ 1.62
SNHG6-204ENST00000521127 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
SNHG6-204ENST00000521127 ZNF622Q969S3 477 aaKnown RBP eCLIP25.15■■□□□ 1.62
SNHG6-204ENST00000521127 BRIP1Q9BX63 1249 aa25.14■■□□□ 1.62
SNHG6-204ENST00000521127 ZNF219Q9P2Y4 722 aaPredicted RBP25.14■■□□□ 1.62
SNHG6-204ENST00000521127 PCNTO95613 3336 aa25.14■■□□□ 1.61
SNHG6-204ENST00000521127 GNAT3A8MTJ3 354 aa25.13■■□□□ 1.61
SNHG6-204ENST00000521127 C21orf2O43822 256 aa25.13■■□□□ 1.61
SNHG6-204ENST00000521127 TEFQ10587 303 aa25.13■■□□□ 1.61
SNHG6-204ENST00000521127 SCN7AQ01118 1682 aa25.13■■□□□ 1.61
SNHG6-204ENST00000521127 SIPA1L3O60292 1781 aaPredicted RBP25.13■■□□□ 1.61
SNHG6-204ENST00000521127 COL11A2P13942 1736 aaPredicted RBP25.12■■□□□ 1.61
SNHG6-204ENST00000521127 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
SNHG6-204ENST00000521127 PDE6BP35913 854 aa25.12■■□□□ 1.61
SNHG6-204ENST00000521127 TEX13AQ9BXU3 409 aaPredicted RBP25.12■■□□□ 1.61
SNHG6-204ENST00000521127 ZNF330Q9Y3S2 320 aaPredicted RBP25.12■■□□□ 1.61
SNHG6-204ENST00000521127 FER1L6Q2WGJ9 1857 aa25.11■■□□□ 1.61
SNHG6-204ENST00000521127 A1BGP04217 495 aa25.11■■□□□ 1.61
SNHG6-204ENST00000521127 IL6STP40189 918 aaPredicted RBP25.11■■□□□ 1.61
SNHG6-204ENST00000521127 GAS2L2Q8NHY3 880 aa25.11■■□□□ 1.61
SNHG6-204ENST00000521127 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
SNHG6-204ENST00000521127 DICER1Q9UPY3 1922 aaKnown RBP25.1■■□□□ 1.61
SNHG6-204ENST00000521127 KCNQ3O43525 872 aa25.09■■□□□ 1.61
SNHG6-204ENST00000521127 CAMTA2O94983 1202 aa25.09■■□□□ 1.61
SNHG6-204ENST00000521127 CNGB1Q14028 1251 aaPredicted RBP25.08■■□□□ 1.61
SNHG6-204ENST00000521127 ERFEQ4G0M1 354 aa25.08■■□□□ 1.61
SNHG6-204ENST00000521127 DPY19L2Q6NUT2 758 aa25.08■■□□□ 1.61
SNHG6-204ENST00000521127 FMNL2Q96PY5 1086 aa25.08■■□□□ 1.61
SNHG6-204ENST00000521127 SLX4Q8IY92 1834 aa25.07■■□□□ 1.6
SNHG6-204ENST00000521127 CEMIPQ8WUJ3 1361 aa25.06■■□□□ 1.6
SNHG6-204ENST00000521127 NPC1L1Q9UHC9 1359 aa25.06■■□□□ 1.6
SNHG6-204ENST00000521127 PHACTR3Q96KR7 559 aa25.06■■□□□ 1.6
SNHG6-204ENST00000521127 SETDB2Q96T68 719 aa25.06■■□□□ 1.6
SNHG6-204ENST00000521127 LTBP3Q9NS15 1303 aa25.06■■□□□ 1.6
SNHG6-204ENST00000521127 TNS4Q8IZW8 715 aa25.05■■□□□ 1.6
SNHG6-204ENST00000521127 CNBD1Q8NA66 436 aa25.05■■□□□ 1.6
SNHG6-204ENST00000521127 HSPA1AP0DMV8 641 aaKnown RBP25.04■■□□□ 1.6
SNHG6-204ENST00000521127 HSPA1BP0DMV9 641 aaKnown RBP25.04■■□□□ 1.6
SNHG6-204ENST00000521127 SRGNP10124 158 aa25.04■■□□□ 1.6
SNHG6-204ENST00000521127 USP16Q9Y5T5 823 aa25.04■■□□□ 1.6
SNHG6-204ENST00000521127 CAPN15O75808 1086 aa25.03■■□□□ 1.6
SNHG6-204ENST00000521127 PIP4K2AP48426 406 aaPredicted RBP25.03■■□□□ 1.6
SNHG6-204ENST00000521127 STYK1Q6J9G0 422 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms