RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 AACSQ86V21 672 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 KIF1BPQ96EK5 621 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 CCDC8Q9H0W5 538 aaPredicted RBP13.85□□□□□ -0.19
CLK4-206ENST00000520878 HYPKQ9NX55 129 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 KAT6BQ8WYB5 2073 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 KSR2Q6VAB6 950 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
CLK4-206ENST00000520878 ERBB3P21860 1342 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 MCM4P33991 863 aa13.85□□□□□ -0.19
CLK4-206ENST00000520878 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
CLK4-206ENST00000520878 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
CLK4-206ENST00000520878 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
CLK4-206ENST00000520878 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
CLK4-206ENST00000520878 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
CLK4-206ENST00000520878 KLHDC4Q8TBB5 520 aa13.83□□□□□ -0.2
CLK4-206ENST00000520878 CCDC85AQ96PX6 553 aaPredicted RBP13.83□□□□□ -0.2
CLK4-206ENST00000520878 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
CLK4-206ENST00000520878 TRAK2O60296 914 aa13.83□□□□□ -0.2
CLK4-206ENST00000520878 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.2
CLK4-206ENST00000520878 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
CLK4-206ENST00000520878 LARP1Q6PKG0 1096 aaKnown RBP13.82□□□□□ -0.2
CLK4-206ENST00000520878 CNTROBQ8N137 903 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 FMNL2Q96PY5 1086 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
CLK4-206ENST00000520878 ZBTB3Q9H5J0 574 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 SLC52A2Q9HAB3 445 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 GRM8O00222 908 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 SNRPA1P09661 255 aaKnown RBP13.81□□□□□ -0.2
CLK4-206ENST00000520878 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
CLK4-206ENST00000520878 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
CLK4-206ENST00000520878 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 PHKG2P15735 406 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 BOLA2Q9H3K6 86 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLK4-206ENST00000520878 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
CLK4-206ENST00000520878 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
CLK4-206ENST00000520878 A0A087WZG4 1122 aa13.8□□□□□ -0.2
CLK4-206ENST00000520878 SSFA2P28290 1259 aa13.8□□□□□ -0.2
CLK4-206ENST00000520878 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
CLK4-206ENST00000520878 TNPO1Q92973 898 aaKnown RBP13.8□□□□□ -0.2
CLK4-206ENST00000520878 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
CLK4-206ENST00000520878 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
CLK4-206ENST00000520878 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 TAF7LQ5H9L4 462 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 LINS1Q8NG48 757 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
CLK4-206ENST00000520878 GOLGA6L3A6NEY3 463 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 BICC1Q9H694 974 aaKnown RBP13.79□□□□□ -0.2
CLK4-206ENST00000520878 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
CLK4-206ENST00000520878 C1orf167Q5SNV9 1468 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 HOXB7P09629 217 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 ESYT1Q9BSJ8 1104 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 FSD1Q9BTV5 496 aa13.79□□□□□ -0.2
CLK4-206ENST00000520878 FGD1P98174 961 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
CLK4-206ENST00000520878 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 SSH3Q8TE77 659 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 SUCLG2Q96I99 432 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 PEAK1Q9H792 1746 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
CLK4-206ENST00000520878 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.2
CLK4-206ENST00000520878 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.2
CLK4-206ENST00000520878 ADAMTS2O95450 1211 aa13.77□□□□□ -0.2
CLK4-206ENST00000520878 CHMLP26374 656 aa13.77□□□□□ -0.2
CLK4-206ENST00000520878 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.2
CLK4-206ENST00000520878 SNX21Q969T3 373 aa13.77□□□□□ -0.2
CLK4-206ENST00000520878 CYP27B1O15528 508 aa13.77□□□□□ -0.21
CLK4-206ENST00000520878 ALDH1L1O75891 902 aa13.77□□□□□ -0.21
CLK4-206ENST00000520878 RUFY2Q8WXA3 655 aa13.77□□□□□ -0.21
CLK4-206ENST00000520878 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
CLK4-206ENST00000520878 DTNBO60941 627 aa13.77□□□□□ -0.21
CLK4-206ENST00000520878 BRINP3Q76B58 766 aa13.77□□□□□ -0.21
CLK4-206ENST00000520878 GLRX3O76003 335 aaKnown RBP13.76□□□□□ -0.21
CLK4-206ENST00000520878 A1BGP04217 495 aa13.76□□□□□ -0.21
CLK4-206ENST00000520878 ERC1Q8IUD2 1116 aa13.76□□□□□ -0.21
CLK4-206ENST00000520878 RGS12O14924 1447 aa13.76□□□□□ -0.21
CLK4-206ENST00000520878 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
CLK4-206ENST00000520878 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
CLK4-206ENST00000520878 ECHDC1Q9NTX5 307 aa13.76□□□□□ -0.21
CLK4-206ENST00000520878 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
CLK4-206ENST00000520878 DLG5Q8TDM6 1919 aa13.75□□□□□ -0.21
CLK4-206ENST00000520878 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
CLK4-206ENST00000520878 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
CLK4-206ENST00000520878 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
CLK4-206ENST00000520878 L1TD1Q5T7N2 865 aaKnown RBP13.74□□□□□ -0.21
CLK4-206ENST00000520878 IL2RBP14784 551 aa13.74□□□□□ -0.21
CLK4-206ENST00000520878 NUCB2P80303 420 aa13.74□□□□□ -0.21
CLK4-206ENST00000520878 PIP4K2BP78356 416 aa13.74□□□□□ -0.21
CLK4-206ENST00000520878 KIF2CQ99661 725 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms