RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 LUZP1Q86V48 1076 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 MYO3AQ8NEV4 1616 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 KRT85P78386 507 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 STK3Q13188 491 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 FOSBP53539 338 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 SNX14Q9Y5W7 946 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 POGZQ7Z3K3 1410 aa15.29■□□□□ 0.04
TRAPPC9-208ENST00000520857 CCDC112Q8NEF3 446 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 GOLGA6L19H0YKK7 550 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 TNNT1P13805 278 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 CEBPZQ03701 1054 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 VWDEQ8N2E2 1590 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 IL25Q9H293 177 aa15.28■□□□□ 0.04
TRAPPC9-208ENST00000520857 DEPDC5O75140 1603 aa15.27■□□□□ 0.04
TRAPPC9-208ENST00000520857 HSPA4P34932 840 aa15.27■□□□□ 0.04
TRAPPC9-208ENST00000520857 RGS12O14924 1447 aa15.27■□□□□ 0.03
TRAPPC9-208ENST00000520857 HDGFL1Q5TGJ6 251 aa15.27■□□□□ 0.03
TRAPPC9-208ENST00000520857 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.03
TRAPPC9-208ENST00000520857 LRMPQ12912 555 aa15.27■□□□□ 0.03
TRAPPC9-208ENST00000520857 CDK11BP21127 795 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 IFIT2P09913 472 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 RUFY3Q7L099 469 aa15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 CGNQ9P2M7 1197 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 USP32Q8NFA0 1604 aa15.26■□□□□ 0.03
TRAPPC9-208ENST00000520857 BECN2A8MW95 431 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 FAM200AQ8TCP9 573 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 V9GYY5 206 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 GTPBP4Q9BZE4 634 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 ABCC3O15438 1527 aa15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-208ENST00000520857 LARGE1O95461 756 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 TYRO3Q06418 890 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 FILIP1Q7Z7B0 1213 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 H3BQV1 296 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 IFFO2Q5TF58 517 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 SGSM2O43147 1006 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 NGDNQ8NEJ9 315 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
TRAPPC9-208ENST00000520857 RAD50Q92878 1312 aa15.23■□□□□ 0.03
TRAPPC9-208ENST00000520857 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC9-208ENST00000520857 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
TRAPPC9-208ENST00000520857 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 TRMT1Q9NXH9 659 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 NRBP1Q9UHY1 535 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 ANXA1P04083 346 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 LIG1P18858 919 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 ZNF165P49910 485 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 KCNF1Q9H3M0 494 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 CD163L1Q9NR16 1453 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 UTP14CQ5TAP6 766 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 ZSCAN31Q96LW9 406 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 DNAJC25Q9H1X3 360 aa15.22■□□□□ 0.03
TRAPPC9-208ENST00000520857 MTMR6Q9Y217 621 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 KIAA0232Q92628 1395 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 PDCP20941 246 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 NAA30Q147X3 362 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 PHAXQ9H814 394 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 SPTLC3Q9NUV7 552 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 ARHGEF40Q8TER5 1519 aa15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 EDC4Q6P2E9 1401 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-208ENST00000520857 AP5Z1O43299 807 aa15.21■□□□□ 0.02
TRAPPC9-208ENST00000520857 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.02
TRAPPC9-208ENST00000520857 ERICH4A6NGS2 130 aa15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 GLRX3O76003 335 aaKnown RBP15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 TTC6Q86TZ1 520 aa15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 USP44Q9H0E7 712 aa15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 ARHGAP31Q2M1Z3 1444 aa15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-208ENST00000520857 BLOC1S2Q6QNY1 142 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms