RNA–Protein interactions for RNA: ENST00000520642.5

ERGIC1-209, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-209ENST00000520642 NMRK2Q9NPI5 230 aa20.68■□□□□ 0.9
ERGIC1-209ENST00000520642 POLRMTO00411 1230 aaKnown RBP20.67■□□□□ 0.9
ERGIC1-209ENST00000520642 RNMTO43148 476 aaKnown RBP20.67■□□□□ 0.9
ERGIC1-209ENST00000520642 SOS1Q07889 1333 aaPredicted RBP20.67■□□□□ 0.9
ERGIC1-209ENST00000520642 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
ERGIC1-209ENST00000520642 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.9
ERGIC1-209ENST00000520642 DNAJC10Q8IXB1 793 aa20.66■□□□□ 0.9
ERGIC1-209ENST00000520642 LGR6Q9HBX8 967 aa20.66■□□□□ 0.9
ERGIC1-209ENST00000520642 RNF181Q9P0P0 153 aa20.66■□□□□ 0.9
ERGIC1-209ENST00000520642 ZC3H4Q9UPT8 1303 aaKnown RBP20.66■□□□□ 0.9
ERGIC1-209ENST00000520642 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
ERGIC1-209ENST00000520642 COL15A1P39059 1388 aa20.65■□□□□ 0.9
ERGIC1-209ENST00000520642 TM4SF1P30408 202 aa20.65■□□□□ 0.9
ERGIC1-209ENST00000520642 FSTL1Q12841 308 aa20.65■□□□□ 0.9
ERGIC1-209ENST00000520642 USPL1Q5W0Q7 1092 aa20.65■□□□□ 0.9
ERGIC1-209ENST00000520642 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
ERGIC1-209ENST00000520642 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.89
ERGIC1-209ENST00000520642 NARFQ9UHQ1 456 aa20.64■□□□□ 0.89
ERGIC1-209ENST00000520642 GNAT3A8MTJ3 354 aa20.63■□□□□ 0.89
ERGIC1-209ENST00000520642 CYP19A1P11511 503 aaPredicted RBP20.63■□□□□ 0.89
ERGIC1-209ENST00000520642 CHRNA5P30532 468 aa20.63■□□□□ 0.89
ERGIC1-209ENST00000520642 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
ERGIC1-209ENST00000520642 WDR90Q96KV7 1748 aa20.62■□□□□ 0.89
ERGIC1-209ENST00000520642 KCPQ6ZWJ8 1503 aa20.62■□□□□ 0.89
ERGIC1-209ENST00000520642 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
ERGIC1-209ENST00000520642 NEFMP07197 916 aa20.61■□□□□ 0.89
ERGIC1-209ENST00000520642 TEFQ10587 303 aa20.61■□□□□ 0.89
ERGIC1-209ENST00000520642 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
ERGIC1-209ENST00000520642 RSPH6AQ9H0K4 717 aa20.61■□□□□ 0.89
ERGIC1-209ENST00000520642 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
ERGIC1-209ENST00000520642 NRXN2Q9P2S2 1712 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 SBF1O95248 1867 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 A0A087WZG4 1122 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 STARD3NLO95772 234 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 SLC39A6Q13433 755 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 NFIXQ14938 502 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 ZBTB1Q9Y2K1 713 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 DLEC1Q9Y238 1755 aa20.59■□□□□ 0.89
ERGIC1-209ENST00000520642 LMNB1P20700 586 aa20.58■□□□□ 0.89
ERGIC1-209ENST00000520642 DNAJC5GQ8N7S2 189 aa20.58■□□□□ 0.89
ERGIC1-209ENST00000520642 SMC1BQ8NDV3 1235 aa20.58■□□□□ 0.89
ERGIC1-209ENST00000520642 UBR2Q8IWV8 1755 aa20.58■□□□□ 0.89
ERGIC1-209ENST00000520642 SERPINB2P05120 415 aa20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 RALBP1Q15311 655 aa20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 TTLL6Q8N841 843 aa20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 RTF1Q92541 710 aaKnown RBP20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 PHACTR3Q96KR7 559 aa20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 PDZRN3Q9UPQ7 1066 aa20.57■□□□□ 0.88
ERGIC1-209ENST00000520642 TEX13AQ9BXU3 409 aaPredicted RBP20.56■□□□□ 0.88
ERGIC1-209ENST00000520642 H0YIN7 160 aa20.55■□□□□ 0.88
ERGIC1-209ENST00000520642 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
ERGIC1-209ENST00000520642 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
ERGIC1-209ENST00000520642 KLRG1Q96E93 195 aa20.55■□□□□ 0.88
ERGIC1-209ENST00000520642 RRAGCQ9HB90 399 aa20.55■□□□□ 0.88
ERGIC1-209ENST00000520642 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
ERGIC1-209ENST00000520642 C2CD5Q86YS7 1000 aa20.54■□□□□ 0.88
ERGIC1-209ENST00000520642 RASSF7Q02833 373 aa20.53■□□□□ 0.88
ERGIC1-209ENST00000520642 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
ERGIC1-209ENST00000520642 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
ERGIC1-209ENST00000520642 GLTPD2A6NH11 291 aa20.51■□□□□ 0.87
ERGIC1-209ENST00000520642 VEGFAP15692 232 aaPredicted RBP20.51■□□□□ 0.87
ERGIC1-209ENST00000520642 PDE6BP35913 854 aa20.51■□□□□ 0.87
ERGIC1-209ENST00000520642 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
ERGIC1-209ENST00000520642 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
ERGIC1-209ENST00000520642 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
ERGIC1-209ENST00000520642 CARMIL3Q8ND23 1372 aa20.5■□□□□ 0.87
ERGIC1-209ENST00000520642 HEG1Q9ULI3 1381 aa20.5■□□□□ 0.87
ERGIC1-209ENST00000520642 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
ERGIC1-209ENST00000520642 BTBD11A6QL63 1104 aa20.49■□□□□ 0.87
ERGIC1-209ENST00000520642 ZNF790Q6PG37 636 aa20.49■□□□□ 0.87
ERGIC1-209ENST00000520642 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
ERGIC1-209ENST00000520642 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
ERGIC1-209ENST00000520642 IL6STP40189 918 aaPredicted RBP20.48■□□□□ 0.87
ERGIC1-209ENST00000520642 DPY19L2Q6NUT2 758 aa20.48■□□□□ 0.87
ERGIC1-209ENST00000520642 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
ERGIC1-209ENST00000520642 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
ERGIC1-209ENST00000520642 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
ERGIC1-209ENST00000520642 CEMIPQ8WUJ3 1361 aa20.47■□□□□ 0.87
ERGIC1-209ENST00000520642 NPHP1O15259 732 aa20.47■□□□□ 0.87
ERGIC1-209ENST00000520642 MCM10Q7L590 875 aa20.47■□□□□ 0.87
ERGIC1-209ENST00000520642 ZNF496Q96IT1 587 aaPredicted RBP20.47■□□□□ 0.87
ERGIC1-209ENST00000520642 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
ERGIC1-209ENST00000520642 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
ERGIC1-209ENST00000520642 ZNF622Q969S3 477 aaKnown RBP eCLIP20.46■□□□□ 0.87
ERGIC1-209ENST00000520642 SIPA1L3O60292 1781 aaPredicted RBP20.46■□□□□ 0.87
ERGIC1-209ENST00000520642 NFKBIEO00221 500 aa20.45■□□□□ 0.86
ERGIC1-209ENST00000520642 ST5P78524 1137 aa20.45■□□□□ 0.86
ERGIC1-209ENST00000520642 HTRA3P83110 453 aa20.45■□□□□ 0.86
ERGIC1-209ENST00000520642 SOGA3Q5TF21 947 aa20.45■□□□□ 0.86
ERGIC1-209ENST00000520642 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
ERGIC1-209ENST00000520642 CCDC88AQ3V6T2 1871 aa20.44■□□□□ 0.86
ERGIC1-209ENST00000520642 CNBD1Q8NA66 436 aa20.44■□□□□ 0.86
ERGIC1-209ENST00000520642 SETDB2Q96T68 719 aa20.44■□□□□ 0.86
ERGIC1-209ENST00000520642 DCTN1Q14203 1278 aa20.43■□□□□ 0.86
ERGIC1-209ENST00000520642 PRR5LQ6MZQ0 368 aa20.43■□□□□ 0.86
ERGIC1-209ENST00000520642 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
ERGIC1-209ENST00000520642 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
ERGIC1-209ENST00000520642 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms