RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 BTBD11A6QL63 1104 aa21.5■■□□□ 1.03
IGHV3-42-201ENST00000520410 FCHSD2O94868 740 aa21.5■■□□□ 1.03
IGHV3-42-201ENST00000520410 DPEP1P16444 411 aa21.5■■□□□ 1.03
IGHV3-42-201ENST00000520410 ZNF790Q6PG37 636 aa21.5■■□□□ 1.03
IGHV3-42-201ENST00000520410 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
IGHV3-42-201ENST00000520410 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
IGHV3-42-201ENST00000520410 FMNL2Q96PY5 1086 aa21.49■■□□□ 1.03
IGHV3-42-201ENST00000520410 DDR1Q08345 913 aa21.48■■□□□ 1.03
IGHV3-42-201ENST00000520410 BICDL1Q6ZP65 573 aa21.48■■□□□ 1.03
IGHV3-42-201ENST00000520410 MCM10Q7L590 875 aa21.48■■□□□ 1.03
IGHV3-42-201ENST00000520410 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
IGHV3-42-201ENST00000520410 UBR2Q8IWV8 1755 aa21.47■■□□□ 1.03
IGHV3-42-201ENST00000520410 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
IGHV3-42-201ENST00000520410 ARHGAP27Q6ZUM4 889 aa21.47■■□□□ 1.03
IGHV3-42-201ENST00000520410 GPBP1L1Q9HC44 474 aaPredicted RBP21.47■■□□□ 1.03
IGHV3-42-201ENST00000520410 NARFQ9UHQ1 456 aa21.47■■□□□ 1.03
IGHV3-42-201ENST00000520410 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
IGHV3-42-201ENST00000520410 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.03
IGHV3-42-201ENST00000520410 POLRMTO00411 1230 aaKnown RBP21.45■■□□□ 1.02
IGHV3-42-201ENST00000520410 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
IGHV3-42-201ENST00000520410 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
IGHV3-42-201ENST00000520410 A0A087WZG4 1122 aa21.44■■□□□ 1.02
IGHV3-42-201ENST00000520410 NPHP1O15259 732 aa21.44■■□□□ 1.02
IGHV3-42-201ENST00000520410 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
IGHV3-42-201ENST00000520410 KCNQ3O43525 872 aa21.43■■□□□ 1.02
IGHV3-42-201ENST00000520410 CHRNA5P30532 468 aa21.43■■□□□ 1.02
IGHV3-42-201ENST00000520410 NFIXQ14938 502 aa21.43■■□□□ 1.02
IGHV3-42-201ENST00000520410 PIM2Q9P1W9 311 aa21.43■■□□□ 1.02
IGHV3-42-201ENST00000520410 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
IGHV3-42-201ENST00000520410 SIPA1L3O60292 1781 aaPredicted RBP21.42■■□□□ 1.02
IGHV3-42-201ENST00000520410 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
IGHV3-42-201ENST00000520410 SERPINB2P05120 415 aa21.41■■□□□ 1.02
IGHV3-42-201ENST00000520410 TM4SF1P30408 202 aa21.41■■□□□ 1.02
IGHV3-42-201ENST00000520410 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
IGHV3-42-201ENST00000520410 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
IGHV3-42-201ENST00000520410 UTRNP46939 3433 aa21.41■■□□□ 1.02
IGHV3-42-201ENST00000520410 A1BGP04217 495 aa21.4■■□□□ 1.02
IGHV3-42-201ENST00000520410 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.01
IGHV3-42-201ENST00000520410 EIF5P55010 431 aaKnown RBP21.38■■□□□ 1.01
IGHV3-42-201ENST00000520410 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
IGHV3-42-201ENST00000520410 BCL2L12Q9HB09 334 aa21.38■■□□□ 1.01
IGHV3-42-201ENST00000520410 IL6STP40189 918 aaPredicted RBP21.37■■□□□ 1.01
IGHV3-42-201ENST00000520410 ADCY9O60503 1353 aa21.36■■□□□ 1.01
IGHV3-42-201ENST00000520410 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
IGHV3-42-201ENST00000520410 KCNA3P22001 575 aa21.36■■□□□ 1.01
IGHV3-42-201ENST00000520410 TBC1D9BQ66K14 1250 aa21.36■■□□□ 1.01
IGHV3-42-201ENST00000520410 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
IGHV3-42-201ENST00000520410 HTATSF1O43719 755 aaKnown RBP21.35■■□□□ 1.01
IGHV3-42-201ENST00000520410 SNRPA1P09661 255 aaKnown RBP21.35■■□□□ 1.01
IGHV3-42-201ENST00000520410 DZIP3Q86Y13 1208 aaKnown RBP21.35■■□□□ 1.01
IGHV3-42-201ENST00000520410 C2CD5Q86YS7 1000 aa21.35■■□□□ 1.01
IGHV3-42-201ENST00000520410 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
IGHV3-42-201ENST00000520410 USP16Q9Y5T5 823 aa21.35■■□□□ 1.01
IGHV3-42-201ENST00000520410 SCN7AQ01118 1682 aa21.34■■□□□ 1.01
IGHV3-42-201ENST00000520410 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
IGHV3-42-201ENST00000520410 CCDC24Q8N4L8 307 aa21.34■■□□□ 1.01
IGHV3-42-201ENST00000520410 GOLGB1Q14789 3259 aaKnown RBP21.33■■□□□ 1.01
IGHV3-42-201ENST00000520410 RALBP1Q15311 655 aa21.33■■□□□ 1.01
IGHV3-42-201ENST00000520410 AFDNP55196 1824 aaKnown RBP21.33■■□□□ 1.01
IGHV3-42-201ENST00000520410 H0YIN7 160 aa21.32■■□□□ 1
IGHV3-42-201ENST00000520410 NFE2L2Q16236 605 aa21.32■■□□□ 1
IGHV3-42-201ENST00000520410 C9orf131Q5VYM1 1079 aa21.32■■□□□ 1
IGHV3-42-201ENST00000520410 SETDB2Q96T68 719 aa21.32■■□□□ 1
IGHV3-42-201ENST00000520410 BRCA1P38398 1863 aaKnown RBP21.32■■□□□ 1
IGHV3-42-201ENST00000520410 CARMIL3Q8ND23 1372 aa21.32■■□□□ 1
IGHV3-42-201ENST00000520410 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
IGHV3-42-201ENST00000520410 THUMPD2Q9BTF0 503 aaKnown RBP21.31■■□□□ 1
IGHV3-42-201ENST00000520410 RNF181Q9P0P0 153 aa21.31■■□□□ 1
IGHV3-42-201ENST00000520410 NGEFQ8N5V2 710 aa21.3■■□□□ 1
IGHV3-42-201ENST00000520410 CNBD1Q8NA66 436 aa21.3■■□□□ 1
IGHV3-42-201ENST00000520410 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
IGHV3-42-201ENST00000520410 ZNF219Q9P2Y4 722 aaPredicted RBP21.3■■□□□ 1
IGHV3-42-201ENST00000520410 ZNF652Q9Y2D9 606 aa21.3■■□□□ 1
IGHV3-42-201ENST00000520410 ARFGEF1Q9Y6D6 1849 aa21.29■■□□□ 1
IGHV3-42-201ENST00000520410 CAMTA2O94983 1202 aa21.29■■□□□ 1
IGHV3-42-201ENST00000520410 ST5P78524 1137 aa21.29■■□□□ 1
IGHV3-42-201ENST00000520410 RASSF7Q02833 373 aa21.28■■□□□ 1
IGHV3-42-201ENST00000520410 TTLL6Q8N841 843 aa21.28■■□□□ 1
IGHV3-42-201ENST00000520410 PLEKHF1Q96S99 279 aa21.28■■□□□ 1
IGHV3-42-201ENST00000520410 NRXN2Q9P2S2 1712 aa21.28■■□□□ 1
IGHV3-42-201ENST00000520410 FAM177BA6PVY3 158 aa21.27■■□□□ 1
IGHV3-42-201ENST00000520410 PDE6BP35913 854 aa21.27■■□□□ 1
IGHV3-42-201ENST00000520410 PRR5LQ6MZQ0 368 aa21.27■■□□□ 1
IGHV3-42-201ENST00000520410 DLG5Q8TDM6 1919 aa21.27■■□□□ 1
IGHV3-42-201ENST00000520410 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■□□□□ 0.99
IGHV3-42-201ENST00000520410 WDR43Q15061 677 aaKnown RBP eCLIP21.26■□□□□ 0.99
IGHV3-42-201ENST00000520410 NBPF5PQ86XG9 351 aaPredicted RBP21.26■□□□□ 0.99
IGHV3-42-201ENST00000520410 BCORQ6W2J9 1755 aa21.25■□□□□ 0.99
IGHV3-42-201ENST00000520410 RIPK4P57078 832 aa21.25■□□□□ 0.99
IGHV3-42-201ENST00000520410 C16orf71Q8IYS4 520 aaPredicted RBP21.25■□□□□ 0.99
IGHV3-42-201ENST00000520410 NEUROD2Q15784 382 aa21.24■□□□□ 0.99
IGHV3-42-201ENST00000520410 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
IGHV3-42-201ENST00000520410 BRIP1Q9BX63 1249 aa21.24■□□□□ 0.99
IGHV3-42-201ENST00000520410 TSPYL4Q9UJ04 414 aa21.24■□□□□ 0.99
IGHV3-42-201ENST00000520410 RRP7AQ9Y3A4 280 aaKnown RBP21.24■□□□□ 0.99
IGHV3-42-201ENST00000520410 LAMB4A4D0S4 1761 aa21.23■□□□□ 0.99
IGHV3-42-201ENST00000520410 MYL6BP14649 208 aa21.23■□□□□ 0.99
IGHV3-42-201ENST00000520410 NMRK2Q9NPI5 230 aa21.23■□□□□ 0.99
IGHV3-42-201ENST00000520410 NIP7Q9Y221 180 aaKnown RBP eCLIP21.23■□□□□ 0.99
IGHV3-42-201ENST00000520410 NBPF26B4DH59 902 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms