RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 AMOTQ4VCS5 1084 aa14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 STARD3NLO95772 234 aa14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 IGHMBP2P38935 993 aaKnown RBP14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 SOGA3Q5TF21 947 aa14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 FANCAO15360 1455 aa14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 TTC31Q49AM3 519 aaPredicted RBP14.1□□□□□ -0.15
ERGIC1-208ENST00000520399 GOLGA6L10A0A0M3HER8 536 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 ATP2B2Q01814 1243 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 PPFIBP1Q86W92 1011 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 CFAP57Q96MR6 1250 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 TANGO6Q9C0B7 1094 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 CFAP45Q9UL16 551 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 WASLO00401 505 aaPredicted RBP14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 IVLP07476 585 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 ANKRD18BA2A2Z9 1011 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 CASTP20810 708 aaKnown RBP14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 SSH1Q8WYL5 1049 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 WASF1Q92558 559 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 CBFA2T2O43439 604 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 IMMTQ16891 758 aaKnown RBP14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 RAI14Q9P0K7 980 aa14.09□□□□□ -0.15
ERGIC1-208ENST00000520399 TERF1P54274 439 aa14.08□□□□□ -0.15
ERGIC1-208ENST00000520399 SUDS3Q9H7L9 328 aaPredicted RBP14.08□□□□□ -0.15
ERGIC1-208ENST00000520399 EXOC6BQ9Y2D4 811 aa14.08□□□□□ -0.15
ERGIC1-208ENST00000520399 AKAP2Q9Y2D5 859 aa14.08□□□□□ -0.15
ERGIC1-208ENST00000520399 LARP1Q6PKG0 1096 aaKnown RBP14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 UBAC1Q9BSL1 405 aa14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 POTEJP0CG39 1038 aa14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 DENND4BO75064 1496 aaPredicted RBP14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 SHTN1A0MZ66 631 aa14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 KIF2AO00139 706 aaPredicted RBP14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 SMARCA5O60264 1052 aaPredicted RBP14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 MAP2K1Q02750 393 aaPredicted RBP14.08□□□□□ -0.16
ERGIC1-208ENST00000520399 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 MATR3P43243 847 aaKnown RBP eCLIP14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 ANAPC15P60006 121 aa14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 MYD88Q99836 296 aa14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 DISP3Q9P2K9 1392 aa14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 GLRX3O76003 335 aaKnown RBP14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 EMILIN1Q9Y6C2 1016 aa14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 EPB41L2O43491 1005 aaKnown RBP14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
ERGIC1-208ENST00000520399 BMS1Q14692 1282 aaKnown RBP14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 TICAM2Q86XR7 235 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 AIDAQ96BJ3 306 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 LRP2BPQ9P2M1 347 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 PTPRCP08575 1304 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 CETN2P41208 172 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 NUP62CLQ9H1M0 184 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 DHX29Q7Z478 1369 aaKnown RBP14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 METTL24Q5JXM2 366 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 C20orf194Q5TEA3 1177 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 A0A1B0GUL7 405 aa14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
ERGIC1-208ENST00000520399 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
ERGIC1-208ENST00000520399 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERGIC1-208ENST00000520399 TAF4BQ92750 862 aa14.05□□□□□ -0.16
ERGIC1-208ENST00000520399 UGGT2Q9NYU1 1516 aa14.05□□□□□ -0.16
ERGIC1-208ENST00000520399 IDH1O75874 414 aaKnown RBP14.05□□□□□ -0.16
ERGIC1-208ENST00000520399 PLEKHH1Q9ULM0 1364 aa14.05□□□□□ -0.16
ERGIC1-208ENST00000520399 ZHX3Q9H4I2 956 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 C14orf93Q9H972 538 aaKnown RBP14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 AMOTL2Q9Y2J4 779 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 ANKRD36BQ8N2N9 1353 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 BICDL1Q6ZP65 573 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 MICALCLQ6ZW33 695 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 PHF8Q9UPP1 1060 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 ZNF652Q9Y2D9 606 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 HOMER2Q9NSB8 354 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 PRPF40BQ6NWY9 871 aaKnown RBP14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 FILIP1Q7Z7B0 1213 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 CCDC85AQ96PX6 553 aaPredicted RBP14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 CEP131Q9UPN4 1083 aa14.04□□□□□ -0.16
ERGIC1-208ENST00000520399 SF3B2Q13435 895 aaKnown RBP14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 LRCH2Q5VUJ6 765 aa14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 UBXN4Q92575 508 aa14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 GPATCH8Q9UKJ3 1502 aaKnown RBP14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 OGFRQ9NZT2 677 aa14.03□□□□□ -0.16
ERGIC1-208ENST00000520399 SMTNL1A8MU46 457 aa14.02□□□□□ -0.16
ERGIC1-208ENST00000520399 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
ERGIC1-208ENST00000520399 PABPN1LA6NDY0 278 aaKnown RBP14.02□□□□□ -0.17
ERGIC1-208ENST00000520399 GBP3Q9H0R5 595 aa14.02□□□□□ -0.17
ERGIC1-208ENST00000520399 CCDC175P0C221 793 aa14.02□□□□□ -0.17
ERGIC1-208ENST00000520399 PIP4K2BP78356 416 aa14.02□□□□□ -0.17
ERGIC1-208ENST00000520399 IDI1Q13907 227 aa14.02□□□□□ -0.17
ERGIC1-208ENST00000520399 CCDC83Q8IWF9 413 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms