RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
TRPS1-211ENST00000520276 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
TRPS1-211ENST00000520276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRPS1-211ENST00000520276 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
TRPS1-211ENST00000520276 U2AF2P26368 475 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRPS1-211ENST00000520276 CCDC39Q9UFE4 941 aa12.31□□□□□ -0.44
TRPS1-211ENST00000520276 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
TRPS1-211ENST00000520276 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
TRPS1-211ENST00000520276 PXDNQ92626 1479 aa12.3□□□□□ -0.44
TRPS1-211ENST00000520276 ACSBG1Q96GR2 724 aa12.3□□□□□ -0.44
TRPS1-211ENST00000520276 HMGB2P26583 209 aaKnown RBP12.3□□□□□ -0.44
TRPS1-211ENST00000520276 IL13P35225 146 aa12.3□□□□□ -0.44
TRPS1-211ENST00000520276 K7ELQ4 463 aaPredicted RBP12.3□□□□□ -0.44
TRPS1-211ENST00000520276 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
TRPS1-211ENST00000520276 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 CPDO75976 1380 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 SYCE3A1L190 88 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 NPHP1O15259 732 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 WWC1Q8IX03 1113 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
TRPS1-211ENST00000520276 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
TRPS1-211ENST00000520276 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
TRPS1-211ENST00000520276 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
TRPS1-211ENST00000520276 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
TRPS1-211ENST00000520276 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
TRPS1-211ENST00000520276 PRPF40AO75400 957 aaKnown RBP12.27□□□□□ -0.44
TRPS1-211ENST00000520276 IRX5P78411 483 aaPredicted RBP12.27□□□□□ -0.44
TRPS1-211ENST00000520276 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.44
TRPS1-211ENST00000520276 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.44
TRPS1-211ENST00000520276 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRPS1-211ENST00000520276 ZNF771Q7L3S4 317 aaPredicted RBP12.27□□□□□ -0.45
TRPS1-211ENST00000520276 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.45
TRPS1-211ENST00000520276 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.45
TRPS1-211ENST00000520276 CRB1P82279 1406 aa12.27□□□□□ -0.45
TRPS1-211ENST00000520276 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
TRPS1-211ENST00000520276 PDCL2Q8N4E4 241 aa12.27□□□□□ -0.45
TRPS1-211ENST00000520276 CDK11BP21127 795 aaKnown RBP12.27□□□□□ -0.45
TRPS1-211ENST00000520276 KIF3AQ9Y496 699 aa12.27□□□□□ -0.45
TRPS1-211ENST00000520276 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
TRPS1-211ENST00000520276 SPATA31A1Q5TZJ5 1347 aa12.26□□□□□ -0.45
TRPS1-211ENST00000520276 SPATA31A5Q5VU36 1347 aa12.26□□□□□ -0.45
TRPS1-211ENST00000520276 SPATA31A7Q8IWB4 1347 aa12.26□□□□□ -0.45
TRPS1-211ENST00000520276 SSH2Q76I76 1423 aa12.26□□□□□ -0.45
TRPS1-211ENST00000520276 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
TRPS1-211ENST00000520276 PRIMPOLQ96LW4 560 aa12.26□□□□□ -0.45
TRPS1-211ENST00000520276 MVPQ14764 893 aaKnown RBP12.25□□□□□ -0.45
TRPS1-211ENST00000520276 HMGN5P82970 282 aaKnown RBP12.25□□□□□ -0.45
TRPS1-211ENST00000520276 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
TRPS1-211ENST00000520276 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
TRPS1-211ENST00000520276 GNAI1P63096 354 aa12.25□□□□□ -0.45
TRPS1-211ENST00000520276 LRSAM1Q6UWE0 723 aa12.25□□□□□ -0.45
TRPS1-211ENST00000520276 BAG6P46379 1132 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 KCNJ4P48050 445 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRPS1-211ENST00000520276 DCAF5Q96JK2 942 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 PTCD1O75127 700 aaKnown RBP12.24□□□□□ -0.45
TRPS1-211ENST00000520276 STK31Q9BXU1 1019 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 TTC12Q9H892 705 aaPredicted RBP12.24□□□□□ -0.45
TRPS1-211ENST00000520276 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
TRPS1-211ENST00000520276 MCM10Q7L590 875 aa12.24□□□□□ -0.45
TRPS1-211ENST00000520276 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-211ENST00000520276 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
TRPS1-211ENST00000520276 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-211ENST00000520276 APBA3O96018 575 aa12.23□□□□□ -0.45
TRPS1-211ENST00000520276 EIF2S2P20042 333 aaKnown RBP12.23□□□□□ -0.45
TRPS1-211ENST00000520276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRPS1-211ENST00000520276 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
TRPS1-211ENST00000520276 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
TRPS1-211ENST00000520276 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
TRPS1-211ENST00000520276 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
TRPS1-211ENST00000520276 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
TRPS1-211ENST00000520276 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
TRPS1-211ENST00000520276 FTSJ3Q8IY81 847 aaKnown RBP12.22□□□□□ -0.45
TRPS1-211ENST00000520276 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
TRPS1-211ENST00000520276 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
TRPS1-211ENST00000520276 CYP2E1P05181 493 aaPredicted RBP12.21□□□□□ -0.45
TRPS1-211ENST00000520276 TRIM37O94972 964 aa12.21□□□□□ -0.46
TRPS1-211ENST00000520276 TAF7Q15545 349 aaPredicted RBP12.21□□□□□ -0.46
TRPS1-211ENST00000520276 FOXD4L5Q5VV16 416 aaPredicted RBP12.21□□□□□ -0.46
TRPS1-211ENST00000520276 FOXD4L4Q8WXT5 416 aaPredicted RBP12.21□□□□□ -0.46
TRPS1-211ENST00000520276 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
TRPS1-211ENST00000520276 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
TRPS1-211ENST00000520276 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
TRPS1-211ENST00000520276 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
TRPS1-211ENST00000520276 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
TRPS1-211ENST00000520276 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
TRPS1-211ENST00000520276 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
TRPS1-211ENST00000520276 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
TRPS1-211ENST00000520276 DZIP1LQ8IYY4 767 aaKnown RBP12.19□□□□□ -0.46
TRPS1-211ENST00000520276 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
TRPS1-211ENST00000520276 ZDHHC9Q9Y397 364 aa12.19□□□□□ -0.46
TRPS1-211ENST00000520276 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
TRPS1-211ENST00000520276 PHKG2P15735 406 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms