RNA–Protein interactions for RNA: ENST00000520229.1

PDGFRB-206, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-206ENST00000520229 STARD3NLO95772 234 aa20.39■□□□□ 0.85
PDGFRB-206ENST00000520229 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.85
PDGFRB-206ENST00000520229 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
PDGFRB-206ENST00000520229 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
PDGFRB-206ENST00000520229 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
PDGFRB-206ENST00000520229 BRCA1P38398 1863 aaKnown RBP20.37■□□□□ 0.85
PDGFRB-206ENST00000520229 SOS1Q07889 1333 aaPredicted RBP20.37■□□□□ 0.85
PDGFRB-206ENST00000520229 RIPK4P57078 832 aa20.37■□□□□ 0.85
PDGFRB-206ENST00000520229 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
PDGFRB-206ENST00000520229 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
PDGFRB-206ENST00000520229 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
PDGFRB-206ENST00000520229 ANP32CO43423 234 aa20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 GPR162Q16538 588 aa20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
PDGFRB-206ENST00000520229 USP42Q9H9J4 1324 aaKnown RBP20.35■□□□□ 0.85
PDGFRB-206ENST00000520229 MMP10P09238 476 aa20.35■□□□□ 0.85
PDGFRB-206ENST00000520229 GYS1P13807 737 aa20.35■□□□□ 0.85
PDGFRB-206ENST00000520229 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
PDGFRB-206ENST00000520229 SRP68Q9UHB9 627 aaKnown RBP20.35■□□□□ 0.85
PDGFRB-206ENST00000520229 COL15A1P39059 1388 aa20.34■□□□□ 0.85
PDGFRB-206ENST00000520229 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
PDGFRB-206ENST00000520229 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
PDGFRB-206ENST00000520229 ADCY9O60503 1353 aa20.34■□□□□ 0.85
PDGFRB-206ENST00000520229 PXDNLA1KZ92 1463 aa20.33■□□□□ 0.85
PDGFRB-206ENST00000520229 ZPR1O75312 459 aa20.33■□□□□ 0.85
PDGFRB-206ENST00000520229 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
PDGFRB-206ENST00000520229 N4BP2Q86UW6 1770 aaPredicted RBP20.32■□□□□ 0.84
PDGFRB-206ENST00000520229 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
PDGFRB-206ENST00000520229 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
PDGFRB-206ENST00000520229 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
PDGFRB-206ENST00000520229 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
PDGFRB-206ENST00000520229 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 A0A087WZG4 1122 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 A1BGP04217 495 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 FKBP8Q14318 412 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 NARFQ9UHQ1 456 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 PARP3Q9Y6F1 533 aa20.29■□□□□ 0.84
PDGFRB-206ENST00000520229 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
PDGFRB-206ENST00000520229 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
PDGFRB-206ENST00000520229 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
PDGFRB-206ENST00000520229 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
PDGFRB-206ENST00000520229 GRIN3BO60391 1043 aa20.26■□□□□ 0.83
PDGFRB-206ENST00000520229 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
PDGFRB-206ENST00000520229 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
PDGFRB-206ENST00000520229 NRXN2Q9P2S2 1712 aa20.26■□□□□ 0.83
PDGFRB-206ENST00000520229 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
PDGFRB-206ENST00000520229 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
PDGFRB-206ENST00000520229 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
PDGFRB-206ENST00000520229 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
PDGFRB-206ENST00000520229 ATP10DQ9P241 1426 aa20.24■□□□□ 0.83
PDGFRB-206ENST00000520229 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
PDGFRB-206ENST00000520229 ARFGEF1Q9Y6D6 1849 aa20.23■□□□□ 0.83
PDGFRB-206ENST00000520229 APAF1O14727 1248 aa20.23■□□□□ 0.83
PDGFRB-206ENST00000520229 GIGYF1O75420 1035 aaPredicted RBP20.23■□□□□ 0.83
PDGFRB-206ENST00000520229 DDR1Q08345 913 aa20.23■□□□□ 0.83
PDGFRB-206ENST00000520229 TBC1D2BQ9UPU7 963 aa20.23■□□□□ 0.83
PDGFRB-206ENST00000520229 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
PDGFRB-206ENST00000520229 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
PDGFRB-206ENST00000520229 AFDNP55196 1824 aaKnown RBP20.22■□□□□ 0.83
PDGFRB-206ENST00000520229 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
PDGFRB-206ENST00000520229 POLRMTO00411 1230 aaKnown RBP20.21■□□□□ 0.83
PDGFRB-206ENST00000520229 TM4SF1P30408 202 aa20.21■□□□□ 0.83
PDGFRB-206ENST00000520229 NFIXQ14938 502 aa20.21■□□□□ 0.83
PDGFRB-206ENST00000520229 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
PDGFRB-206ENST00000520229 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
PDGFRB-206ENST00000520229 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
PDGFRB-206ENST00000520229 C1QTNF8P60827 252 aa20.19■□□□□ 0.82
PDGFRB-206ENST00000520229 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
PDGFRB-206ENST00000520229 BICDL1Q6ZP65 573 aa20.19■□□□□ 0.82
PDGFRB-206ENST00000520229 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
PDGFRB-206ENST00000520229 KCNA3P22001 575 aa20.18■□□□□ 0.82
PDGFRB-206ENST00000520229 TGFB2P61812 414 aa20.18■□□□□ 0.82
PDGFRB-206ENST00000520229 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
PDGFRB-206ENST00000520229 DLEC1Q9Y238 1755 aa20.18■□□□□ 0.82
PDGFRB-206ENST00000520229 CHL1O00533 1208 aa20.17■□□□□ 0.82
PDGFRB-206ENST00000520229 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
PDGFRB-206ENST00000520229 TBC1D9BQ66K14 1250 aa20.17■□□□□ 0.82
PDGFRB-206ENST00000520229 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
PDGFRB-206ENST00000520229 SERPINB2P05120 415 aa20.16■□□□□ 0.82
PDGFRB-206ENST00000520229 A0A0G2JLW4 131 aa20.15■□□□□ 0.82
PDGFRB-206ENST00000520229 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
PDGFRB-206ENST00000520229 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
PDGFRB-206ENST00000520229 ERBB4Q15303 1308 aa20.15■□□□□ 0.82
PDGFRB-206ENST00000520229 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
PDGFRB-206ENST00000520229 MYL6BP14649 208 aa20.14■□□□□ 0.81
PDGFRB-206ENST00000520229 EIF2S2P20042 333 aaKnown RBP20.14■□□□□ 0.81
PDGFRB-206ENST00000520229 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
PDGFRB-206ENST00000520229 DPEP1P16444 411 aa20.13■□□□□ 0.81
PDGFRB-206ENST00000520229 CLEC4GQ6UXB4 293 aa20.13■□□□□ 0.81
PDGFRB-206ENST00000520229 SETDB2Q96T68 719 aa20.13■□□□□ 0.81
PDGFRB-206ENST00000520229 ANKRD31Q8N7Z5 1873 aa20.12■□□□□ 0.81
PDGFRB-206ENST00000520229 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms