RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PPP1R37O75864 691 aa7.06□□□□□ -1.28
SDCBP-207ENST00000520168 COL13A1Q5TAT6 717 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-207ENST00000520168 COL23A1Q86Y22 540 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-207ENST00000520168 RBM46Q8TBY0 533 aaKnown RBP7.06□□□□□ -1.28
SDCBP-207ENST00000520168 CCNL1Q9UK58 526 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-207ENST00000520168 USP31Q70CQ4 1352 aa7.06□□□□□ -1.28
SDCBP-207ENST00000520168 PLEKHG2Q9H7P9 1386 aa7.06□□□□□ -1.28
SDCBP-207ENST00000520168 IGSF1Q8N6C5 1336 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 KIAA1551Q9HCM1 1747 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 TOGARAM1Q9Y4F4 1720 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 C10orf71Q711Q0 1435 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 FSTL1Q12841 308 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 PTCD2Q8WV60 388 aaKnown RBP7.05□□□□□ -1.28
SDCBP-207ENST00000520168 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-207ENST00000520168 HCSTQ9UBK5 93 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 ITGB4P16144 1822 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 NSD2O96028 1365 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 KTN1Q86UP2 1357 aaKnown RBP7.05□□□□□ -1.28
SDCBP-207ENST00000520168 RGPD2P0DJD1 1756 aa7.05□□□□□ -1.28
SDCBP-207ENST00000520168 N4BP2Q86UW6 1770 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-207ENST00000520168 ADGRD1Q6QNK2 874 aa7.04□□□□□ -1.28
SDCBP-207ENST00000520168 C16orf71Q8IYS4 520 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-207ENST00000520168 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
SDCBP-207ENST00000520168 CGNL1Q0VF96 1302 aa7.03□□□□□ -1.28
SDCBP-207ENST00000520168 PRIM1P49642 420 aaKnown RBP7.03□□□□□ -1.28
SDCBP-207ENST00000520168 FOXK1P85037 733 aa7.03□□□□□ -1.28
SDCBP-207ENST00000520168 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
SDCBP-207ENST00000520168 DDX54Q8TDD1 881 aaKnown RBP7.03□□□□□ -1.28
SDCBP-207ENST00000520168 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
SDCBP-207ENST00000520168 SBF1O95248 1867 aa7.02□□□□□ -1.28
SDCBP-207ENST00000520168 TK2O00142 265 aa7.02□□□□□ -1.29
SDCBP-207ENST00000520168 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 ZNF831Q5JPB2 1677 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 PXDNLA1KZ92 1463 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 TBC1D12O60347 775 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 KCNQ4P56696 695 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 ZCRB1Q8TBF4 217 aaKnown RBP7.01□□□□□ -1.29
SDCBP-207ENST00000520168 AK7Q96M32 723 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 GPHNQ9NQX3 736 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-207ENST00000520168 PLA2G2EQ9NZK7 142 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 WWC3Q9ULE0 1092 aa7.01□□□□□ -1.29
SDCBP-207ENST00000520168 MAP2P11137 1827 aaKnown RBP7.01□□□□□ -1.29
SDCBP-207ENST00000520168 PALLDQ8WX93 1383 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 SSFA2P28290 1259 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 TGFB2P61812 414 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 PLPP6Q8IY26 295 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 IP6K1Q92551 441 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 C4AP0C0L4 1744 aa7□□□□□ -1.29
SDCBP-207ENST00000520168 EDC4Q6P2E9 1401 aaKnown RBP7□□□□□ -1.29
SDCBP-207ENST00000520168 ZC3H4Q9UPT8 1303 aaKnown RBP7□□□□□ -1.29
SDCBP-207ENST00000520168 PPP4R3BQ5MIZ7 849 aa6.99□□□□□ -1.29
SDCBP-207ENST00000520168 SMC1BQ8NDV3 1235 aa6.99□□□□□ -1.29
SDCBP-207ENST00000520168 SMARCC1Q92922 1105 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-207ENST00000520168 NMRK2Q9NPI5 230 aa6.99□□□□□ -1.29
SDCBP-207ENST00000520168 MEGF6O75095 1541 aa6.99□□□□□ -1.29
SDCBP-207ENST00000520168 SMG6Q86US8 1419 aaKnown RBP6.99□□□□□ -1.29
SDCBP-207ENST00000520168 PCDH11XQ9BZA7 1347 aa6.99□□□□□ -1.29
SDCBP-207ENST00000520168 PCDH11YQ9BZA8 1340 aa6.99□□□□□ -1.29
SDCBP-207ENST00000520168 RTL1A6NKG5 1358 aa6.98□□□□□ -1.29
SDCBP-207ENST00000520168 SBNO2Q9Y2G9 1366 aa6.98□□□□□ -1.29
SDCBP-207ENST00000520168 HRO43593 1189 aa6.98□□□□□ -1.29
SDCBP-207ENST00000520168 HDGFL2Q7Z4V5 671 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-207ENST00000520168 HS6ST3Q8IZP7 471 aa6.98□□□□□ -1.29
SDCBP-207ENST00000520168 TIAM2Q8IVF5 1701 aa6.98□□□□□ -1.29
SDCBP-207ENST00000520168 CD163L1Q9NR16 1453 aa6.98□□□□□ -1.29
SDCBP-207ENST00000520168 KCPQ6ZWJ8 1503 aa6.97□□□□□ -1.29
SDCBP-207ENST00000520168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
SDCBP-207ENST00000520168 HSPA1AP0DMV8 641 aaKnown RBP6.97□□□□□ -1.29
SDCBP-207ENST00000520168 HSPA1BP0DMV9 641 aaKnown RBP6.97□□□□□ -1.29
SDCBP-207ENST00000520168 COL5A3P25940 1745 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-207ENST00000520168 PSEN2P49810 448 aa6.97□□□□□ -1.29
SDCBP-207ENST00000520168 CCDC88AQ3V6T2 1871 aa6.97□□□□□ -1.29
SDCBP-207ENST00000520168 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
SDCBP-207ENST00000520168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.97□□□□□ -1.29
SDCBP-207ENST00000520168 BCS1LQ9Y276 419 aa6.97□□□□□ -1.29
SDCBP-207ENST00000520168 DLEC1Q9Y238 1755 aa6.96□□□□□ -1.3
SDCBP-207ENST00000520168 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
SDCBP-207ENST00000520168 DSG2Q14126 1118 aa6.96□□□□□ -1.3
SDCBP-207ENST00000520168 ARHGAP27Q6ZUM4 889 aa6.96□□□□□ -1.3
SDCBP-207ENST00000520168 NME9Q86XW9 330 aa6.96□□□□□ -1.3
SDCBP-207ENST00000520168 RAPGEF4Q8WZA2 1011 aa6.96□□□□□ -1.3
SDCBP-207ENST00000520168 DICER1Q9UPY3 1922 aaKnown RBP6.95□□□□□ -1.3
SDCBP-207ENST00000520168 PHF14O94880 888 aa6.95□□□□□ -1.3
SDCBP-207ENST00000520168 HTRA3P83110 453 aa6.95□□□□□ -1.3
SDCBP-207ENST00000520168 C9orf131Q5VYM1 1079 aa6.95□□□□□ -1.3
SDCBP-207ENST00000520168 CCDC87Q9NVE4 849 aa6.95□□□□□ -1.3
SDCBP-207ENST00000520168 TERF2IPQ9NYB0 399 aa6.95□□□□□ -1.3
SDCBP-207ENST00000520168 ROCK2O75116 1388 aaKnown RBP6.95□□□□□ -1.3
SDCBP-207ENST00000520168 FCHSD2O94868 740 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 MMP10P09238 476 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 TATP17735 454 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-207ENST00000520168 HOXC9P31274 260 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 AMPHP49418 695 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 MPRIPQ6WCQ1 1025 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 NLGN1Q8N2Q7 840 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 LTV1Q96GA3 475 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-207ENST00000520168 VIRMAQ69YN4 1812 aaKnown RBP6.94□□□□□ -1.3
SDCBP-207ENST00000520168 KIF20BQ96Q89 1820 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 A0A1W2PP64 1363 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms