RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, humanhuman

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-208ENST00000520102 NMRK2Q9NPI5 230 aa10.65□□□□□ -0.7
CHMP7-208ENST00000520102 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
CHMP7-208ENST00000520102 COL3A1P02461 1466 aaPredicted RBP10.65□□□□□ -0.7
CHMP7-208ENST00000520102 AFDNP55196 1824 aaKnown RBP10.64□□□□□ -0.71
CHMP7-208ENST00000520102 C9orf131Q5VYM1 1079 aa10.64□□□□□ -0.71
CHMP7-208ENST00000520102 NARFQ9UHQ1 456 aa10.64□□□□□ -0.71
CHMP7-208ENST00000520102 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
CHMP7-208ENST00000520102 TOMM70O94826 608 aa10.63□□□□□ -0.71
CHMP7-208ENST00000520102 CNGB1Q14028 1251 aaPredicted RBP10.63□□□□□ -0.71
CHMP7-208ENST00000520102 NFIXQ14938 502 aa10.63□□□□□ -0.71
CHMP7-208ENST00000520102 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
CHMP7-208ENST00000520102 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
CHMP7-208ENST00000520102 CANXP27824 592 aaKnown RBP10.62□□□□□ -0.71
CHMP7-208ENST00000520102 RNF181Q9P0P0 153 aa10.62□□□□□ -0.71
CHMP7-208ENST00000520102 NPC1L1Q9UHC9 1359 aa10.62□□□□□ -0.71
CHMP7-208ENST00000520102 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
CHMP7-208ENST00000520102 DLEC1Q9Y238 1755 aa10.62□□□□□ -0.71
CHMP7-208ENST00000520102 SBF1O95248 1867 aa10.61□□□□□ -0.71
CHMP7-208ENST00000520102 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
CHMP7-208ENST00000520102 SERPINB2P05120 415 aa10.61□□□□□ -0.71
CHMP7-208ENST00000520102 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
CHMP7-208ENST00000520102 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
CHMP7-208ENST00000520102 IL17REQ8NFR9 667 aa10.61□□□□□ -0.71
CHMP7-208ENST00000520102 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
CHMP7-208ENST00000520102 APLP1P51693 650 aa10.6□□□□□ -0.71
CHMP7-208ENST00000520102 EIF5P55010 431 aaKnown RBP10.6□□□□□ -0.71
CHMP7-208ENST00000520102 RASSF7Q02833 373 aa10.6□□□□□ -0.71
CHMP7-208ENST00000520102 ZNF496Q96IT1 587 aaPredicted RBP10.6□□□□□ -0.71
CHMP7-208ENST00000520102 SCN7AQ01118 1682 aa10.6□□□□□ -0.71
CHMP7-208ENST00000520102 WDR90Q96KV7 1748 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 STARD3NLO95772 234 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 TEFQ10587 303 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 ZNF790Q6PG37 636 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 GAS2L2Q8NHY3 880 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
CHMP7-208ENST00000520102 HEG1Q9ULI3 1381 aa10.59□□□□□ -0.71
CHMP7-208ENST00000520102 TNRC6CQ9HCJ0 1690 aaKnown RBP10.59□□□□□ -0.71
CHMP7-208ENST00000520102 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.71
CHMP7-208ENST00000520102 PRELPP51888 382 aa10.58□□□□□ -0.72
CHMP7-208ENST00000520102 TBC1D9BQ66K14 1250 aa10.58□□□□□ -0.72
CHMP7-208ENST00000520102 C2CD5Q86YS7 1000 aa10.58□□□□□ -0.72
CHMP7-208ENST00000520102 C16orf71Q8IYS4 520 aaPredicted RBP10.58□□□□□ -0.72
CHMP7-208ENST00000520102 DNAJC5GQ8N7S2 189 aa10.58□□□□□ -0.72
CHMP7-208ENST00000520102 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
CHMP7-208ENST00000520102 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
CHMP7-208ENST00000520102 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
CHMP7-208ENST00000520102 A0A087WZG4 1122 aa10.57□□□□□ -0.72
CHMP7-208ENST00000520102 TTLL6Q8N841 843 aa10.57□□□□□ -0.72
CHMP7-208ENST00000520102 PHACTR3Q96KR7 559 aa10.57□□□□□ -0.72
CHMP7-208ENST00000520102 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
CHMP7-208ENST00000520102 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
CHMP7-208ENST00000520102 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
CHMP7-208ENST00000520102 TIAM2Q8IVF5 1701 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 H0YIN7 160 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 KCNQ3O43525 872 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 LMNB1P20700 586 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 PRKAR2BP31323 418 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 IL6STP40189 918 aaPredicted RBP10.56□□□□□ -0.72
CHMP7-208ENST00000520102 HTRA3P83110 453 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 FMNL2Q96PY5 1086 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 TEX13AQ9BXU3 409 aaPredicted RBP10.56□□□□□ -0.72
CHMP7-208ENST00000520102 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
CHMP7-208ENST00000520102 ZC3H4Q9UPT8 1303 aaKnown RBP10.56□□□□□ -0.72
CHMP7-208ENST00000520102 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 NFKBIEO00221 500 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 A1BGP04217 495 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 FSTL1Q12841 308 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
CHMP7-208ENST00000520102 GLTPD2A6NH11 291 aa10.54□□□□□ -0.72
CHMP7-208ENST00000520102 CAMTA2O94983 1202 aa10.54□□□□□ -0.72
CHMP7-208ENST00000520102 ZNF622Q969S3 477 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHMP7-208ENST00000520102 CFAP53Q96M91 514 aa10.54□□□□□ -0.72
CHMP7-208ENST00000520102 BRIP1Q9BX63 1249 aa10.54□□□□□ -0.72
CHMP7-208ENST00000520102 PRAMEF22A3QJZ6 481 aa10.53□□□□□ -0.72
CHMP7-208ENST00000520102 PDE6BP35913 854 aa10.53□□□□□ -0.72
CHMP7-208ENST00000520102 PIP4K2AP48426 406 aaPredicted RBP10.53□□□□□ -0.72
CHMP7-208ENST00000520102 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
CHMP7-208ENST00000520102 USP16Q9Y5T5 823 aa10.53□□□□□ -0.72
CHMP7-208ENST00000520102 C21orf2O43822 256 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 U2AF1L5P0DN76 240 aaPredicted RBP10.52□□□□□ -0.73
CHMP7-208ENST00000520102 PPP2R1AP30153 589 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 U2AF1Q01081 240 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHMP7-208ENST00000520102 MCM10Q7L590 875 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 NPM2Q86SE8 214 aaKnown RBP10.52□□□□□ -0.73
CHMP7-208ENST00000520102 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
CHMP7-208ENST00000520102 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 SMC1BQ8NDV3 1235 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 KLRG1Q96E93 195 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 SETDB2Q96T68 719 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 CACNA1SQ13698 1873 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 FER1L6Q2WGJ9 1857 aa10.52□□□□□ -0.73
CHMP7-208ENST00000520102 VEGFAP15692 232 aaPredicted RBP10.51□□□□□ -0.73
CHMP7-208ENST00000520102 DCTN1Q14203 1278 aa10.51□□□□□ -0.73
CHMP7-208ENST00000520102 RTF1Q92541 710 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms