RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
POLB-208ENST00000520008 HSPA6P17066 643 aa15.97■□□□□ 0.15
POLB-208ENST00000520008 ZBTB1Q9Y2K1 713 aa15.97■□□□□ 0.15
POLB-208ENST00000520008 SCN7AQ01118 1682 aa15.96■□□□□ 0.15
POLB-208ENST00000520008 FCHSD2O94868 740 aa15.96■□□□□ 0.15
POLB-208ENST00000520008 USPL1Q5W0Q7 1092 aa15.96■□□□□ 0.15
POLB-208ENST00000520008 PIM2Q9P1W9 311 aa15.96■□□□□ 0.15
POLB-208ENST00000520008 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
POLB-208ENST00000520008 NARFQ9UHQ1 456 aa15.95■□□□□ 0.14
POLB-208ENST00000520008 SBF1O95248 1867 aa15.95■□□□□ 0.14
POLB-208ENST00000520008 ARHGAP27Q6ZUM4 889 aa15.94■□□□□ 0.14
POLB-208ENST00000520008 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
POLB-208ENST00000520008 ZPR1O75312 459 aa15.93■□□□□ 0.14
POLB-208ENST00000520008 CHRNA5P30532 468 aa15.93■□□□□ 0.14
POLB-208ENST00000520008 NFIXQ14938 502 aa15.93■□□□□ 0.14
POLB-208ENST00000520008 DALRD3Q5D0E6 543 aaKnown RBP15.93■□□□□ 0.14
POLB-208ENST00000520008 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
POLB-208ENST00000520008 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
POLB-208ENST00000520008 TNRC6CQ9HCJ0 1690 aaKnown RBP15.91■□□□□ 0.14
POLB-208ENST00000520008 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
POLB-208ENST00000520008 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 HEG1Q9ULI3 1381 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 GNAT3A8MTJ3 354 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 TOMM70O94826 608 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 C9orf131Q5VYM1 1079 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 ZNF790Q6PG37 636 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
POLB-208ENST00000520008 NMRK2Q9NPI5 230 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 BCORQ6W2J9 1755 aa15.9■□□□□ 0.14
POLB-208ENST00000520008 TTC5Q8N0Z6 440 aa15.89■□□□□ 0.13
POLB-208ENST00000520008 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
POLB-208ENST00000520008 U2SURPO15042 1029 aaKnown RBP15.88■□□□□ 0.13
POLB-208ENST00000520008 SERPINB2P05120 415 aa15.88■□□□□ 0.13
POLB-208ENST00000520008 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
POLB-208ENST00000520008 STARD3NLO95772 234 aa15.87■□□□□ 0.13
POLB-208ENST00000520008 CANXP27824 592 aaKnown RBP15.87■□□□□ 0.13
POLB-208ENST00000520008 TEFQ10587 303 aa15.87■□□□□ 0.13
POLB-208ENST00000520008 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
POLB-208ENST00000520008 TIAM2Q8IVF5 1701 aa15.87■□□□□ 0.13
POLB-208ENST00000520008 WDR90Q96KV7 1748 aa15.87■□□□□ 0.13
POLB-208ENST00000520008 TEX13AQ9BXU3 409 aaPredicted RBP15.86■□□□□ 0.13
POLB-208ENST00000520008 RNF181Q9P0P0 153 aa15.86■□□□□ 0.13
POLB-208ENST00000520008 A0A087WZG4 1122 aa15.85■□□□□ 0.13
POLB-208ENST00000520008 PRKAR2BP31323 418 aa15.85■□□□□ 0.13
POLB-208ENST00000520008 PRELPP51888 382 aa15.85■□□□□ 0.13
POLB-208ENST00000520008 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
POLB-208ENST00000520008 IL6STP40189 918 aaPredicted RBP15.84■□□□□ 0.13
POLB-208ENST00000520008 APLP1P51693 650 aa15.84■□□□□ 0.13
POLB-208ENST00000520008 CNGB1Q14028 1251 aaPredicted RBP15.84■□□□□ 0.13
POLB-208ENST00000520008 RBM46Q8TBY0 533 aaKnown RBP15.84■□□□□ 0.13
POLB-208ENST00000520008 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
POLB-208ENST00000520008 ARFGEF2Q9Y6D5 1785 aa15.83■□□□□ 0.12
POLB-208ENST00000520008 RASSF7Q02833 373 aa15.83■□□□□ 0.12
POLB-208ENST00000520008 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
POLB-208ENST00000520008 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.12
POLB-208ENST00000520008 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 KCNQ3O43525 872 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
POLB-208ENST00000520008 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 DNAJC5GQ8N7S2 189 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 TTLL6Q8N841 843 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
POLB-208ENST00000520008 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
POLB-208ENST00000520008 NFKBIEO00221 500 aa15.81■□□□□ 0.12
POLB-208ENST00000520008 CAMTA2O94983 1202 aa15.81■□□□□ 0.12
POLB-208ENST00000520008 PRR5LQ6MZQ0 368 aa15.81■□□□□ 0.12
POLB-208ENST00000520008 BICDL1Q6ZP65 573 aa15.81■□□□□ 0.12
POLB-208ENST00000520008 TBC1D2BQ9UPU7 963 aa15.81■□□□□ 0.12
POLB-208ENST00000520008 H0YIN7 160 aa15.8■□□□□ 0.12
POLB-208ENST00000520008 A1BGP04217 495 aa15.8■□□□□ 0.12
POLB-208ENST00000520008 LMNB1P20700 586 aa15.8■□□□□ 0.12
POLB-208ENST00000520008 IFFO2Q5TF58 517 aa15.8■□□□□ 0.12
POLB-208ENST00000520008 BRIP1Q9BX63 1249 aa15.8■□□□□ 0.12
POLB-208ENST00000520008 DICER1Q9UPY3 1922 aaKnown RBP15.8■□□□□ 0.12
POLB-208ENST00000520008 LAMB4A4D0S4 1761 aa15.8■□□□□ 0.12
POLB-208ENST00000520008 FSTL1Q12841 308 aa15.79■□□□□ 0.12
POLB-208ENST00000520008 PDZRN3Q9UPQ7 1066 aa15.79■□□□□ 0.12
POLB-208ENST00000520008 KDM3BQ7LBC6 1761 aa15.78■□□□□ 0.12
POLB-208ENST00000520008 PRAMEF22A3QJZ6 481 aa15.78■□□□□ 0.12
POLB-208ENST00000520008 RRAGCQ9HB90 399 aa15.78■□□□□ 0.12
POLB-208ENST00000520008 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
POLB-208ENST00000520008 ZNF330Q9Y3S2 320 aaPredicted RBP15.78■□□□□ 0.12
POLB-208ENST00000520008 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
POLB-208ENST00000520008 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
POLB-208ENST00000520008 DLG5Q8TDM6 1919 aa15.77■□□□□ 0.12
POLB-208ENST00000520008 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
POLB-208ENST00000520008 U2AF1L5P0DN76 240 aaPredicted RBP15.77■□□□□ 0.12
POLB-208ENST00000520008 PDE6BP35913 854 aa15.77■□□□□ 0.12
POLB-208ENST00000520008 U2AF1Q01081 240 aaKnown RBP eCLIP15.77■□□□□ 0.12
POLB-208ENST00000520008 MCM10Q7L590 875 aa15.77■□□□□ 0.12
POLB-208ENST00000520008 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
POLB-208ENST00000520008 HTATSF1O43719 755 aaKnown RBP15.76■□□□□ 0.11
POLB-208ENST00000520008 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
POLB-208ENST00000520008 C16orf71Q8IYS4 520 aaPredicted RBP15.76■□□□□ 0.11
POLB-208ENST00000520008 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
POLB-208ENST00000520008 RGL2O15211 777 aa15.75■□□□□ 0.11
POLB-208ENST00000520008 PIP4K2AP48426 406 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms