RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ADCY9O60503 1353 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 IBTKQ9P2D0 1353 aaPredicted RBP10.4□□□□□ -0.74
HMGB4-203ENST00000519684 PNMA6EA0A0J9YXQ4 647 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 ANXA1P04083 346 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 ZNF790Q6PG37 636 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 C5P01031 1676 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
HMGB4-203ENST00000519684 MRC1P22897 1456 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 NFKBIBQ15653 356 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 TTC5Q8N0Z6 440 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 MAP3K2Q9Y2U5 619 aa10.4□□□□□ -0.74
HMGB4-203ENST00000519684 ALDH1L1O75891 902 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 SDSP20132 328 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 SLKQ9H2G2 1235 aaPredicted RBP10.39□□□□□ -0.75
HMGB4-203ENST00000519684 OSBPL3Q9H4L5 887 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 DDX21Q9NR30 783 aaKnown RBP eCLIP10.39□□□□□ -0.75
HMGB4-203ENST00000519684 RAB11FIP3O75154 756 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 PDE1AP54750 535 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 NFATC2IPQ8NCF5 419 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 SSH3Q8TE77 659 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 WDR17Q8IZU2 1322 aa10.39□□□□□ -0.75
HMGB4-203ENST00000519684 NHSL1Q5SYE7 1610 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 PRAMEF22A3QJZ6 481 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 CABP4P57796 275 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 PROSER3Q2NL68 480 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 TOM1L2Q6ZVM7 507 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 PPP1R42Q7Z4L9 355 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
HMGB4-203ENST00000519684 SRGAP3O43295 1099 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 MX1P20591 662 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 POLA2Q14181 598 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
HMGB4-203ENST00000519684 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
HMGB4-203ENST00000519684 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
HMGB4-203ENST00000519684 CYP27B1O15528 508 aa10.37□□□□□ -0.75
HMGB4-203ENST00000519684 SURF6O75683 361 aaKnown RBP10.37□□□□□ -0.75
HMGB4-203ENST00000519684 NBPF7P0C2Y1 421 aaPredicted RBP10.37□□□□□ -0.75
HMGB4-203ENST00000519684 SNX21Q969T3 373 aa10.37□□□□□ -0.75
HMGB4-203ENST00000519684 FMNL2Q96PY5 1086 aa10.37□□□□□ -0.75
HMGB4-203ENST00000519684 COL5A2P05997 1499 aaPredicted RBP10.37□□□□□ -0.75
HMGB4-203ENST00000519684 SNRPA1P09661 255 aaKnown RBP10.36□□□□□ -0.75
HMGB4-203ENST00000519684 DEKP35659 375 aaKnown RBP10.36□□□□□ -0.75
HMGB4-203ENST00000519684 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
HMGB4-203ENST00000519684 LAMB4A4D0S4 1761 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 REC8O95072 547 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 RIC3Q7Z5B4 369 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 LINS1Q8NG48 757 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 ZCRB1Q8TBF4 217 aaKnown RBP10.36□□□□□ -0.75
HMGB4-203ENST00000519684 AOX1Q06278 1338 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 TUBGCP6Q96RT7 1819 aa10.36□□□□□ -0.75
HMGB4-203ENST00000519684 MYL6BP14649 208 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
HMGB4-203ENST00000519684 LARP1Q6PKG0 1096 aaKnown RBP10.35□□□□□ -0.75
HMGB4-203ENST00000519684 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 KIF1BPQ96EK5 621 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
HMGB4-203ENST00000519684 SALL3Q9BXA9 1300 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 EVA1CP58658 441 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 ANTXR1Q9H6X2 564 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 STAP2Q9UGK3 403 aa10.35□□□□□ -0.75
HMGB4-203ENST00000519684 ERC2O15083 957 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 IL2RBP14784 551 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 PDIA6Q15084 440 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 CARD10Q9BWT7 1032 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 GRM8O00222 908 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 MTX1Q13505 466 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 CWF19L2Q2TBE0 894 aaKnown RBP10.34□□□□□ -0.75
HMGB4-203ENST00000519684 RHPN1Q8TCX5 695 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 IL1RAPL2Q9NP60 686 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
HMGB4-203ENST00000519684 FRAT2O75474 233 aaPredicted RBP10.33□□□□□ -0.76
HMGB4-203ENST00000519684 RABEP1Q15276 862 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 TSHZ3Q63HK5 1081 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 RILPL2Q969X0 211 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 KIF2CQ99661 725 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 CHMP5Q9NZZ3 219 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 ERVV-2B6SEH9 535 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 HSP90AA1P07900 732 aaKnown RBP10.33□□□□□ -0.76
HMGB4-203ENST00000519684 ERC1Q8IUD2 1116 aa10.33□□□□□ -0.76
HMGB4-203ENST00000519684 AK9Q5TCS8 1911 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 UTYO14607 1347 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 AFDNP55196 1824 aaKnown RBP10.32□□□□□ -0.76
HMGB4-203ENST00000519684 COPS6Q7L5N1 327 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 SHANK3Q9BYB0 1731 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 MYD88Q99836 296 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 METTL22Q9BUU2 404 aaPredicted RBP10.32□□□□□ -0.76
HMGB4-203ENST00000519684 USP16Q9Y5T5 823 aa10.32□□□□□ -0.76
HMGB4-203ENST00000519684 PAPPAQ13219 1627 aa10.31□□□□□ -0.76
HMGB4-203ENST00000519684 UBR2Q8IWV8 1755 aa10.31□□□□□ -0.76
HMGB4-203ENST00000519684 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
HMGB4-203ENST00000519684 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
HMGB4-203ENST00000519684 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
HMGB4-203ENST00000519684 MCCP23508 829 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms