RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 USP16Q9Y5T5 823 aa22.24■■□□□ 1.15
CSGALNACT1-207ENST00000519222 SDSP20132 328 aa22.24■■□□□ 1.15
CSGALNACT1-207ENST00000519222 LARP1Q6PKG0 1096 aaKnown RBP22.24■■□□□ 1.15
CSGALNACT1-207ENST00000519222 LRRCC1Q9C099 1032 aa22.24■■□□□ 1.15
CSGALNACT1-207ENST00000519222 CDC45O75419 566 aa22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 TTC5Q8N0Z6 440 aa22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 DDX54Q8TDD1 881 aaKnown RBP22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 SRGAP3O43295 1099 aa22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 EVA1CP58658 441 aa22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
CSGALNACT1-207ENST00000519222 RTL5Q5HYW3 569 aaPredicted RBP22.22■■□□□ 1.15
CSGALNACT1-207ENST00000519222 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
CSGALNACT1-207ENST00000519222 HYPKQ9NX55 129 aa22.22■■□□□ 1.15
CSGALNACT1-207ENST00000519222 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
CSGALNACT1-207ENST00000519222 PXDNLA1KZ92 1463 aa22.21■■□□□ 1.15
CSGALNACT1-207ENST00000519222 PDE1AP54750 535 aa22.21■■□□□ 1.15
CSGALNACT1-207ENST00000519222 C9orf78Q9NZ63 289 aaPredicted RBP22.21■■□□□ 1.15
CSGALNACT1-207ENST00000519222 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.15
CSGALNACT1-207ENST00000519222 SSH3Q8TE77 659 aa22.19■■□□□ 1.14
CSGALNACT1-207ENST00000519222 RBM25P49756 843 aaKnown RBP22.19■■□□□ 1.14
CSGALNACT1-207ENST00000519222 IBTKQ9P2D0 1353 aaPredicted RBP22.19■■□□□ 1.14
CSGALNACT1-207ENST00000519222 COPS6Q7L5N1 327 aa22.18■■□□□ 1.14
CSGALNACT1-207ENST00000519222 RIC3Q7Z5B4 369 aa22.18■■□□□ 1.14
CSGALNACT1-207ENST00000519222 XAGE3Q8WTP9 111 aa22.18■■□□□ 1.14
CSGALNACT1-207ENST00000519222 CRYBG1Q9Y4K1 1723 aa22.18■■□□□ 1.14
CSGALNACT1-207ENST00000519222 HSP90AB1P08238 724 aaKnown RBP22.17■■□□□ 1.14
CSGALNACT1-207ENST00000519222 SNRPA1P09661 255 aaKnown RBP22.17■■□□□ 1.14
CSGALNACT1-207ENST00000519222 NFKBIBQ15653 356 aa22.17■■□□□ 1.14
CSGALNACT1-207ENST00000519222 COL5A2P05997 1499 aaPredicted RBP22.17■■□□□ 1.14
CSGALNACT1-207ENST00000519222 IL2RBP14784 551 aa22.16■■□□□ 1.14
CSGALNACT1-207ENST00000519222 NUTM1Q86Y26 1132 aa22.16■■□□□ 1.14
CSGALNACT1-207ENST00000519222 FMNL2Q96PY5 1086 aa22.16■■□□□ 1.14
CSGALNACT1-207ENST00000519222 DDX58O95786 925 aaKnown RBP22.16■■□□□ 1.14
CSGALNACT1-207ENST00000519222 KIF2CQ99661 725 aa22.16■■□□□ 1.14
CSGALNACT1-207ENST00000519222 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
CSGALNACT1-207ENST00000519222 MX1P20591 662 aa22.15■■□□□ 1.14
CSGALNACT1-207ENST00000519222 POLA2Q14181 598 aa22.15■■□□□ 1.14
CSGALNACT1-207ENST00000519222 CACNA1FO60840 1977 aa22.15■■□□□ 1.14
CSGALNACT1-207ENST00000519222 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.14
CSGALNACT1-207ENST00000519222 BTG4Q9NY30 223 aa22.14■■□□□ 1.14
CSGALNACT1-207ENST00000519222 PCDH11XQ9BZA7 1347 aa22.14■■□□□ 1.13
CSGALNACT1-207ENST00000519222 PCDH11YQ9BZA8 1340 aa22.14■■□□□ 1.13
CSGALNACT1-207ENST00000519222 PTCD1O75127 700 aaKnown RBP22.14■■□□□ 1.13
CSGALNACT1-207ENST00000519222 IGKV5-2P06315 115 aa22.13■■□□□ 1.13
CSGALNACT1-207ENST00000519222 JARID2Q92833 1246 aaPredicted RBP22.13■■□□□ 1.13
CSGALNACT1-207ENST00000519222 OSBPL3Q9H4L5 887 aa22.13■■□□□ 1.13
CSGALNACT1-207ENST00000519222 ADAMTS7Q9UKP4 1686 aa22.13■■□□□ 1.13
CSGALNACT1-207ENST00000519222 SALL3Q9BXA9 1300 aa22.13■■□□□ 1.13
CSGALNACT1-207ENST00000519222 LINS1Q8NG48 757 aa22.13■■□□□ 1.13
CSGALNACT1-207ENST00000519222 ALDH1L1O75891 902 aa22.12■■□□□ 1.13
CSGALNACT1-207ENST00000519222 PA2G4Q9UQ80 394 aaKnown RBP22.12■■□□□ 1.13
CSGALNACT1-207ENST00000519222 SIPA1L3O60292 1781 aaPredicted RBP22.12■■□□□ 1.13
CSGALNACT1-207ENST00000519222 RHPN1Q8TCX5 695 aa22.12■■□□□ 1.13
CSGALNACT1-207ENST00000519222 RILPL2Q969X0 211 aa22.12■■□□□ 1.13
CSGALNACT1-207ENST00000519222 MYD88Q99836 296 aa22.12■■□□□ 1.13
CSGALNACT1-207ENST00000519222 TRIM6-TRIM34B2RNG4 842 aa22.11■■□□□ 1.13
CSGALNACT1-207ENST00000519222 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
CSGALNACT1-207ENST00000519222 GRM8O00222 908 aa22.11■■□□□ 1.13
CSGALNACT1-207ENST00000519222 ANKRD13DQ6ZTN6 518 aa22.11■■□□□ 1.13
CSGALNACT1-207ENST00000519222 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
CSGALNACT1-207ENST00000519222 OS9Q13438 667 aaPredicted RBP22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 LRP10Q7Z4F1 713 aa22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 ABCC6O95255 1503 aa22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 SCN11AQ9UI33 1791 aa22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 CD2BP2O95400 341 aaKnown RBP22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 MAP4K4O95819 1239 aaPredicted RBP22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 UNC5CLQ8IV45 518 aa22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 KAZALD1Q96I82 304 aa22.1■■□□□ 1.13
CSGALNACT1-207ENST00000519222 HSCBQ8IWL3 235 aa22.09■■□□□ 1.13
CSGALNACT1-207ENST00000519222 BICC1Q9H694 974 aaKnown RBP22.09■■□□□ 1.13
CSGALNACT1-207ENST00000519222 ANTXR1Q9H6X2 564 aa22.09■■□□□ 1.13
CSGALNACT1-207ENST00000519222 CASC1Q6TDU7 716 aa22.09■■□□□ 1.13
CSGALNACT1-207ENST00000519222 ATP5J2-PTCD1G3V325 749 aa22.08■■□□□ 1.13
CSGALNACT1-207ENST00000519222 NEXNQ0ZGT2 675 aa22.08■■□□□ 1.13
CSGALNACT1-207ENST00000519222 USP26Q9BXU7 913 aa22.08■■□□□ 1.13
CSGALNACT1-207ENST00000519222 NEURL1BA8MQ27 555 aa22.07■■□□□ 1.12
CSGALNACT1-207ENST00000519222 RAB11FIP3O75154 756 aa22.07■■□□□ 1.12
CSGALNACT1-207ENST00000519222 KIF1BPQ96EK5 621 aa22.07■■□□□ 1.12
CSGALNACT1-207ENST00000519222 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
CSGALNACT1-207ENST00000519222 A1BGP04217 495 aa22.06■■□□□ 1.12
CSGALNACT1-207ENST00000519222 METTL22Q9BUU2 404 aaPredicted RBP22.06■■□□□ 1.12
CSGALNACT1-207ENST00000519222 C5P01031 1676 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 NBPF26B4DH59 902 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 NBPF14Q5TI25 921 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 NBPF10Q6P3W6 841 aaKnown RBP22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 NBPF15Q8N660 670 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 KLHDC4Q8TBB5 520 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 GCKRQ14397 625 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 STAP2Q9UGK3 403 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 MRC1P22897 1456 aa22.05■■□□□ 1.12
CSGALNACT1-207ENST00000519222 MTX1Q13505 466 aa22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 DEKP35659 375 aaKnown RBP22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 NKX1-1Q15270 411 aaPredicted RBP22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 EPHA10Q5JZY3 1008 aa22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 SIL1Q9H173 461 aa22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 FOXD4L1Q9NU39 408 aa22.04■■□□□ 1.12
CSGALNACT1-207ENST00000519222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.03■■□□□ 1.12
CSGALNACT1-207ENST00000519222 ERC2O15083 957 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms