RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 AKAP4Q5JQC9 854 aa11.93□□□□□ -0.5
TRIM35-202ENST00000519219 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
TRIM35-202ENST00000519219 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
TRIM35-202ENST00000519219 KNSTRNQ9Y448 316 aa11.93□□□□□ -0.5
TRIM35-202ENST00000519219 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
TRIM35-202ENST00000519219 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
TRIM35-202ENST00000519219 TIAM2Q8IVF5 1701 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 TOMM70O94826 608 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 PRELPP51888 382 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 RASSF7Q02833 373 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 NFIXQ14938 502 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
TRIM35-202ENST00000519219 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
TRIM35-202ENST00000519219 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 COL15A1P39059 1388 aa11.92□□□□□ -0.5
TRIM35-202ENST00000519219 COL11A2P13942 1736 aaPredicted RBP11.91□□□□□ -0.5
TRIM35-202ENST00000519219 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
TRIM35-202ENST00000519219 APLP1P51693 650 aa11.91□□□□□ -0.5
TRIM35-202ENST00000519219 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
TRIM35-202ENST00000519219 SCN7AQ01118 1682 aa11.9□□□□□ -0.5
TRIM35-202ENST00000519219 ZPR1O75312 459 aa11.89□□□□□ -0.51
TRIM35-202ENST00000519219 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
TRIM35-202ENST00000519219 CC2D1BQ5T0F9 858 aaKnown RBP11.89□□□□□ -0.51
TRIM35-202ENST00000519219 RRAGCQ9HB90 399 aa11.89□□□□□ -0.51
TRIM35-202ENST00000519219 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
TRIM35-202ENST00000519219 PER1O15534 1290 aaPredicted RBP11.88□□□□□ -0.51
TRIM35-202ENST00000519219 SERPINB2P05120 415 aa11.88□□□□□ -0.51
TRIM35-202ENST00000519219 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
TRIM35-202ENST00000519219 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
TRIM35-202ENST00000519219 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
TRIM35-202ENST00000519219 BICDL1Q6ZP65 573 aa11.87□□□□□ -0.51
TRIM35-202ENST00000519219 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
TRIM35-202ENST00000519219 DICER1Q9UPY3 1922 aaKnown RBP11.87□□□□□ -0.51
TRIM35-202ENST00000519219 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
TRIM35-202ENST00000519219 DIAPH1O60610 1272 aaKnown RBP11.86□□□□□ -0.51
TRIM35-202ENST00000519219 BCORQ6W2J9 1755 aa11.86□□□□□ -0.51
TRIM35-202ENST00000519219 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
TRIM35-202ENST00000519219 NFKBIEO00221 500 aa11.85□□□□□ -0.51
TRIM35-202ENST00000519219 EIF5P55010 431 aaKnown RBP11.85□□□□□ -0.51
TRIM35-202ENST00000519219 TBC1D9BQ66K14 1250 aa11.85□□□□□ -0.51
TRIM35-202ENST00000519219 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
TRIM35-202ENST00000519219 C16orf71Q8IYS4 520 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-202ENST00000519219 IL17REQ8NFR9 667 aa11.85□□□□□ -0.51
TRIM35-202ENST00000519219 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-202ENST00000519219 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
TRIM35-202ENST00000519219 KCNQ3O43525 872 aa11.84□□□□□ -0.51
TRIM35-202ENST00000519219 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
TRIM35-202ENST00000519219 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
TRIM35-202ENST00000519219 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
TRIM35-202ENST00000519219 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-202ENST00000519219 FSTL1Q12841 308 aa11.83□□□□□ -0.52
TRIM35-202ENST00000519219 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
TRIM35-202ENST00000519219 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
TRIM35-202ENST00000519219 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-202ENST00000519219 TBC1D2BQ9UPU7 963 aa11.83□□□□□ -0.52
TRIM35-202ENST00000519219 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-202ENST00000519219 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
TRIM35-202ENST00000519219 A1BGP04217 495 aa11.82□□□□□ -0.52
TRIM35-202ENST00000519219 LMNB1P20700 586 aa11.82□□□□□ -0.52
TRIM35-202ENST00000519219 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
TRIM35-202ENST00000519219 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 GLTPD2A6NH11 291 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 POTECB2RU33 542 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 COL13A1Q5TAT6 717 aaPredicted RBP11.81□□□□□ -0.52
TRIM35-202ENST00000519219 PRR5LQ6MZQ0 368 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
TRIM35-202ENST00000519219 GNAT3A8MTJ3 354 aa11.8□□□□□ -0.52
TRIM35-202ENST00000519219 H0YIN7 160 aa11.8□□□□□ -0.52
TRIM35-202ENST00000519219 C21orf2O43822 256 aa11.8□□□□□ -0.52
TRIM35-202ENST00000519219 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
TRIM35-202ENST00000519219 STARD3NLO95772 234 aa11.8□□□□□ -0.52
TRIM35-202ENST00000519219 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
TRIM35-202ENST00000519219 ZNF622Q969S3 477 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRIM35-202ENST00000519219 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
TRIM35-202ENST00000519219 PCNTO95613 3336 aa11.79□□□□□ -0.52
TRIM35-202ENST00000519219 TEFQ10587 303 aa11.79□□□□□ -0.52
TRIM35-202ENST00000519219 ZC3H4Q9UPT8 1303 aaKnown RBP11.79□□□□□ -0.52
TRIM35-202ENST00000519219 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
TRIM35-202ENST00000519219 A0A087WZG4 1122 aa11.78□□□□□ -0.52
TRIM35-202ENST00000519219 PRKAR2BP31323 418 aa11.78□□□□□ -0.52
TRIM35-202ENST00000519219 GAS2L2Q8NHY3 880 aa11.78□□□□□ -0.52
TRIM35-202ENST00000519219 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
TRIM35-202ENST00000519219 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
TRIM35-202ENST00000519219 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
TRIM35-202ENST00000519219 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
TRIM35-202ENST00000519219 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-202ENST00000519219 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-202ENST00000519219 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
TRIM35-202ENST00000519219 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
TRIM35-202ENST00000519219 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
TRIM35-202ENST00000519219 MCM10Q7L590 875 aa11.76□□□□□ -0.53
TRIM35-202ENST00000519219 DZIP3Q86Y13 1208 aaKnown RBP11.76□□□□□ -0.53
TRIM35-202ENST00000519219 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
TRIM35-202ENST00000519219 SLC34A2O95436 690 aa11.75□□□□□ -0.53
TRIM35-202ENST00000519219 PDE6BP35913 854 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms