RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
MRPS28-204ENST00000519120 TM4SF1P30408 202 aa21.09■□□□□ 0.97
MRPS28-204ENST00000519120 ZNF496Q96IT1 587 aaPredicted RBP21.09■□□□□ 0.97
MRPS28-204ENST00000519120 DDR1Q08345 913 aa21.08■□□□□ 0.97
MRPS28-204ENST00000519120 ATP10DQ9P241 1426 aa21.07■□□□□ 0.96
MRPS28-204ENST00000519120 A0A0G2JLW4 131 aa21.07■□□□□ 0.96
MRPS28-204ENST00000519120 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
MRPS28-204ENST00000519120 N4BP2Q86UW6 1770 aaPredicted RBP21.07■□□□□ 0.96
MRPS28-204ENST00000519120 POLRMTO00411 1230 aaKnown RBP21.06■□□□□ 0.96
MRPS28-204ENST00000519120 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
MRPS28-204ENST00000519120 GIGYF1O75420 1035 aaPredicted RBP21.06■□□□□ 0.96
MRPS28-204ENST00000519120 C1QTNF8P60827 252 aa21.06■□□□□ 0.96
MRPS28-204ENST00000519120 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
MRPS28-204ENST00000519120 BRCA1P38398 1863 aaKnown RBP21.05■□□□□ 0.96
MRPS28-204ENST00000519120 DPEP1P16444 411 aa21.05■□□□□ 0.96
MRPS28-204ENST00000519120 EIF5P55010 431 aaKnown RBP21.05■□□□□ 0.96
MRPS28-204ENST00000519120 WWC3Q9ULE0 1092 aa21.05■□□□□ 0.96
MRPS28-204ENST00000519120 A0A087WZG4 1122 aa21.04■□□□□ 0.96
MRPS28-204ENST00000519120 KCNA3P22001 575 aa21.04■□□□□ 0.96
MRPS28-204ENST00000519120 RTF1Q92541 710 aaKnown RBP21.04■□□□□ 0.96
MRPS28-204ENST00000519120 BCS1LQ9Y276 419 aa21.04■□□□□ 0.96
MRPS28-204ENST00000519120 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
MRPS28-204ENST00000519120 CANXP27824 592 aaKnown RBP21.03■□□□□ 0.96
MRPS28-204ENST00000519120 BCL2L12Q9HB09 334 aa21.03■□□□□ 0.96
MRPS28-204ENST00000519120 NRXN2Q9P2S2 1712 aa21.03■□□□□ 0.96
MRPS28-204ENST00000519120 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
MRPS28-204ENST00000519120 NFIXQ14938 502 aa21.02■□□□□ 0.96
MRPS28-204ENST00000519120 PIM2Q9P1W9 311 aa21.02■□□□□ 0.96
MRPS28-204ENST00000519120 ARFGEF1Q9Y6D6 1849 aa20.99■□□□□ 0.95
MRPS28-204ENST00000519120 NEFMP07197 916 aa20.99■□□□□ 0.95
MRPS28-204ENST00000519120 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
MRPS28-204ENST00000519120 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
MRPS28-204ENST00000519120 MCM10Q7L590 875 aa20.98■□□□□ 0.95
MRPS28-204ENST00000519120 KCNQ3O43525 872 aa20.97■□□□□ 0.95
MRPS28-204ENST00000519120 SERPINB2P05120 415 aa20.97■□□□□ 0.95
MRPS28-204ENST00000519120 DALRD3Q5D0E6 543 aaKnown RBP20.97■□□□□ 0.95
MRPS28-204ENST00000519120 AFDNP55196 1824 aaKnown RBP20.97■□□□□ 0.95
MRPS28-204ENST00000519120 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
MRPS28-204ENST00000519120 PNNQ9H307 717 aaKnown RBP20.96■□□□□ 0.95
MRPS28-204ENST00000519120 A1BGP04217 495 aa20.95■□□□□ 0.94
MRPS28-204ENST00000519120 SNRPA1P09661 255 aaKnown RBP20.95■□□□□ 0.94
MRPS28-204ENST00000519120 RALBP1Q15311 655 aa20.95■□□□□ 0.94
MRPS28-204ENST00000519120 NPM2Q86SE8 214 aaKnown RBP20.95■□□□□ 0.94
MRPS28-204ENST00000519120 PLEKHF1Q96S99 279 aa20.95■□□□□ 0.94
MRPS28-204ENST00000519120 CHRNA5P30532 468 aa20.94■□□□□ 0.94
MRPS28-204ENST00000519120 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
MRPS28-204ENST00000519120 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
MRPS28-204ENST00000519120 PDZRN3Q9UPQ7 1066 aa20.93■□□□□ 0.94
MRPS28-204ENST00000519120 USP16Q9Y5T5 823 aa20.93■□□□□ 0.94
MRPS28-204ENST00000519120 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
MRPS28-204ENST00000519120 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
MRPS28-204ENST00000519120 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
MRPS28-204ENST00000519120 RGL2O15211 777 aa20.92■□□□□ 0.94
MRPS28-204ENST00000519120 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
MRPS28-204ENST00000519120 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
MRPS28-204ENST00000519120 TBC1D2BQ9UPU7 963 aa20.92■□□□□ 0.94
MRPS28-204ENST00000519120 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
MRPS28-204ENST00000519120 TBC1D9BQ66K14 1250 aa20.91■□□□□ 0.94
MRPS28-204ENST00000519120 BCORQ6W2J9 1755 aa20.91■□□□□ 0.94
MRPS28-204ENST00000519120 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
MRPS28-204ENST00000519120 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
MRPS28-204ENST00000519120 ZNF526Q8TF50 670 aaPredicted RBP20.9■□□□□ 0.94
MRPS28-204ENST00000519120 MAPK8IP3Q9UPT6 1336 aa20.89■□□□□ 0.93
MRPS28-204ENST00000519120 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
MRPS28-204ENST00000519120 BICDL1Q6ZP65 573 aa20.89■□□□□ 0.93
MRPS28-204ENST00000519120 BRIP1Q9BX63 1249 aa20.89■□□□□ 0.93
MRPS28-204ENST00000519120 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
MRPS28-204ENST00000519120 PRAMEF22A3QJZ6 481 aa20.88■□□□□ 0.93
MRPS28-204ENST00000519120 H0YIN7 160 aa20.88■□□□□ 0.93
MRPS28-204ENST00000519120 SETDB2Q96T68 719 aa20.88■□□□□ 0.93
MRPS28-204ENST00000519120 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
MRPS28-204ENST00000519120 C9orf131Q5VYM1 1079 aa20.87■□□□□ 0.93
MRPS28-204ENST00000519120 PRR5LQ6MZQ0 368 aa20.87■□□□□ 0.93
MRPS28-204ENST00000519120 C2CD5Q86YS7 1000 aa20.87■□□□□ 0.93
MRPS28-204ENST00000519120 TTLL6Q8N841 843 aa20.87■□□□□ 0.93
MRPS28-204ENST00000519120 LAMB4A4D0S4 1761 aa20.87■□□□□ 0.93
MRPS28-204ENST00000519120 KIF3CO14782 793 aa20.86■□□□□ 0.93
MRPS28-204ENST00000519120 PDE6BP35913 854 aa20.86■□□□□ 0.93
MRPS28-204ENST00000519120 ZNF652Q9Y2D9 606 aa20.86■□□□□ 0.93
MRPS28-204ENST00000519120 ZC3H4Q9UPT8 1303 aaKnown RBP20.85■□□□□ 0.93
MRPS28-204ENST00000519120 MYBBP1AQ9BQG0 1328 aaKnown RBP20.84■□□□□ 0.93
MRPS28-204ENST00000519120 ANKRD31Q8N7Z5 1873 aa20.84■□□□□ 0.93
MRPS28-204ENST00000519120 NBPF26B4DH59 902 aa20.84■□□□□ 0.93
MRPS28-204ENST00000519120 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
MRPS28-204ENST00000519120 NBPF10Q6P3W6 841 aaKnown RBP20.84■□□□□ 0.93
MRPS28-204ENST00000519120 NBPF15Q8N660 670 aa20.84■□□□□ 0.93
MRPS28-204ENST00000519120 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
MRPS28-204ENST00000519120 PIP4K2AP48426 406 aaPredicted RBP20.82■□□□□ 0.92
MRPS28-204ENST00000519120 EIF4A1P60842 406 aaKnown RBP20.82■□□□□ 0.92
MRPS28-204ENST00000519120 ST5P78524 1137 aa20.82■□□□□ 0.92
MRPS28-204ENST00000519120 MIS18AQ9NYP9 233 aa20.82■□□□□ 0.92
MRPS28-204ENST00000519120 RNF181Q9P0P0 153 aa20.82■□□□□ 0.92
MRPS28-204ENST00000519120 SBF1O95248 1867 aa20.8■□□□□ 0.92
MRPS28-204ENST00000519120 THUMPD2Q9BTF0 503 aaKnown RBP20.8■□□□□ 0.92
MRPS28-204ENST00000519120 BABAM1Q9NWV8 329 aa20.8■□□□□ 0.92
MRPS28-204ENST00000519120 COL11A2P13942 1736 aaPredicted RBP20.8■□□□□ 0.92
MRPS28-204ENST00000519120 KDM2BQ8NHM5 1336 aa20.79■□□□□ 0.92
MRPS28-204ENST00000519120 NPHP1O15259 732 aa20.79■□□□□ 0.92
MRPS28-204ENST00000519120 TOMM70O94826 608 aa20.79■□□□□ 0.92
MRPS28-204ENST00000519120 HSPA6P17066 643 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms