RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 NFIXQ14938 502 aa16.92■□□□□ 0.3
TRAPPC9-204ENST00000518723 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
TRAPPC9-204ENST00000518723 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
TRAPPC9-204ENST00000518723 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
TRAPPC9-204ENST00000518723 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
TRAPPC9-204ENST00000518723 POLR3GLQ9BT43 218 aa16.91■□□□□ 0.3
TRAPPC9-204ENST00000518723 PANK3Q9H999 370 aa16.91■□□□□ 0.3
TRAPPC9-204ENST00000518723 COL15A1P39059 1388 aa16.9■□□□□ 0.3
TRAPPC9-204ENST00000518723 IL13P35225 146 aa16.9■□□□□ 0.3
TRAPPC9-204ENST00000518723 TTLL6Q8N841 843 aa16.9■□□□□ 0.3
TRAPPC9-204ENST00000518723 MRC1P22897 1456 aa16.9■□□□□ 0.3
TRAPPC9-204ENST00000518723 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.3
TRAPPC9-204ENST00000518723 CAPN15O75808 1086 aa16.89■□□□□ 0.29
TRAPPC9-204ENST00000518723 SERPINB2P05120 415 aa16.89■□□□□ 0.29
TRAPPC9-204ENST00000518723 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
TRAPPC9-204ENST00000518723 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
TRAPPC9-204ENST00000518723 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
TRAPPC9-204ENST00000518723 NFKBIEO00221 500 aa16.88■□□□□ 0.29
TRAPPC9-204ENST00000518723 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-204ENST00000518723 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-204ENST00000518723 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
TRAPPC9-204ENST00000518723 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
TRAPPC9-204ENST00000518723 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-204ENST00000518723 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
TRAPPC9-204ENST00000518723 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
TRAPPC9-204ENST00000518723 POTECB2RU33 542 aa16.86■□□□□ 0.29
TRAPPC9-204ENST00000518723 H0YIN7 160 aa16.86■□□□□ 0.29
TRAPPC9-204ENST00000518723 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-204ENST00000518723 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
TRAPPC9-204ENST00000518723 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
TRAPPC9-204ENST00000518723 CARMIL3Q8ND23 1372 aa16.85■□□□□ 0.29
TRAPPC9-204ENST00000518723 TIAM2Q8IVF5 1701 aa16.84■□□□□ 0.29
TRAPPC9-204ENST00000518723 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
TRAPPC9-204ENST00000518723 EIF5P55010 431 aaKnown RBP16.82■□□□□ 0.28
TRAPPC9-204ENST00000518723 EIF4G2P78344 907 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAPPC9-204ENST00000518723 LTBP3Q9NS15 1303 aa16.81■□□□□ 0.28
TRAPPC9-204ENST00000518723 A0A087WZG4 1122 aa16.81■□□□□ 0.28
TRAPPC9-204ENST00000518723 BRIP1Q9BX63 1249 aa16.81■□□□□ 0.28
TRAPPC9-204ENST00000518723 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
TRAPPC9-204ENST00000518723 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 STARD3NLO95772 234 aa16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 PDE6BP35913 854 aa16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 ERFEQ4G0M1 354 aa16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
TRAPPC9-204ENST00000518723 C21orf2O43822 256 aa16.79■□□□□ 0.28
TRAPPC9-204ENST00000518723 MTHFSDQ2M296 383 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-204ENST00000518723 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
TRAPPC9-204ENST00000518723 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
TRAPPC9-204ENST00000518723 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRAPPC9-204ENST00000518723 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
TRAPPC9-204ENST00000518723 AMER1Q5JTC6 1135 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-204ENST00000518723 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
TRAPPC9-204ENST00000518723 HMOX1P09601 288 aa16.77■□□□□ 0.28
TRAPPC9-204ENST00000518723 PRR5LQ6MZQ0 368 aa16.77■□□□□ 0.28
TRAPPC9-204ENST00000518723 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.28
TRAPPC9-204ENST00000518723 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
TRAPPC9-204ENST00000518723 ANKRD31Q8N7Z5 1873 aa16.76■□□□□ 0.27
TRAPPC9-204ENST00000518723 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-204ENST00000518723 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-204ENST00000518723 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
TRAPPC9-204ENST00000518723 FER1L6Q2WGJ9 1857 aa16.76■□□□□ 0.27
TRAPPC9-204ENST00000518723 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
TRAPPC9-204ENST00000518723 IL6STP40189 918 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-204ENST00000518723 MKRN1Q9UHC7 482 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-204ENST00000518723 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-204ENST00000518723 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
TRAPPC9-204ENST00000518723 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 DDNO94850 711 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 POTEIP0CG38 1075 aa16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 STYK1Q6J9G0 422 aa16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 CNKSR1Q969H4 720 aa16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 CNTNAP1P78357 1384 aa16.74■□□□□ 0.27
TRAPPC9-204ENST00000518723 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-204ENST00000518723 ZNF790Q6PG37 636 aa16.73■□□□□ 0.27
TRAPPC9-204ENST00000518723 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
TRAPPC9-204ENST00000518723 L3MBTL3Q96JM7 780 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-204ENST00000518723 TBC1D2BQ9UPU7 963 aa16.73■□□□□ 0.27
TRAPPC9-204ENST00000518723 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-204ENST00000518723 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 SRGNP10124 158 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 CCDC24Q8N4L8 307 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
TRAPPC9-204ENST00000518723 FOXN1O15353 648 aa16.71■□□□□ 0.27
TRAPPC9-204ENST00000518723 CAMTA2O94983 1202 aa16.71■□□□□ 0.27
TRAPPC9-204ENST00000518723 TEFQ10587 303 aa16.71■□□□□ 0.27
TRAPPC9-204ENST00000518723 MASTLQ96GX5 879 aa16.71■□□□□ 0.27
TRAPPC9-204ENST00000518723 ST5P78524 1137 aa16.7■□□□□ 0.26
TRAPPC9-204ENST00000518723 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
TRAPPC9-204ENST00000518723 C7orf43Q8WVR3 580 aa16.7■□□□□ 0.26
TRAPPC9-204ENST00000518723 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms