RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 PER1O15534 1290 aaPredicted RBP24.33■■□□□ 1.49
TFF3-204ENST00000518498 NARFQ9UHQ1 456 aa24.33■■□□□ 1.49
TFF3-204ENST00000518498 ANP32CO43423 234 aa24.32■■□□□ 1.48
TFF3-204ENST00000518498 CC2D1BQ5T0F9 858 aaKnown RBP24.31■■□□□ 1.48
TFF3-204ENST00000518498 VSIG10Q8N0Z9 540 aa24.31■■□□□ 1.48
TFF3-204ENST00000518498 NPC1L1Q9UHC9 1359 aa24.3■■□□□ 1.48
TFF3-204ENST00000518498 C16orf71Q8IYS4 520 aaPredicted RBP24.3■■□□□ 1.48
TFF3-204ENST00000518498 ARFGEF1Q9Y6D6 1849 aa24.3■■□□□ 1.48
TFF3-204ENST00000518498 NFIXQ14938 502 aa24.29■■□□□ 1.48
TFF3-204ENST00000518498 RNF181Q9P0P0 153 aa24.29■■□□□ 1.48
TFF3-204ENST00000518498 ADAMTS7Q9UKP4 1686 aa24.28■■□□□ 1.48
TFF3-204ENST00000518498 ZBTB1Q9Y2K1 713 aa24.28■■□□□ 1.48
TFF3-204ENST00000518498 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
TFF3-204ENST00000518498 MRC1P22897 1456 aa24.27■■□□□ 1.48
TFF3-204ENST00000518498 RBM46Q8TBY0 533 aaKnown RBP24.27■■□□□ 1.48
TFF3-204ENST00000518498 COL15A1P39059 1388 aa24.27■■□□□ 1.48
TFF3-204ENST00000518498 SERPINB2P05120 415 aa24.26■■□□□ 1.47
TFF3-204ENST00000518498 CANXP27824 592 aaKnown RBP24.26■■□□□ 1.47
TFF3-204ENST00000518498 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
TFF3-204ENST00000518498 STARD3NLO95772 234 aa24.25■■□□□ 1.47
TFF3-204ENST00000518498 TTC5Q8N0Z6 440 aa24.25■■□□□ 1.47
TFF3-204ENST00000518498 DNAJC5GQ8N7S2 189 aa24.25■■□□□ 1.47
TFF3-204ENST00000518498 BCL2L12Q9HB09 334 aa24.25■■□□□ 1.47
TFF3-204ENST00000518498 RRAGCQ9HB90 399 aa24.24■■□□□ 1.47
TFF3-204ENST00000518498 U2SURPO15042 1029 aaKnown RBP24.23■■□□□ 1.47
TFF3-204ENST00000518498 A0A087WZG4 1122 aa24.22■■□□□ 1.47
TFF3-204ENST00000518498 CNGB1Q14028 1251 aaPredicted RBP24.22■■□□□ 1.47
TFF3-204ENST00000518498 RALBP1Q15311 655 aa24.22■■□□□ 1.47
TFF3-204ENST00000518498 EIF5P55010 431 aaKnown RBP24.21■■□□□ 1.47
TFF3-204ENST00000518498 TEFQ10587 303 aa24.21■■□□□ 1.47
TFF3-204ENST00000518498 FSTL1Q12841 308 aa24.21■■□□□ 1.47
TFF3-204ENST00000518498 TTLL6Q8N841 843 aa24.21■■□□□ 1.47
TFF3-204ENST00000518498 IL17REQ8NFR9 667 aa24.21■■□□□ 1.47
TFF3-204ENST00000518498 TEX13AQ9BXU3 409 aaPredicted RBP24.21■■□□□ 1.47
TFF3-204ENST00000518498 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
TFF3-204ENST00000518498 GNAT3A8MTJ3 354 aa24.2■■□□□ 1.46
TFF3-204ENST00000518498 H0YIN7 160 aa24.2■■□□□ 1.46
TFF3-204ENST00000518498 BICDL1Q6ZP65 573 aa24.2■■□□□ 1.46
TFF3-204ENST00000518498 C2CD5Q86YS7 1000 aa24.2■■□□□ 1.46
TFF3-204ENST00000518498 GAS2L2Q8NHY3 880 aa24.2■■□□□ 1.46
TFF3-204ENST00000518498 PRKRIP1Q9H875 184 aaPredicted RBP24.2■■□□□ 1.46
TFF3-204ENST00000518498 ZNF790Q6PG37 636 aa24.19■■□□□ 1.46
TFF3-204ENST00000518498 ZNF496Q96IT1 587 aaPredicted RBP24.19■■□□□ 1.46
TFF3-204ENST00000518498 RASSF7Q02833 373 aa24.18■■□□□ 1.46
TFF3-204ENST00000518498 AFDNP55196 1824 aaKnown RBP24.18■■□□□ 1.46
TFF3-204ENST00000518498 LMNB1P20700 586 aa24.17■■□□□ 1.46
TFF3-204ENST00000518498 NRXN2Q9P2S2 1712 aa24.17■■□□□ 1.46
TFF3-204ENST00000518498 SBF1O95248 1867 aa24.17■■□□□ 1.46
TFF3-204ENST00000518498 ZC3H4Q9UPT8 1303 aaKnown RBP24.16■■□□□ 1.46
TFF3-204ENST00000518498 HEG1Q9ULI3 1381 aa24.16■■□□□ 1.46
TFF3-204ENST00000518498 TBC1D9BQ66K14 1250 aa24.15■■□□□ 1.46
TFF3-204ENST00000518498 UBR2Q8IWV8 1755 aa24.15■■□□□ 1.46
TFF3-204ENST00000518498 MIER1Q8N108 512 aa24.14■■□□□ 1.45
TFF3-204ENST00000518498 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.45
TFF3-204ENST00000518498 TBC1D2BQ9UPU7 963 aa24.14■■□□□ 1.45
TFF3-204ENST00000518498 ZNF330Q9Y3S2 320 aaPredicted RBP24.14■■□□□ 1.45
TFF3-204ENST00000518498 IL6STP40189 918 aaPredicted RBP24.13■■□□□ 1.45
TFF3-204ENST00000518498 NPM2Q86SE8 214 aaKnown RBP24.13■■□□□ 1.45
TFF3-204ENST00000518498 FMNL2Q96PY5 1086 aa24.13■■□□□ 1.45
TFF3-204ENST00000518498 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
TFF3-204ENST00000518498 GLTPD2A6NH11 291 aa24.12■■□□□ 1.45
TFF3-204ENST00000518498 PDE6BP35913 854 aa24.12■■□□□ 1.45
TFF3-204ENST00000518498 PRELPP51888 382 aa24.12■■□□□ 1.45
TFF3-204ENST00000518498 HTRA3P83110 453 aa24.12■■□□□ 1.45
TFF3-204ENST00000518498 SMC1BQ8NDV3 1235 aa24.12■■□□□ 1.45
TFF3-204ENST00000518498 ZNF622Q969S3 477 aaKnown RBP eCLIP24.12■■□□□ 1.45
TFF3-204ENST00000518498 BRIP1Q9BX63 1249 aa24.12■■□□□ 1.45
TFF3-204ENST00000518498 A1BGP04217 495 aa24.11■■□□□ 1.45
TFF3-204ENST00000518498 VEGFAP15692 232 aaPredicted RBP24.11■■□□□ 1.45
TFF3-204ENST00000518498 KLRG1Q96E93 195 aa24.11■■□□□ 1.45
TFF3-204ENST00000518498 CARMIL3Q8ND23 1372 aa24.11■■□□□ 1.45
TFF3-204ENST00000518498 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
TFF3-204ENST00000518498 PHACTR3Q96KR7 559 aa24.1■■□□□ 1.45
TFF3-204ENST00000518498 CFAP53Q96M91 514 aa24.1■■□□□ 1.45
TFF3-204ENST00000518498 WDR90Q96KV7 1748 aa24.1■■□□□ 1.45
TFF3-204ENST00000518498 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
TFF3-204ENST00000518498 DLEC1Q9Y238 1755 aa24.09■■□□□ 1.45
TFF3-204ENST00000518498 TNRC6CQ9HCJ0 1690 aaKnown RBP24.09■■□□□ 1.45
TFF3-204ENST00000518498 CCER2I3L3R5 266 aa24.09■■□□□ 1.45
TFF3-204ENST00000518498 SETDB2Q96T68 719 aa24.09■■□□□ 1.45
TFF3-204ENST00000518498 NFKBIEO00221 500 aa24.08■■□□□ 1.45
TFF3-204ENST00000518498 PRKAR2BP31323 418 aa24.08■■□□□ 1.45
TFF3-204ENST00000518498 PRR5LQ6MZQ0 368 aa24.08■■□□□ 1.45
TFF3-204ENST00000518498 CCDC24Q8N4L8 307 aa24.08■■□□□ 1.45
TFF3-204ENST00000518498 KCNQ3O43525 872 aa24.07■■□□□ 1.44
TFF3-204ENST00000518498 DPY19L2Q6NUT2 758 aa24.07■■□□□ 1.44
TFF3-204ENST00000518498 NUDCQ9Y266 331 aa24.07■■□□□ 1.44
TFF3-204ENST00000518498 CEMIPQ8WUJ3 1361 aa24.06■■□□□ 1.44
TFF3-204ENST00000518498 NPHP1O15259 732 aa24.06■■□□□ 1.44
TFF3-204ENST00000518498 C21orf2O43822 256 aa24.06■■□□□ 1.44
TFF3-204ENST00000518498 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
TFF3-204ENST00000518498 ZNF219Q9P2Y4 722 aaPredicted RBP24.06■■□□□ 1.44
TFF3-204ENST00000518498 JMYQ8N9B5 988 aa24.05■■□□□ 1.44
TFF3-204ENST00000518498 USP16Q9Y5T5 823 aa24.05■■□□□ 1.44
TFF3-204ENST00000518498 SIPA1L3O60292 1781 aaPredicted RBP24.04■■□□□ 1.44
TFF3-204ENST00000518498 CAMTA2O94983 1202 aa24.04■■□□□ 1.44
TFF3-204ENST00000518498 DZIP3Q86Y13 1208 aaKnown RBP24.04■■□□□ 1.44
TFF3-204ENST00000518498 CNBD1Q8NA66 436 aa24.03■■□□□ 1.44
TFF3-204ENST00000518498 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
TFF3-204ENST00000518498 CNKSR1Q969H4 720 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms