RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 CYP27B1O15528 508 aa10.04□□□□□ -0.8
ARFGEF1-204ENST00000518290 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
ARFGEF1-204ENST00000518290 HDGFL1Q5TGJ6 251 aa10.04□□□□□ -0.8
ARFGEF1-204ENST00000518290 SSH3Q8TE77 659 aa10.04□□□□□ -0.8
ARFGEF1-204ENST00000518290 DDX17Q92841 729 aaKnown RBP10.04□□□□□ -0.8
ARFGEF1-204ENST00000518290 HYPKQ9NX55 129 aa10.04□□□□□ -0.8
ARFGEF1-204ENST00000518290 SLIT2O94813 1529 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 GNAI2P04899 355 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 TEFQ10587 303 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 RAPGEF4Q8WZA2 1011 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 USP44Q9H0E7 712 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 DDX21Q9NR30 783 aaKnown RBP eCLIP10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 LRP5O75197 1615 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 RGS3P49796 1198 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 ZNF790Q6PG37 636 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 PLEKHM2Q8IWE5 1019 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 STAP2Q9UGK3 403 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 SPEF2Q9C093 1822 aa10.03□□□□□ -0.8
ARFGEF1-204ENST00000518290 ARAP2Q8WZ64 1704 aa10.02□□□□□ -0.8
ARFGEF1-204ENST00000518290 HMMRO75330 724 aa10.02□□□□□ -0.8
ARFGEF1-204ENST00000518290 MPRIPQ6WCQ1 1025 aa10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 EPB41L2O43491 1005 aaKnown RBP10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 KCNQ3O43525 872 aa10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 SEC24BO95487 1268 aa10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 IL27Q8NEV9 243 aa10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 UBE2Q2Q8WVN8 375 aa10.02□□□□□ -0.81
ARFGEF1-204ENST00000518290 CHPF2Q9P2E5 772 aa10.01□□□□□ -0.81
ARFGEF1-204ENST00000518290 TTC22Q5TAA0 569 aa10.01□□□□□ -0.81
ARFGEF1-204ENST00000518290 CASZ1Q86V15 1759 aa10.01□□□□□ -0.81
ARFGEF1-204ENST00000518290 KSR2Q6VAB6 950 aa10□□□□□ -0.81
ARFGEF1-204ENST00000518290 DNAAF4Q8WXU2 420 aa10□□□□□ -0.81
ARFGEF1-204ENST00000518290 MYH3P11055 1940 aa10□□□□□ -0.81
ARFGEF1-204ENST00000518290 NHSQ6T4R5 1651 aa10□□□□□ -0.81
ARFGEF1-204ENST00000518290 RAB11FIP3O75154 756 aa10□□□□□ -0.81
ARFGEF1-204ENST00000518290 GSPT1P15170 499 aaKnown RBP10□□□□□ -0.81
ARFGEF1-204ENST00000518290 C1orf115Q9H7X2 142 aa10□□□□□ -0.81
ARFGEF1-204ENST00000518290 PHAXQ9H814 394 aaKnown RBP10□□□□□ -0.81
ARFGEF1-204ENST00000518290 FKBP5Q13451 457 aaPredicted RBP9.99□□□□□ -0.81
ARFGEF1-204ENST00000518290 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
ARFGEF1-204ENST00000518290 BCL9O00512 1426 aa9.99□□□□□ -0.81
ARFGEF1-204ENST00000518290 F6X3S4 739 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 IL2RBP14784 551 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 CABLES1Q8TDN4 633 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 SNX21Q969T3 373 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 HDAC5Q9UQL6 1122 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 SCN7AQ01118 1682 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 NLRP2Q9NX02 1062 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 LY75O60449 1722 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 SNRPA1P09661 255 aaKnown RBP9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 LINS1Q8NG48 757 aa9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 ZBTB47Q9UFB7 747 aaPredicted RBP9.98□□□□□ -0.81
ARFGEF1-204ENST00000518290 NUP98P52948 1817 aa9.97□□□□□ -0.81
ARFGEF1-204ENST00000518290 ANKRD45Q5TZF3 282 aa9.97□□□□□ -0.81
ARFGEF1-204ENST00000518290 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
ARFGEF1-204ENST00000518290 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
ARFGEF1-204ENST00000518290 THRAP3Q9Y2W1 955 aaKnown RBP9.97□□□□□ -0.81
ARFGEF1-204ENST00000518290 COL24A1Q17RW2 1714 aa9.96□□□□□ -0.81
ARFGEF1-204ENST00000518290 PRDM11Q9NQV5 511 aa9.96□□□□□ -0.81
ARFGEF1-204ENST00000518290 CDC45O75419 566 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 DDIT3P35638 169 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 KIF2CQ99661 725 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 PNMA6EA0A0J9YXQ4 647 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 PROSER3Q2NL68 480 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 RABL6Q3YEC7 729 aaPredicted RBP9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 TICAM2Q86XR7 235 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 CDCA7Q9BWT1 371 aaPredicted RBP9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 USP35Q9P2H5 1018 aa9.96□□□□□ -0.82
ARFGEF1-204ENST00000518290 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 CASP7P55210 303 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 TBC1D9Q6ZT07 1266 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 ANTXR1Q9H6X2 564 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 SBF2Q86WG5 1849 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 PI4KAP2A4QPH2 592 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 DDX58O95786 925 aaKnown RBP9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 PI4KAP1Q8N8J0 262 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 NFATC2IPQ8NCF5 419 aa9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 ZNF496Q96IT1 587 aaPredicted RBP9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 METTL22Q9BUU2 404 aaPredicted RBP9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
ARFGEF1-204ENST00000518290 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 LRRCC1Q9C099 1032 aa9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 UPF2Q9HAU5 1272 aaKnown RBP9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 RFX7Q2KHR2 1363 aa9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 PDE1AP54750 535 aa9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 NBR1Q14596 966 aa9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 HSP90AB4PQ58FF6 505 aa9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 LARP1Q6PKG0 1096 aaKnown RBP9.94□□□□□ -0.82
ARFGEF1-204ENST00000518290 IGKV5-2P06315 115 aa9.93□□□□□ -0.82
ARFGEF1-204ENST00000518290 C22orf23Q9BZE7 217 aa9.93□□□□□ -0.82
ARFGEF1-204ENST00000518290 SNRKQ9NRH2 765 aa9.93□□□□□ -0.82
ARFGEF1-204ENST00000518290 JCADQ9P266 1359 aa9.93□□□□□ -0.82
ARFGEF1-204ENST00000518290 TAF1LQ8IZX4 1826 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms