RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 FLIIQ13045 1269 aa9.55□□□□□ -0.88
CPS1-210ENST00000518043 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
CPS1-210ENST00000518043 DIEXFQ68CQ4 756 aaKnown RBP9.55□□□□□ -0.88
CPS1-210ENST00000518043 DESI1Q6ICB0 168 aa9.55□□□□□ -0.88
CPS1-210ENST00000518043 WAPLQ7Z5K2 1190 aa9.55□□□□□ -0.88
CPS1-210ENST00000518043 KCNA6P17658 529 aa9.54□□□□□ -0.88
CPS1-210ENST00000518043 KCNC4Q03721 635 aa9.54□□□□□ -0.88
CPS1-210ENST00000518043 CTDSPL2Q05D32 466 aa9.54□□□□□ -0.88
CPS1-210ENST00000518043 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
CPS1-210ENST00000518043 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
CPS1-210ENST00000518043 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 TMF1P82094 1093 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 MCM6Q14566 821 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 AMOTL2Q9Y2J4 779 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 CDC42BPGQ6DT37 1551 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 ATP7BP35670 1465 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
CPS1-210ENST00000518043 JUNDP17535 347 aa9.52□□□□□ -0.89
CPS1-210ENST00000518043 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.89
CPS1-210ENST00000518043 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
CPS1-210ENST00000518043 SNRKQ9NRH2 765 aa9.52□□□□□ -0.89
CPS1-210ENST00000518043 RGPD8O14715 1765 aaPredicted RBP9.51□□□□□ -0.89
CPS1-210ENST00000518043 SLC6A16Q9GZN6 736 aa9.51□□□□□ -0.89
CPS1-210ENST00000518043 AKAP12Q02952 1782 aa9.5□□□□□ -0.89
CPS1-210ENST00000518043 ADGRL3Q9HAR2 1447 aa9.5□□□□□ -0.89
CPS1-210ENST00000518043 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
CPS1-210ENST00000518043 DXOO77932 396 aaKnown RBP9.5□□□□□ -0.89
CPS1-210ENST00000518043 MMP16P51512 607 aa9.5□□□□□ -0.89
CPS1-210ENST00000518043 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
CPS1-210ENST00000518043 LRRN4Q8WUT4 740 aa9.5□□□□□ -0.89
CPS1-210ENST00000518043 PUS7Q96PZ0 661 aaKnown RBP9.5□□□□□ -0.89
CPS1-210ENST00000518043 PRR36Q9H6K5 1346 aa9.5□□□□□ -0.89
CPS1-210ENST00000518043 MON2Q7Z3U7 1717 aa9.49□□□□□ -0.89
CPS1-210ENST00000518043 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
CPS1-210ENST00000518043 MTMR14Q8NCE2 650 aa9.49□□□□□ -0.89
CPS1-210ENST00000518043 POGKQ9P215 609 aa9.49□□□□□ -0.89
CPS1-210ENST00000518043 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
CPS1-210ENST00000518043 NRKQ7Z2Y5 1582 aa9.49□□□□□ -0.89
CPS1-210ENST00000518043 S1PR4O95977 384 aa9.48□□□□□ -0.89
CPS1-210ENST00000518043 PTPRNQ16849 979 aa9.48□□□□□ -0.89
CPS1-210ENST00000518043 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
CPS1-210ENST00000518043 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
CPS1-210ENST00000518043 SOCS7O14512 581 aa9.47□□□□□ -0.89
CPS1-210ENST00000518043 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
CPS1-210ENST00000518043 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
CPS1-210ENST00000518043 POLR3GLQ9BT43 218 aa9.47□□□□□ -0.89
CPS1-210ENST00000518043 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
CPS1-210ENST00000518043 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
CPS1-210ENST00000518043 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CPS1-210ENST00000518043 LRRC7Q96NW7 1537 aa9.46□□□□□ -0.89
CPS1-210ENST00000518043 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
CPS1-210ENST00000518043 SLC12A5Q9H2X9 1139 aa9.46□□□□□ -0.9
CPS1-210ENST00000518043 PANK3Q9H999 370 aa9.46□□□□□ -0.9
CPS1-210ENST00000518043 NINLQ9Y2I6 1382 aa9.46□□□□□ -0.9
CPS1-210ENST00000518043 LTBP4Q8N2S1 1624 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 NUDT12Q9BQG2 462 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 ZNF335Q9H4Z2 1342 aaPredicted RBP9.45□□□□□ -0.9
CPS1-210ENST00000518043 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 ANKRD36BQ8N2N9 1353 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
CPS1-210ENST00000518043 ANKARQ7Z5J8 1434 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
CPS1-210ENST00000518043 APBB1O00213 710 aa9.44□□□□□ -0.9
CPS1-210ENST00000518043 CCNYL3P0C7X3 344 aa9.44□□□□□ -0.9
CPS1-210ENST00000518043 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
CPS1-210ENST00000518043 TMEM94Q12767 1356 aa9.44□□□□□ -0.9
CPS1-210ENST00000518043 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
CPS1-210ENST00000518043 PPIP5K1Q6PFW1 1433 aa9.44□□□□□ -0.9
CPS1-210ENST00000518043 NCOA3Q9Y6Q9 1424 aa9.44□□□□□ -0.9
CPS1-210ENST00000518043 MARF1Q9Y4F3 1742 aaKnown RBP9.43□□□□□ -0.9
CPS1-210ENST00000518043 NSD3Q9BZ95 1437 aa9.43□□□□□ -0.9
CPS1-210ENST00000518043 NPC1L1Q9UHC9 1359 aa9.43□□□□□ -0.9
CPS1-210ENST00000518043 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
CPS1-210ENST00000518043 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
CPS1-210ENST00000518043 NR6A1Q15406 480 aa9.43□□□□□ -0.9
CPS1-210ENST00000518043 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
CPS1-210ENST00000518043 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
CPS1-210ENST00000518043 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
CPS1-210ENST00000518043 DCCP43146 1447 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 MST1RQ04912 1400 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 SSH2Q76I76 1423 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 GGCXP38435 758 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 PPP1R18Q6NYC8 613 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 EPS8L1Q8TE68 723 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
CPS1-210ENST00000518043 EVA1BQ9NVM1 165 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 MAP10Q9P2G4 905 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
CPS1-210ENST00000518043 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
CPS1-210ENST00000518043 POLR3AO14802 1390 aaPredicted RBP9.41□□□□□ -0.9
CPS1-210ENST00000518043 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
CPS1-210ENST00000518043 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
CPS1-210ENST00000518043 CTHP32929 405 aa9.41□□□□□ -0.9
CPS1-210ENST00000518043 KCNH2Q12809 1159 aa9.41□□□□□ -0.9
CPS1-210ENST00000518043 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
CPS1-210ENST00000518043 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
CPS1-210ENST00000518043 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
CPS1-210ENST00000518043 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms