RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
SPIDR-204ENST00000517824 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
SPIDR-204ENST00000517824 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
SPIDR-204ENST00000517824 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
SPIDR-204ENST00000517824 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
SPIDR-204ENST00000517824 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
SPIDR-204ENST00000517824 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
SPIDR-204ENST00000517824 GNAI2P04899 355 aa13.39□□□□□ -0.27
SPIDR-204ENST00000517824 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
SPIDR-204ENST00000517824 MFAP1P55081 439 aaKnown RBP13.38□□□□□ -0.27
SPIDR-204ENST00000517824 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
SPIDR-204ENST00000517824 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
SPIDR-204ENST00000517824 CPDO75976 1380 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 F6X3S4 739 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 EIF2S2P20042 333 aaKnown RBP13.37□□□□□ -0.27
SPIDR-204ENST00000517824 NBR1Q14596 966 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 BMP2KLQ5H9B9 411 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 G2E3Q7L622 706 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 MEIS3Q99687 375 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
SPIDR-204ENST00000517824 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
SPIDR-204ENST00000517824 A0A0G2JS52 829 aa13.36□□□□□ -0.27
SPIDR-204ENST00000517824 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
SPIDR-204ENST00000517824 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
SPIDR-204ENST00000517824 MEGF6O75095 1541 aa13.35□□□□□ -0.27
SPIDR-204ENST00000517824 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-204ENST00000517824 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
SPIDR-204ENST00000517824 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
SPIDR-204ENST00000517824 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
SPIDR-204ENST00000517824 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
SPIDR-204ENST00000517824 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
SPIDR-204ENST00000517824 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
SPIDR-204ENST00000517824 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
SPIDR-204ENST00000517824 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-204ENST00000517824 APBB1O00213 710 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 CDC45O75419 566 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
SPIDR-204ENST00000517824 BAG6P46379 1132 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 TBC1D32Q96NH3 1257 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 DCTPP1Q9H773 170 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 MRC1P22897 1456 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
SPIDR-204ENST00000517824 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-204ENST00000517824 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
SPIDR-204ENST00000517824 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
SPIDR-204ENST00000517824 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
SPIDR-204ENST00000517824 SRCIN1Q9C0H9 1055 aa13.33□□□□□ -0.28
SPIDR-204ENST00000517824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.33□□□□□ -0.285e-8■■■■□ 20.5
SPIDR-204ENST00000517824 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
SPIDR-204ENST00000517824 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-204ENST00000517824 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
SPIDR-204ENST00000517824 SIRT2Q8IXJ6 389 aa13.32□□□□□ -0.28
SPIDR-204ENST00000517824 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
SPIDR-204ENST00000517824 SHANK3Q9BYB0 1731 aa13.32□□□□□ -0.28
SPIDR-204ENST00000517824 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
SPIDR-204ENST00000517824 LRP5O75197 1615 aa13.31□□□□□ -0.28
SPIDR-204ENST00000517824 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
SPIDR-204ENST00000517824 HSCBQ8IWL3 235 aa13.31□□□□□ -0.28
SPIDR-204ENST00000517824 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
SPIDR-204ENST00000517824 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
SPIDR-204ENST00000517824 SEC24BO95487 1268 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 DNAAF4Q8WXU2 420 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
SPIDR-204ENST00000517824 KDM6AO15550 1401 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-204ENST00000517824 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-204ENST00000517824 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
SPIDR-204ENST00000517824 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SPIDR-204ENST00000517824 PHKG2P15735 406 aa13.29□□□□□ -0.28
SPIDR-204ENST00000517824 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
SPIDR-204ENST00000517824 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
SPIDR-204ENST00000517824 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
SPIDR-204ENST00000517824 LRRFIP2Q9Y608 721 aaKnown RBP13.29□□□□□ -0.28
SPIDR-204ENST00000517824 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
SPIDR-204ENST00000517824 WDR17Q8IZU2 1322 aa13.28□□□□□ -0.28
SPIDR-204ENST00000517824 ITGB4P16144 1822 aa13.27□□□□□ -0.28
SPIDR-204ENST00000517824 KCNQ3O43525 872 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 CABP4P57796 275 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 EVA1CP58658 441 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-204ENST00000517824 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
SPIDR-204ENST00000517824 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.29
SPIDR-204ENST00000517824 HSP90AB4PQ58FF6 505 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
SPIDR-204ENST00000517824 STRN4Q9NRL3 753 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
SPIDR-204ENST00000517824 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-204ENST00000517824 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
SPIDR-204ENST00000517824 ATP8B2P98198 1209 aa13.26□□□□□ -0.29
SPIDR-204ENST00000517824 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
SPIDR-204ENST00000517824 TBC1D9Q6ZT07 1266 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms