RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 DICER1Q9UPY3 1922 aaKnown RBP12.44□□□□□ -0.42
LINCR-0001-201ENST00000517732 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
LINCR-0001-201ENST00000517732 NRXN2Q9P2S2 1712 aa12.43□□□□□ -0.42
LINCR-0001-201ENST00000517732 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
LINCR-0001-201ENST00000517732 VEGFAP15692 232 aaPredicted RBP12.42□□□□□ -0.42
LINCR-0001-201ENST00000517732 LMNB1P20700 586 aa12.42□□□□□ -0.42
LINCR-0001-201ENST00000517732 PRELPP51888 382 aa12.42□□□□□ -0.42
LINCR-0001-201ENST00000517732 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
LINCR-0001-201ENST00000517732 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
LINCR-0001-201ENST00000517732 RASSF7Q02833 373 aa12.41□□□□□ -0.42
LINCR-0001-201ENST00000517732 CACNA1SQ13698 1873 aa12.41□□□□□ -0.42
LINCR-0001-201ENST00000517732 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
LINCR-0001-201ENST00000517732 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
LINCR-0001-201ENST00000517732 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
LINCR-0001-201ENST00000517732 TM4SF1P30408 202 aa12.4□□□□□ -0.42
LINCR-0001-201ENST00000517732 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
LINCR-0001-201ENST00000517732 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
LINCR-0001-201ENST00000517732 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
LINCR-0001-201ENST00000517732 COL15A1P39059 1388 aa12.39□□□□□ -0.43
LINCR-0001-201ENST00000517732 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 H0YIN7 160 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
LINCR-0001-201ENST00000517732 SERPINB2P05120 415 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 NFIXQ14938 502 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 MORC1Q86VD1 984 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 SLC52A2Q9HAB3 445 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 UBR2Q8IWV8 1755 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
LINCR-0001-201ENST00000517732 MRC1P22897 1456 aa12.36□□□□□ -0.43
LINCR-0001-201ENST00000517732 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
LINCR-0001-201ENST00000517732 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
LINCR-0001-201ENST00000517732 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
LINCR-0001-201ENST00000517732 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
LINCR-0001-201ENST00000517732 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
LINCR-0001-201ENST00000517732 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
LINCR-0001-201ENST00000517732 A0A087WZG4 1122 aa12.34□□□□□ -0.43
LINCR-0001-201ENST00000517732 PANK3Q9H999 370 aa12.34□□□□□ -0.43
LINCR-0001-201ENST00000517732 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
LINCR-0001-201ENST00000517732 SCN4AP35499 1836 aa12.34□□□□□ -0.43
LINCR-0001-201ENST00000517732 PDE6BP35913 854 aa12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 NPM2Q86SE8 214 aaKnown RBP12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINCR-0001-201ENST00000517732 NFKBIEO00221 500 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 NPHP1O15259 732 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 RNMTO43148 476 aaKnown RBP12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 STARD3NLO95772 234 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 IL13P35225 146 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
LINCR-0001-201ENST00000517732 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
LINCR-0001-201ENST00000517732 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINCR-0001-201ENST00000517732 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
LINCR-0001-201ENST00000517732 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
LINCR-0001-201ENST00000517732 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
LINCR-0001-201ENST00000517732 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
LINCR-0001-201ENST00000517732 SLX4Q8IY92 1834 aa12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 C21orf2O43822 256 aa12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 SOGA3Q5TF21 947 aa12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 MKRN1Q9UHC7 482 aaKnown RBP12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
LINCR-0001-201ENST00000517732 IQCA1LA6NCM1 817 aa12.29□□□□□ -0.44
LINCR-0001-201ENST00000517732 POTECB2RU33 542 aa12.29□□□□□ -0.44
LINCR-0001-201ENST00000517732 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
LINCR-0001-201ENST00000517732 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
LINCR-0001-201ENST00000517732 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
LINCR-0001-201ENST00000517732 LTBP3Q9NS15 1303 aa12.29□□□□□ -0.44
LINCR-0001-201ENST00000517732 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
LINCR-0001-201ENST00000517732 HMOX1P09601 288 aa12.28□□□□□ -0.44
LINCR-0001-201ENST00000517732 EIF5P55010 431 aaKnown RBP12.28□□□□□ -0.44
LINCR-0001-201ENST00000517732 ST5P78524 1137 aa12.28□□□□□ -0.44
LINCR-0001-201ENST00000517732 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
LINCR-0001-201ENST00000517732 TEFQ10587 303 aa12.27□□□□□ -0.45
LINCR-0001-201ENST00000517732 TBC1D9BQ66K14 1250 aa12.27□□□□□ -0.45
LINCR-0001-201ENST00000517732 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
LINCR-0001-201ENST00000517732 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
LINCR-0001-201ENST00000517732 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
LINCR-0001-201ENST00000517732 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 STYK1Q6J9G0 422 aa12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 LDHDQ86WU2 507 aa12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 HEG1Q9ULI3 1381 aa12.26□□□□□ -0.45
LINCR-0001-201ENST00000517732 IL6STP40189 918 aaPredicted RBP12.25□□□□□ -0.45
LINCR-0001-201ENST00000517732 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms