RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 TNRC18O15417 2968 aaPredicted RBP14.25□□□□□ -0.13
PDGFRB-203ENST00000517660 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
PDGFRB-203ENST00000517660 ZC3H4Q9UPT8 1303 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-203ENST00000517660 RGS19P49795 217 aa14.24□□□□□ -0.13
PDGFRB-203ENST00000517660 NFATC2IPQ8NCF5 419 aa14.24□□□□□ -0.13
PDGFRB-203ENST00000517660 ARHGEF1Q92888 912 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-203ENST00000517660 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
PDGFRB-203ENST00000517660 CTCFP49711 727 aaPredicted RBP14.23□□□□□ -0.13
PDGFRB-203ENST00000517660 LBX1P52954 281 aa14.23□□□□□ -0.13
PDGFRB-203ENST00000517660 DDR1Q08345 913 aa14.23□□□□□ -0.13
PDGFRB-203ENST00000517660 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
PDGFRB-203ENST00000517660 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
PDGFRB-203ENST00000517660 TRAPPC3LQ5T215 181 aa14.22□□□□□ -0.13
PDGFRB-203ENST00000517660 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 U2SURPO15042 1029 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 MLLT1Q03111 559 aaPredicted RBP14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 RC3H1Q5TC82 1133 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 LGR6Q9HBX8 967 aa14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 WBP1LQ9NX94 342 aa14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
PDGFRB-203ENST00000517660 RNMTO43148 476 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-203ENST00000517660 HSPA8P11142 646 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-203ENST00000517660 RTCBQ9Y3I0 505 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-203ENST00000517660 COL5A3P25940 1745 aaPredicted RBP14.19□□□□□ -0.14
PDGFRB-203ENST00000517660 PTCD1O75127 700 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-203ENST00000517660 LMNB1P20700 586 aa14.19□□□□□ -0.14
PDGFRB-203ENST00000517660 VEGFBP49765 207 aa14.19□□□□□ -0.14
PDGFRB-203ENST00000517660 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
PDGFRB-203ENST00000517660 PPP2R1AP30153 589 aa14.18□□□□□ -0.14
PDGFRB-203ENST00000517660 FKBP8Q14318 412 aa14.18□□□□□ -0.14
PDGFRB-203ENST00000517660 NUDCQ9Y266 331 aa14.18□□□□□ -0.14
PDGFRB-203ENST00000517660 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
PDGFRB-203ENST00000517660 PASKQ96RG2 1323 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 CNTNAP4Q9C0A0 1308 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 NFKBIEO00221 500 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 ADRA2BP18089 450 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 GAS2L2Q8NHY3 880 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 SRP68Q9UHB9 627 aaKnown RBP14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
PDGFRB-203ENST00000517660 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
PDGFRB-203ENST00000517660 COL3A1P02461 1466 aaPredicted RBP14.16□□□□□ -0.14
PDGFRB-203ENST00000517660 ADAMTS7Q9UKP4 1686 aa14.15□□□□□ -0.14
PDGFRB-203ENST00000517660 POLRMTO00411 1230 aaKnown RBP14.15□□□□□ -0.14
PDGFRB-203ENST00000517660 RFC4P35249 363 aa14.15□□□□□ -0.14
PDGFRB-203ENST00000517660 AIDAQ96BJ3 306 aa14.15□□□□□ -0.14
PDGFRB-203ENST00000517660 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
PDGFRB-203ENST00000517660 CRKLP46109 303 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-203ENST00000517660 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
PDGFRB-203ENST00000517660 MYH14Q7Z406 1995 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-203ENST00000517660 USP42Q9H9J4 1324 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-203ENST00000517660 CCDC85CA6NKD9 419 aa14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 U2AF1L5P0DN76 240 aaPredicted RBP14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 TM4SF1P30408 202 aa14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 U2AF1Q01081 240 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 IL17REQ8NFR9 667 aa14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 RSPH6AQ9H0K4 717 aa14.13□□□□□ -0.15
PDGFRB-203ENST00000517660 INTS5Q6P9B9 1019 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-203ENST00000517660 DNAJC10Q8IXB1 793 aa14.12□□□□□ -0.15
PDGFRB-203ENST00000517660 PHACTR3Q96KR7 559 aa14.12□□□□□ -0.15
PDGFRB-203ENST00000517660 DLEC1Q9Y238 1755 aa14.11□□□□□ -0.15
PDGFRB-203ENST00000517660 TEFQ10587 303 aa14.11□□□□□ -0.15
PDGFRB-203ENST00000517660 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
PDGFRB-203ENST00000517660 ITGBL1O95965 494 aaPredicted RBP14.1□□□□□ -0.15
PDGFRB-203ENST00000517660 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
PDGFRB-203ENST00000517660 TTC5Q8N0Z6 440 aa14.1□□□□□ -0.15
PDGFRB-203ENST00000517660 MRC1P22897 1456 aa14.09□□□□□ -0.15
PDGFRB-203ENST00000517660 CCDC88AQ3V6T2 1871 aa14.09□□□□□ -0.15
PDGFRB-203ENST00000517660 NRXN2Q9P2S2 1712 aa14.09□□□□□ -0.15
PDGFRB-203ENST00000517660 RASSF10A6NK89 507 aa14.08□□□□□ -0.16
PDGFRB-203ENST00000517660 TMEM88BA6NKF7 163 aa14.08□□□□□ -0.16
PDGFRB-203ENST00000517660 DDNO94850 711 aaPredicted RBP14.08□□□□□ -0.16
PDGFRB-203ENST00000517660 ZNF790Q6PG37 636 aa14.08□□□□□ -0.16
PDGFRB-203ENST00000517660 CARMIL3Q8ND23 1372 aa14.08□□□□□ -0.16
PDGFRB-203ENST00000517660 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.16
PDGFRB-203ENST00000517660 STARD3NLO95772 234 aa14.07□□□□□ -0.16
PDGFRB-203ENST00000517660 RTF1Q92541 710 aaKnown RBP14.07□□□□□ -0.16
PDGFRB-203ENST00000517660 TEX13AQ9BXU3 409 aaPredicted RBP14.07□□□□□ -0.16
PDGFRB-203ENST00000517660 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 ZPR1O75312 459 aa14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 DPY19L2Q6NUT2 758 aa14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 TTLL6Q8N841 843 aa14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 SOS1Q07889 1333 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 TJP1Q07157 1748 aa14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-203ENST00000517660 SCN11AQ9UI33 1791 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 NEFMP07197 916 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 RALBP1Q15311 655 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 ERFEQ4G0M1 354 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 LDHDQ86WU2 507 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 FMNL2Q96PY5 1086 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 ZBTB1Q9Y2K1 713 aa14.05□□□□□ -0.16
PDGFRB-203ENST00000517660 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms