RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SLC4A10Q6U841 1118 aa9.65□□□□□ -0.86
SCARNA20.1-201ENST00000516009 HYPKQ9NX55 129 aa9.65□□□□□ -0.86
SCARNA20.1-201ENST00000516009 F6X3S4 739 aa9.64□□□□□ -0.87
SCARNA20.1-201ENST00000516009 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PHAXQ9H814 394 aaKnown RBP9.64□□□□□ -0.87
SCARNA20.1-201ENST00000516009 DDX21Q9NR30 783 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCARNA20.1-201ENST00000516009 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
SCARNA20.1-201ENST00000516009 IGHDP01880 384 aa9.63□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ANXA1P04083 346 aa9.63□□□□□ -0.87
SCARNA20.1-201ENST00000516009 FAM98CQ17RN3 349 aaKnown RBP9.63□□□□□ -0.87
SCARNA20.1-201ENST00000516009 BCL9O00512 1426 aa9.63□□□□□ -0.87
SCARNA20.1-201ENST00000516009 AFF2P51816 1311 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 A0A0G2JS52 829 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PTCD1O75127 700 aaKnown RBP9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 DDX58O95786 925 aaKnown RBP9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 MYT1Q01538 1121 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 HDAC1Q13547 482 aaPredicted RBP9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PROSER3Q2NL68 480 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 MARCH10Q8NA82 808 aaPredicted RBP9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PIGBQ92521 554 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 USP16Q9Y5T5 823 aa9.62□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ARFGEF2Q9Y6D5 1785 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PI4KAP2A4QPH2 592 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PDIA6Q15084 440 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 PI4KAP1Q8N8J0 262 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 DNAAF4Q8WXU2 420 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ATG3Q9NT62 314 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ASAP1Q9ULH1 1129 aa9.61□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ATRNO75882 1429 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ATP10DQ9P241 1426 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 MYL6BP14649 208 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 KSR2Q6VAB6 950 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 GJD4Q96KN9 370 aaPredicted RBP9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 MEIS3Q99687 375 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 TEX13AQ9BXU3 409 aaPredicted RBP9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 SRCIN1Q9C0H9 1055 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 TRPC5Q9UL62 973 aaPredicted RBP9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 AFDNP55196 1824 aaKnown RBP9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 ADCY9O60503 1353 aa9.6□□□□□ -0.87
SCARNA20.1-201ENST00000516009 TJP1Q07157 1748 aa9.59□□□□□ -0.87
SCARNA20.1-201ENST00000516009 GNAI3P08754 354 aa9.59□□□□□ -0.87
SCARNA20.1-201ENST00000516009 AIMP1Q12904 312 aaKnown RBP9.59□□□□□ -0.87
SCARNA20.1-201ENST00000516009 XAGE3Q8WTP9 111 aa9.59□□□□□ -0.87
SCARNA20.1-201ENST00000516009 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
SCARNA20.1-201ENST00000516009 MAP3K2Q9Y2U5 619 aa9.59□□□□□ -0.87
SCARNA20.1-201ENST00000516009 CICQ96RK0 1608 aaPredicted RBP9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ALDH1L1O75891 902 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 STARD3NLO95772 234 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 GNAI2P04899 355 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 COPS6Q7L5N1 327 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 RIC3Q7Z5B4 369 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SMC5Q8IY18 1101 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ACSBG1Q96GR2 724 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NUP188Q5SRE5 1749 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NHSQ6T4R5 1651 aa9.58□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SBF2Q86WG5 1849 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 PIP4K2AP48426 406 aaPredicted RBP9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NEXNQ0ZGT2 675 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NBPF10Q6P3W6 841 aaKnown RBP9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 LRP10Q7Z4F1 713 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 DNAJC10Q8IXB1 793 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 NBPF15Q8N660 670 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ANKRD44Q8N8A2 993 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 GCC1Q96CN9 775 aa9.57□□□□□ -0.88
SCARNA20.1-201ENST00000516009 BTAF1O14981 1849 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ZNF831Q5JPB2 1677 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 HMMRO75330 724 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 A1BGP04217 495 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 UBTFL1P0CB47 393 aaPredicted RBP9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 CEP85Q6P2H3 762 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SIRT2Q8IXJ6 389 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 LINS1Q8NG48 757 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 USP44Q9H0E7 712 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
SCARNA20.1-201ENST00000516009 IBTKQ9P2D0 1353 aaPredicted RBP9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 BRWD3Q6RI45 1802 aa9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 RGS3P49796 1198 aa9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SKAP1Q86WV1 359 aa9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 PLBD2Q8NHP8 589 aa9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 METTL22Q9BUU2 404 aaPredicted RBP9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 HDAC5Q9UQL6 1122 aa9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 COL5A3P25940 1745 aaPredicted RBP9.55□□□□□ -0.88
SCARNA20.1-201ENST00000516009 PALLDQ8WX93 1383 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 KCNQ2O43526 872 aa9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 CYP19A1P11511 503 aaPredicted RBP9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
SCARNA20.1-201ENST00000516009 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms