RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 CEP350Q5VT06 3117 aa21.94■■□□□ 1.1
TNFRSF25-220ENST00000515145 BRCA1P38398 1863 aaKnown RBP21.92■■□□□ 1.1
TNFRSF25-220ENST00000515145 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF25-220ENST00000515145 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.1
TNFRSF25-220ENST00000515145 USPL1Q5W0Q7 1092 aa21.92■■□□□ 1.1
TNFRSF25-220ENST00000515145 ZNF496Q96IT1 587 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF25-220ENST00000515145 HEG1Q9ULI3 1381 aa21.91■■□□□ 1.1
TNFRSF25-220ENST00000515145 A0A0G2JLW4 131 aa21.91■■□□□ 1.1
TNFRSF25-220ENST00000515145 DPEP1P16444 411 aa21.91■■□□□ 1.1
TNFRSF25-220ENST00000515145 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
TNFRSF25-220ENST00000515145 POLRMTO00411 1230 aaKnown RBP21.9■■□□□ 1.1
TNFRSF25-220ENST00000515145 ZPR1O75312 459 aa21.9■■□□□ 1.1
TNFRSF25-220ENST00000515145 NARFQ9UHQ1 456 aa21.9■■□□□ 1.1
TNFRSF25-220ENST00000515145 FCHSD2O94868 740 aa21.89■■□□□ 1.09
TNFRSF25-220ENST00000515145 TM4SF1P30408 202 aa21.89■■□□□ 1.09
TNFRSF25-220ENST00000515145 BCL2L12Q9HB09 334 aa21.88■■□□□ 1.09
TNFRSF25-220ENST00000515145 BCS1LQ9Y276 419 aa21.88■■□□□ 1.09
TNFRSF25-220ENST00000515145 STARD3NLO95772 234 aa21.87■■□□□ 1.09
TNFRSF25-220ENST00000515145 CANXP27824 592 aaKnown RBP21.87■■□□□ 1.09
TNFRSF25-220ENST00000515145 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
TNFRSF25-220ENST00000515145 KCNA3P22001 575 aa21.86■■□□□ 1.09
TNFRSF25-220ENST00000515145 EIF5P55010 431 aaKnown RBP21.86■■□□□ 1.09
TNFRSF25-220ENST00000515145 NFIXQ14938 502 aa21.86■■□□□ 1.09
TNFRSF25-220ENST00000515145 FMNL2Q96PY5 1086 aa21.86■■□□□ 1.09
TNFRSF25-220ENST00000515145 SCN7AQ01118 1682 aa21.85■■□□□ 1.09
TNFRSF25-220ENST00000515145 AFDNP55196 1824 aaKnown RBP21.85■■□□□ 1.09
TNFRSF25-220ENST00000515145 KCNQ3O43525 872 aa21.85■■□□□ 1.09
TNFRSF25-220ENST00000515145 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
TNFRSF25-220ENST00000515145 BTBD11A6QL63 1104 aa21.84■■□□□ 1.09
TNFRSF25-220ENST00000515145 TEX13AQ9BXU3 409 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF25-220ENST00000515145 MCM10Q7L590 875 aa21.83■■□□□ 1.09
TNFRSF25-220ENST00000515145 RTF1Q92541 710 aaKnown RBP21.83■■□□□ 1.09
TNFRSF25-220ENST00000515145 A0A087WZG4 1122 aa21.82■■□□□ 1.08
TNFRSF25-220ENST00000515145 CHRNA5P30532 468 aa21.81■■□□□ 1.08
TNFRSF25-220ENST00000515145 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF25-220ENST00000515145 PIM2Q9P1W9 311 aa21.81■■□□□ 1.08
TNFRSF25-220ENST00000515145 HTATSF1O43719 755 aaKnown RBP21.8■■□□□ 1.08
TNFRSF25-220ENST00000515145 IL6STP40189 918 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF25-220ENST00000515145 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
TNFRSF25-220ENST00000515145 A1BGP04217 495 aa21.79■■□□□ 1.08
TNFRSF25-220ENST00000515145 SERPINB2P05120 415 aa21.79■■□□□ 1.08
TNFRSF25-220ENST00000515145 ZNF526Q8TF50 670 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF25-220ENST00000515145 CARMIL3Q8ND23 1372 aa21.78■■□□□ 1.08
TNFRSF25-220ENST00000515145 DALRD3Q5D0E6 543 aaKnown RBP21.78■■□□□ 1.08
TNFRSF25-220ENST00000515145 ARHGAP27Q6ZUM4 889 aa21.78■■□□□ 1.08
TNFRSF25-220ENST00000515145 ZNF330Q9Y3S2 320 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF25-220ENST00000515145 DLG5Q8TDM6 1919 aa21.78■■□□□ 1.08
TNFRSF25-220ENST00000515145 BCORQ6W2J9 1755 aa21.77■■□□□ 1.08
TNFRSF25-220ENST00000515145 DLEC1Q9Y238 1755 aa21.77■■□□□ 1.08
TNFRSF25-220ENST00000515145 PRAMEF22A3QJZ6 481 aa21.76■■□□□ 1.07
TNFRSF25-220ENST00000515145 BICDL1Q6ZP65 573 aa21.76■■□□□ 1.07
TNFRSF25-220ENST00000515145 PLEKHF1Q96S99 279 aa21.76■■□□□ 1.07
TNFRSF25-220ENST00000515145 TBC1D2BQ9UPU7 963 aa21.76■■□□□ 1.07
TNFRSF25-220ENST00000515145 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
TNFRSF25-220ENST00000515145 TBC1D9BQ66K14 1250 aa21.75■■□□□ 1.07
TNFRSF25-220ENST00000515145 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
TNFRSF25-220ENST00000515145 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
TNFRSF25-220ENST00000515145 ANKRD31Q8N7Z5 1873 aa21.73■■□□□ 1.07
TNFRSF25-220ENST00000515145 NEFMP07197 916 aa21.73■■□□□ 1.07
TNFRSF25-220ENST00000515145 PIP4K2AP48426 406 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF25-220ENST00000515145 KDM3BQ7LBC6 1761 aa21.73■■□□□ 1.07
TNFRSF25-220ENST00000515145 LAMB4A4D0S4 1761 aa21.72■■□□□ 1.07
TNFRSF25-220ENST00000515145 HSPA6P17066 643 aa21.72■■□□□ 1.07
TNFRSF25-220ENST00000515145 TAF7Q15545 349 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF25-220ENST00000515145 RALBP1Q15311 655 aa21.71■■□□□ 1.07
TNFRSF25-220ENST00000515145 NFE2L2Q16236 605 aa21.71■■□□□ 1.07
TNFRSF25-220ENST00000515145 NPM2Q86SE8 214 aaKnown RBP21.71■■□□□ 1.07
TNFRSF25-220ENST00000515145 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
TNFRSF25-220ENST00000515145 KIF3CO14782 793 aa21.7■■□□□ 1.06
TNFRSF25-220ENST00000515145 C9orf131Q5VYM1 1079 aa21.7■■□□□ 1.06
TNFRSF25-220ENST00000515145 C2CD5Q86YS7 1000 aa21.7■■□□□ 1.06
TNFRSF25-220ENST00000515145 COL11A2P13942 1736 aaPredicted RBP21.69■■□□□ 1.06
TNFRSF25-220ENST00000515145 PRR5LQ6MZQ0 368 aa21.69■■□□□ 1.06
TNFRSF25-220ENST00000515145 MIS18AQ9NYP9 233 aa21.69■■□□□ 1.06
TNFRSF25-220ENST00000515145 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
TNFRSF25-220ENST00000515145 NBPF26B4DH59 902 aa21.68■■□□□ 1.06
TNFRSF25-220ENST00000515145 NBPF10Q6P3W6 841 aaKnown RBP21.68■■□□□ 1.06
TNFRSF25-220ENST00000515145 NBPF15Q8N660 670 aa21.68■■□□□ 1.06
TNFRSF25-220ENST00000515145 SBF1O95248 1867 aa21.67■■□□□ 1.06
TNFRSF25-220ENST00000515145 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
TNFRSF25-220ENST00000515145 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
TNFRSF25-220ENST00000515145 THUMPD2Q9BTF0 503 aaKnown RBP21.67■■□□□ 1.06
TNFRSF25-220ENST00000515145 PNNQ9H307 717 aaKnown RBP21.67■■□□□ 1.06
TNFRSF25-220ENST00000515145 H0YIN7 160 aa21.66■■□□□ 1.06
TNFRSF25-220ENST00000515145 CCDC24Q8N4L8 307 aa21.66■■□□□ 1.06
TNFRSF25-220ENST00000515145 TTLL6Q8N841 843 aa21.66■■□□□ 1.06
TNFRSF25-220ENST00000515145 SETDB2Q96T68 719 aa21.66■■□□□ 1.06
TNFRSF25-220ENST00000515145 BRIP1Q9BX63 1249 aa21.66■■□□□ 1.06
TNFRSF25-220ENST00000515145 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
TNFRSF25-220ENST00000515145 RASSF7Q02833 373 aa21.65■■□□□ 1.06
TNFRSF25-220ENST00000515145 CNBD1Q8NA66 436 aa21.65■■□□□ 1.06
TNFRSF25-220ENST00000515145 MYBBP1AQ9BQG0 1328 aaKnown RBP21.64■■□□□ 1.05
TNFRSF25-220ENST00000515145 PDE6BP35913 854 aa21.64■■□□□ 1.05
TNFRSF25-220ENST00000515145 CLEC4GQ6UXB4 293 aa21.64■■□□□ 1.05
TNFRSF25-220ENST00000515145 PDZRN3Q9UPQ7 1066 aa21.64■■□□□ 1.05
TNFRSF25-220ENST00000515145 RGL2O15211 777 aa21.63■■□□□ 1.05
TNFRSF25-220ENST00000515145 EIF4A1P60842 406 aaKnown RBP21.63■■□□□ 1.05
TNFRSF25-220ENST00000515145 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
TNFRSF25-220ENST00000515145 ZNF652Q9Y2D9 606 aa21.63■■□□□ 1.05
TNFRSF25-220ENST00000515145 ST5P78524 1137 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms