RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 ZBTB40Q9NUA8 1239 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 KCNQ2O43526 872 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 ZNF853P0CG23 659 aa18.33■□□□□ 0.52
APBB3-221ENST00000515056 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.52
APBB3-221ENST00000515056 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
APBB3-221ENST00000515056 BCL9O00512 1426 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 SEC24BO95487 1268 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 SLC4A3P48751 1232 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 PIGBQ92521 554 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
APBB3-221ENST00000515056 CHL1O00533 1208 aa18.31■□□□□ 0.52
APBB3-221ENST00000515056 VAMP4O75379 141 aa18.31■□□□□ 0.52
APBB3-221ENST00000515056 BECN1Q14457 450 aa18.31■□□□□ 0.52
APBB3-221ENST00000515056 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
APBB3-221ENST00000515056 PTF1AQ7RTS3 328 aa18.3■□□□□ 0.52
APBB3-221ENST00000515056 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
APBB3-221ENST00000515056 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
APBB3-221ENST00000515056 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
APBB3-221ENST00000515056 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
APBB3-221ENST00000515056 RRP9O43818 475 aaKnown RBP18.28■□□□□ 0.52
APBB3-221ENST00000515056 MRPL50Q8N5N7 158 aaKnown RBP18.28■□□□□ 0.52
APBB3-221ENST00000515056 TSPYL4Q9UJ04 414 aa18.28■□□□□ 0.52
APBB3-221ENST00000515056 ITGB4P16144 1822 aa18.28■□□□□ 0.52
APBB3-221ENST00000515056 TRIM37O94972 964 aa18.27■□□□□ 0.52
APBB3-221ENST00000515056 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.52
APBB3-221ENST00000515056 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
APBB3-221ENST00000515056 KCNQ3O43525 872 aa18.27■□□□□ 0.51
APBB3-221ENST00000515056 FRAT2O75474 233 aaPredicted RBP18.27■□□□□ 0.51
APBB3-221ENST00000515056 ZNF790Q6PG37 636 aa18.27■□□□□ 0.51
APBB3-221ENST00000515056 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.51
APBB3-221ENST00000515056 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.51
APBB3-221ENST00000515056 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.51
APBB3-221ENST00000515056 MRC1P22897 1456 aa18.27■□□□□ 0.51
APBB3-221ENST00000515056 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
APBB3-221ENST00000515056 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
APBB3-221ENST00000515056 SBF2Q86WG5 1849 aa18.25■□□□□ 0.51
APBB3-221ENST00000515056 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
APBB3-221ENST00000515056 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
APBB3-221ENST00000515056 ZBTB7BO15156 539 aaPredicted RBP18.24■□□□□ 0.51
APBB3-221ENST00000515056 NUCB1Q02818 461 aa18.24■□□□□ 0.51
APBB3-221ENST00000515056 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
APBB3-221ENST00000515056 PTCD1O75127 700 aaKnown RBP18.22■□□□□ 0.51
APBB3-221ENST00000515056 EIF4A1P60842 406 aaKnown RBP18.22■□□□□ 0.51
APBB3-221ENST00000515056 ABCC4O15439 1325 aa18.22■□□□□ 0.51
APBB3-221ENST00000515056 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
APBB3-221ENST00000515056 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
APBB3-221ENST00000515056 GCC1Q96CN9 775 aa18.21■□□□□ 0.51
APBB3-221ENST00000515056 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
APBB3-221ENST00000515056 API5Q9BZZ5 524 aaKnown RBP18.21■□□□□ 0.51
APBB3-221ENST00000515056 HSP90AA2PQ14568 343 aaPredicted RBP18.2■□□□□ 0.5
APBB3-221ENST00000515056 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
APBB3-221ENST00000515056 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
APBB3-221ENST00000515056 NHSQ6T4R5 1651 aa18.2■□□□□ 0.5
APBB3-221ENST00000515056 ELL2O00472 640 aaPredicted RBP18.19■□□□□ 0.5
APBB3-221ENST00000515056 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
APBB3-221ENST00000515056 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
APBB3-221ENST00000515056 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
APBB3-221ENST00000515056 APBA3O96018 575 aa18.18■□□□□ 0.5
APBB3-221ENST00000515056 CHD1LQ86WJ1 897 aa18.18■□□□□ 0.5
APBB3-221ENST00000515056 BTAF1O14981 1849 aa18.18■□□□□ 0.5
APBB3-221ENST00000515056 ILDR2Q71H61 639 aa18.18■□□□□ 0.5
APBB3-221ENST00000515056 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
APBB3-221ENST00000515056 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
APBB3-221ENST00000515056 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
APBB3-221ENST00000515056 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
APBB3-221ENST00000515056 CLCN1P35523 988 aa18.17■□□□□ 0.5
APBB3-221ENST00000515056 SLC4A9Q96Q91 983 aa18.17■□□□□ 0.5
APBB3-221ENST00000515056 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
APBB3-221ENST00000515056 C22orf23Q9BZE7 217 aa18.16■□□□□ 0.5
APBB3-221ENST00000515056 LOC102724428A0A0B4J2F2 783 aa18.16■□□□□ 0.5
APBB3-221ENST00000515056 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
APBB3-221ENST00000515056 PLSCR1O15162 318 aa18.16■□□□□ 0.5
APBB3-221ENST00000515056 SIK1P57059 783 aa18.16■□□□□ 0.5
APBB3-221ENST00000515056 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
APBB3-221ENST00000515056 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
APBB3-221ENST00000515056 BMP2KLQ5H9B9 411 aa18.14■□□□□ 0.5
APBB3-221ENST00000515056 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.5
APBB3-221ENST00000515056 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
APBB3-221ENST00000515056 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
APBB3-221ENST00000515056 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
APBB3-221ENST00000515056 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
APBB3-221ENST00000515056 KCNQ4P56696 695 aa18.13■□□□□ 0.49
APBB3-221ENST00000515056 SF3B2Q13435 895 aaKnown RBP18.13■□□□□ 0.49
APBB3-221ENST00000515056 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
APBB3-221ENST00000515056 PROM2Q8N271 834 aa18.13■□□□□ 0.49
APBB3-221ENST00000515056 INTS3Q68E01 1043 aaKnown RBP18.12■□□□□ 0.49
APBB3-221ENST00000515056 LNPKQ9C0E8 428 aa18.12■□□□□ 0.49
APBB3-221ENST00000515056 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
APBB3-221ENST00000515056 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
APBB3-221ENST00000515056 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
APBB3-221ENST00000515056 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
APBB3-221ENST00000515056 HOXB7P09629 217 aa18.11■□□□□ 0.49
APBB3-221ENST00000515056 RBM25P49756 843 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms