RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 ZNF496Q96IT1 587 aaPredicted RBP23.53■■□□□ 1.36
SIL1-215ENST00000515008 FKBP8Q14318 412 aa23.52■■□□□ 1.36
SIL1-215ENST00000515008 FMNL2Q96PY5 1086 aa23.52■■□□□ 1.36
SIL1-215ENST00000515008 NEFMP07197 916 aa23.51■■□□□ 1.35
SIL1-215ENST00000515008 RALBP1Q15311 655 aa23.51■■□□□ 1.35
SIL1-215ENST00000515008 BTBD11A6QL63 1104 aa23.5■■□□□ 1.35
SIL1-215ENST00000515008 NARFQ9UHQ1 456 aa23.5■■□□□ 1.35
SIL1-215ENST00000515008 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
SIL1-215ENST00000515008 N4BP2Q86UW6 1770 aaPredicted RBP23.49■■□□□ 1.35
SIL1-215ENST00000515008 DDR1Q08345 913 aa23.48■■□□□ 1.35
SIL1-215ENST00000515008 A0A087WZG4 1122 aa23.47■■□□□ 1.35
SIL1-215ENST00000515008 TM4SF1P30408 202 aa23.47■■□□□ 1.35
SIL1-215ENST00000515008 PNNQ9H307 717 aaKnown RBP23.47■■□□□ 1.35
SIL1-215ENST00000515008 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
SIL1-215ENST00000515008 POLRMTO00411 1230 aaKnown RBP23.46■■□□□ 1.35
SIL1-215ENST00000515008 CANXP27824 592 aaKnown RBP23.46■■□□□ 1.35
SIL1-215ENST00000515008 EIF5P55010 431 aaKnown RBP23.46■■□□□ 1.35
SIL1-215ENST00000515008 MCM10Q7L590 875 aa23.46■■□□□ 1.35
SIL1-215ENST00000515008 DLG5Q8TDM6 1919 aa23.46■■□□□ 1.35
SIL1-215ENST00000515008 SCN7AQ01118 1682 aa23.45■■□□□ 1.34
SIL1-215ENST00000515008 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
SIL1-215ENST00000515008 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
SIL1-215ENST00000515008 KCNQ3O43525 872 aa23.43■■□□□ 1.34
SIL1-215ENST00000515008 IL6STP40189 918 aaPredicted RBP23.43■■□□□ 1.34
SIL1-215ENST00000515008 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
SIL1-215ENST00000515008 WWC3Q9ULE0 1092 aa23.43■■□□□ 1.34
SIL1-215ENST00000515008 AFDNP55196 1824 aaKnown RBP23.43■■□□□ 1.34
SIL1-215ENST00000515008 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
SIL1-215ENST00000515008 DPEP1P16444 411 aa23.42■■□□□ 1.34
SIL1-215ENST00000515008 NFIXQ14938 502 aa23.42■■□□□ 1.34
SIL1-215ENST00000515008 BCL2L12Q9HB09 334 aa23.42■■□□□ 1.34
SIL1-215ENST00000515008 ADCY9O60503 1353 aa23.41■■□□□ 1.34
SIL1-215ENST00000515008 MYBBP1AQ9BQG0 1328 aaKnown RBP23.41■■□□□ 1.34
SIL1-215ENST00000515008 MAPK8IP3Q9UPT6 1336 aa23.41■■□□□ 1.34
SIL1-215ENST00000515008 DCTN1Q14203 1278 aa23.41■■□□□ 1.34
SIL1-215ENST00000515008 NFE2L2Q16236 605 aa23.41■■□□□ 1.34
SIL1-215ENST00000515008 ARFGEF1Q9Y6D6 1849 aa23.4■■□□□ 1.34
SIL1-215ENST00000515008 SNRPA1P09661 255 aaKnown RBP23.4■■□□□ 1.34
SIL1-215ENST00000515008 TAF7Q15545 349 aaPredicted RBP23.4■■□□□ 1.34
SIL1-215ENST00000515008 NPM2Q86SE8 214 aaKnown RBP23.4■■□□□ 1.34
SIL1-215ENST00000515008 PNISRQ8TF01 805 aaKnown RBP23.39■■□□□ 1.33
SIL1-215ENST00000515008 BCS1LQ9Y276 419 aa23.39■■□□□ 1.33
SIL1-215ENST00000515008 KDM3BQ7LBC6 1761 aa23.38■■□□□ 1.33
SIL1-215ENST00000515008 A1BGP04217 495 aa23.38■■□□□ 1.33
SIL1-215ENST00000515008 ATP10DQ9P241 1426 aa23.38■■□□□ 1.33
SIL1-215ENST00000515008 LAMB4A4D0S4 1761 aa23.37■■□□□ 1.33
SIL1-215ENST00000515008 BCORQ6W2J9 1755 aa23.37■■□□□ 1.33
SIL1-215ENST00000515008 KCNA3P22001 575 aa23.37■■□□□ 1.33
SIL1-215ENST00000515008 PIM2Q9P1W9 311 aa23.37■■□□□ 1.33
SIL1-215ENST00000515008 SERPINB2P05120 415 aa23.36■■□□□ 1.33
SIL1-215ENST00000515008 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
SIL1-215ENST00000515008 USP16Q9Y5T5 823 aa23.36■■□□□ 1.33
SIL1-215ENST00000515008 DLEC1Q9Y238 1755 aa23.35■■□□□ 1.33
SIL1-215ENST00000515008 TBC1D2BQ9UPU7 963 aa23.34■■□□□ 1.33
SIL1-215ENST00000515008 CARMIL3Q8ND23 1372 aa23.33■■□□□ 1.33
SIL1-215ENST00000515008 GIGYF1O75420 1035 aaPredicted RBP23.33■■□□□ 1.33
SIL1-215ENST00000515008 CAMTA2O94983 1202 aa23.33■■□□□ 1.33
SIL1-215ENST00000515008 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
SIL1-215ENST00000515008 PRAMEF22A3QJZ6 481 aa23.32■■□□□ 1.32
SIL1-215ENST00000515008 TBC1D9BQ66K14 1250 aa23.32■■□□□ 1.32
SIL1-215ENST00000515008 DZIP3Q86Y13 1208 aaKnown RBP23.32■■□□□ 1.32
SIL1-215ENST00000515008 RGL2O15211 777 aa23.31■■□□□ 1.32
SIL1-215ENST00000515008 CHRNA5P30532 468 aa23.31■■□□□ 1.32
SIL1-215ENST00000515008 LMOD3Q0VAK6 560 aa23.3■■□□□ 1.32
SIL1-215ENST00000515008 BICDL1Q6ZP65 573 aa23.3■■□□□ 1.32
SIL1-215ENST00000515008 C1QTNF8P60827 252 aa23.29■■□□□ 1.32
SIL1-215ENST00000515008 CLEC4GQ6UXB4 293 aa23.29■■□□□ 1.32
SIL1-215ENST00000515008 ARHGAP27Q6ZUM4 889 aa23.29■■□□□ 1.32
SIL1-215ENST00000515008 MIS18AQ9NYP9 233 aa23.29■■□□□ 1.32
SIL1-215ENST00000515008 PDZRN3Q9UPQ7 1066 aa23.29■■□□□ 1.32
SIL1-215ENST00000515008 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
SIL1-215ENST00000515008 GPBP1L1Q9HC44 474 aaPredicted RBP23.28■■□□□ 1.32
SIL1-215ENST00000515008 ZNF652Q9Y2D9 606 aa23.28■■□□□ 1.32
SIL1-215ENST00000515008 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
SIL1-215ENST00000515008 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
SIL1-215ENST00000515008 SETDB2Q96T68 719 aa23.27■■□□□ 1.32
SIL1-215ENST00000515008 ANKRD31Q8N7Z5 1873 aa23.27■■□□□ 1.32
SIL1-215ENST00000515008 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
SIL1-215ENST00000515008 TMPOP42166 694 aaKnown RBP23.26■■□□□ 1.31
SIL1-215ENST00000515008 PIP4K2AP48426 406 aaPredicted RBP23.26■■□□□ 1.31
SIL1-215ENST00000515008 RIPK4P57078 832 aa23.26■■□□□ 1.31
SIL1-215ENST00000515008 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
SIL1-215ENST00000515008 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
SIL1-215ENST00000515008 NBPF15Q8N660 670 aa23.26■■□□□ 1.31
SIL1-215ENST00000515008 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
SIL1-215ENST00000515008 H0YIN7 160 aa23.25■■□□□ 1.31
SIL1-215ENST00000515008 PRR5LQ6MZQ0 368 aa23.25■■□□□ 1.31
SIL1-215ENST00000515008 C2CD5Q86YS7 1000 aa23.25■■□□□ 1.31
SIL1-215ENST00000515008 BRIP1Q9BX63 1249 aa23.25■■□□□ 1.31
SIL1-215ENST00000515008 BABAM1Q9NWV8 329 aa23.25■■□□□ 1.31
SIL1-215ENST00000515008 PDE6BP35913 854 aa23.24■■□□□ 1.31
SIL1-215ENST00000515008 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
SIL1-215ENST00000515008 TTLL6Q8N841 843 aa23.23■■□□□ 1.31
SIL1-215ENST00000515008 ST5P78524 1137 aa23.22■■□□□ 1.31
SIL1-215ENST00000515008 RUNDC1Q96C34 613 aa23.22■■□□□ 1.31
SIL1-215ENST00000515008 TSPYL4Q9UJ04 414 aa23.22■■□□□ 1.31
SIL1-215ENST00000515008 ERBB4Q15303 1308 aa23.22■■□□□ 1.31
SIL1-215ENST00000515008 COL11A2P13942 1736 aaPredicted RBP23.22■■□□□ 1.31
SIL1-215ENST00000515008 NPHP1O15259 732 aa23.21■■□□□ 1.31
SIL1-215ENST00000515008 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms