RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 KCNQ2O43526 872 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 APBA3O96018 575 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
SMAD1-213ENST00000514778 CABP4P57796 275 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 CCDC27Q2M243 656 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 IL17REQ8NFR9 667 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
SMAD1-213ENST00000514778 SLC52A2Q9HAB3 445 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 SBF2Q86WG5 1849 aa9.33□□□□□ -0.92
SMAD1-213ENST00000514778 TNS1Q9HBL0 1735 aaKnown RBP9.32□□□□□ -0.92
SMAD1-213ENST00000514778 RIPK4P57078 832 aa9.32□□□□□ -0.92
SMAD1-213ENST00000514778 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
SMAD1-213ENST00000514778 TEFQ10587 303 aa9.32□□□□□ -0.92
SMAD1-213ENST00000514778 SLC27A3Q5K4L6 730 aa9.32□□□□□ -0.92
SMAD1-213ENST00000514778 LCE2DQ5TA82 110 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-213ENST00000514778 PIGBQ92521 554 aa9.32□□□□□ -0.92
SMAD1-213ENST00000514778 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-213ENST00000514778 ACSBG1Q96GR2 724 aa9.32□□□□□ -0.92
SMAD1-213ENST00000514778 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-213ENST00000514778 CAMKK2Q96RR4 588 aa9.32□□□□□ -0.92
SMAD1-213ENST00000514778 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
SMAD1-213ENST00000514778 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
SMAD1-213ENST00000514778 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
SMAD1-213ENST00000514778 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
SMAD1-213ENST00000514778 TOGARAM1Q9Y4F4 1720 aa9.31□□□□□ -0.92
SMAD1-213ENST00000514778 SCN11AQ9UI33 1791 aa9.3□□□□□ -0.92
SMAD1-213ENST00000514778 APAF1O14727 1248 aa9.3□□□□□ -0.92
SMAD1-213ENST00000514778 TAF7Q15545 349 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-213ENST00000514778 CCDC146Q8IYE0 955 aa9.3□□□□□ -0.92
SMAD1-213ENST00000514778 FAM9BQ8IZU0 186 aa9.3□□□□□ -0.92
SMAD1-213ENST00000514778 EP400Q96L91 3159 aa9.29□□□□□ -0.92
SMAD1-213ENST00000514778 MCM10Q7L590 875 aa9.29□□□□□ -0.92
SMAD1-213ENST00000514778 PTF1AQ7RTS3 328 aa9.29□□□□□ -0.92
SMAD1-213ENST00000514778 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
SMAD1-213ENST00000514778 ATG3Q9NT62 314 aa9.29□□□□□ -0.92
SMAD1-213ENST00000514778 ZNF831Q5JPB2 1677 aa9.29□□□□□ -0.92
SMAD1-213ENST00000514778 BTAF1O14981 1849 aa9.28□□□□□ -0.92
SMAD1-213ENST00000514778 PALLDQ8WX93 1383 aa9.28□□□□□ -0.92
SMAD1-213ENST00000514778 RIOK3O14730 519 aaKnown RBP9.28□□□□□ -0.92
SMAD1-213ENST00000514778 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-213ENST00000514778 TXNRD1Q16881 649 aa9.28□□□□□ -0.92
SMAD1-213ENST00000514778 ZNF790Q6PG37 636 aa9.28□□□□□ -0.92
SMAD1-213ENST00000514778 ASAP1Q9ULH1 1129 aa9.28□□□□□ -0.92
SMAD1-213ENST00000514778 IL16Q14005 1332 aa9.28□□□□□ -0.92
SMAD1-213ENST00000514778 ITGB4P16144 1822 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 LOC102724428A0A0B4J2F2 783 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 BTBD11A6QL63 1104 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 SIK1P57059 783 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 EZH2Q15910 746 aaKnown RBP9.27□□□□□ -0.93
SMAD1-213ENST00000514778 NBPF14Q5TI25 921 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 DEFB132Q7Z7B7 95 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 WDR63Q8IWG1 891 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 TTC5Q8N0Z6 440 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
SMAD1-213ENST00000514778 PCDH10Q9P2E7 1040 aa9.27□□□□□ -0.93
SMAD1-213ENST00000514778 LY75O60449 1722 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 IFT57Q9NWB7 429 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 CCNL1Q9UK58 526 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-213ENST00000514778 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
SMAD1-213ENST00000514778 SIPA1L3O60292 1781 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-213ENST00000514778 PAPPAQ13219 1627 aa9.26□□□□□ -0.93
SMAD1-213ENST00000514778 CICQ96RK0 1608 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-213ENST00000514778 CHL1O00533 1208 aa9.25□□□□□ -0.93
SMAD1-213ENST00000514778 ZNF853P0CG23 659 aa9.25□□□□□ -0.93
SMAD1-213ENST00000514778 GNAI1P63096 354 aa9.25□□□□□ -0.93
SMAD1-213ENST00000514778 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
SMAD1-213ENST00000514778 RNF25Q96BH1 459 aaPredicted RBP9.25□□□□□ -0.93
SMAD1-213ENST00000514778 FMNL2Q96PY5 1086 aa9.25□□□□□ -0.93
SMAD1-213ENST00000514778 CHMP4AQ9BY43 222 aa9.25□□□□□ -0.93
SMAD1-213ENST00000514778 RREB1Q92766 1687 aa9.25□□□□□ -0.93
SMAD1-213ENST00000514778 SOS1Q07889 1333 aaPredicted RBP9.25□□□□□ -0.93
SMAD1-213ENST00000514778 SNPHO15079 494 aa9.24□□□□□ -0.93
SMAD1-213ENST00000514778 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
SMAD1-213ENST00000514778 LRRC4BQ9NT99 713 aa9.24□□□□□ -0.93
SMAD1-213ENST00000514778 DLG5Q8TDM6 1919 aa9.24□□□□□ -0.93
SMAD1-213ENST00000514778 KCPQ6ZWJ8 1503 aa9.24□□□□□ -0.93
SMAD1-213ENST00000514778 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
SMAD1-213ENST00000514778 UBR2Q8IWV8 1755 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
SMAD1-213ENST00000514778 STARD3NLO95772 234 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 HOXB7P09629 217 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
SMAD1-213ENST00000514778 FLAD1Q8NFF5 587 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 ZNF496Q96IT1 587 aaPredicted RBP9.23□□□□□ -0.93
SMAD1-213ENST00000514778 STK32BQ9NY57 414 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 TSPYL4Q9UJ04 414 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 ZNF521Q96K83 1311 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 CNTNAP4Q9C0A0 1308 aa9.23□□□□□ -0.93
SMAD1-213ENST00000514778 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
SMAD1-213ENST00000514778 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
SMAD1-213ENST00000514778 SLC15A2Q16348 729 aa9.22□□□□□ -0.93
SMAD1-213ENST00000514778 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
SMAD1-213ENST00000514778 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms