RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 NFIXQ14938 502 aa18■□□□□ 0.47
SMAD5-209ENST00000514777 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
SMAD5-209ENST00000514777 BCL2L12Q9HB09 334 aa18■□□□□ 0.47
SMAD5-209ENST00000514777 ZC3H4Q9UPT8 1303 aaKnown RBP17.99■□□□□ 0.47
SMAD5-209ENST00000514777 POTECB2RU33 542 aa17.99■□□□□ 0.47
SMAD5-209ENST00000514777 ZPR1O75312 459 aa17.99■□□□□ 0.47
SMAD5-209ENST00000514777 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
SMAD5-209ENST00000514777 VEGFAP15692 232 aaPredicted RBP17.99■□□□□ 0.47
SMAD5-209ENST00000514777 SULT6B1Q6IMI4 303 aa17.99■□□□□ 0.47
SMAD5-209ENST00000514777 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
SMAD5-209ENST00000514777 LMNB1P20700 586 aa17.98■□□□□ 0.47
SMAD5-209ENST00000514777 PANK3Q9H999 370 aa17.98■□□□□ 0.47
SMAD5-209ENST00000514777 NARFQ9UHQ1 456 aa17.98■□□□□ 0.47
SMAD5-209ENST00000514777 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
SMAD5-209ENST00000514777 HSPA1AP0DMV8 641 aaKnown RBP17.97■□□□□ 0.47
SMAD5-209ENST00000514777 HSPA1BP0DMV9 641 aaKnown RBP17.97■□□□□ 0.47
SMAD5-209ENST00000514777 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
SMAD5-209ENST00000514777 SERPINB2P05120 415 aa17.96■□□□□ 0.47
SMAD5-209ENST00000514777 IL13P35225 146 aa17.96■□□□□ 0.47
SMAD5-209ENST00000514777 SLC39A6Q13433 755 aa17.96■□□□□ 0.47
SMAD5-209ENST00000514777 SLC52A2Q9HAB3 445 aa17.96■□□□□ 0.47
SMAD5-209ENST00000514777 NFKBIEO00221 500 aa17.95■□□□□ 0.46
SMAD5-209ENST00000514777 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
SMAD5-209ENST00000514777 TTLL6Q8N841 843 aa17.95■□□□□ 0.46
SMAD5-209ENST00000514777 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
SMAD5-209ENST00000514777 ANKRD31Q8N7Z5 1873 aa17.95■□□□□ 0.46
SMAD5-209ENST00000514777 COL15A1P39059 1388 aa17.93■□□□□ 0.46
SMAD5-209ENST00000514777 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
SMAD5-209ENST00000514777 FER1L6Q2WGJ9 1857 aa17.93■□□□□ 0.46
SMAD5-209ENST00000514777 RNMTO43148 476 aaKnown RBP17.93■□□□□ 0.46
SMAD5-209ENST00000514777 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
SMAD5-209ENST00000514777 C2CD5Q86YS7 1000 aa17.93■□□□□ 0.46
SMAD5-209ENST00000514777 MRC1P22897 1456 aa17.92■□□□□ 0.46
SMAD5-209ENST00000514777 UBR2Q8IWV8 1755 aa17.9■□□□□ 0.46
SMAD5-209ENST00000514777 H0YIN7 160 aa17.9■□□□□ 0.46
SMAD5-209ENST00000514777 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
SMAD5-209ENST00000514777 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
SMAD5-209ENST00000514777 EIF5P55010 431 aaKnown RBP17.88■□□□□ 0.45
SMAD5-209ENST00000514777 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
SMAD5-209ENST00000514777 VSIG10Q8N0Z9 540 aa17.88■□□□□ 0.45
SMAD5-209ENST00000514777 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
SMAD5-209ENST00000514777 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
SMAD5-209ENST00000514777 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
SMAD5-209ENST00000514777 MTHFSDQ2M296 383 aaKnown RBP17.87■□□□□ 0.45
SMAD5-209ENST00000514777 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
SMAD5-209ENST00000514777 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
SMAD5-209ENST00000514777 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
SMAD5-209ENST00000514777 C21orf2O43822 256 aa17.86■□□□□ 0.45
SMAD5-209ENST00000514777 HMOX1P09601 288 aa17.86■□□□□ 0.45
SMAD5-209ENST00000514777 POTEIP0CG38 1075 aa17.86■□□□□ 0.45
SMAD5-209ENST00000514777 POTEJP0CG39 1038 aa17.86■□□□□ 0.45
SMAD5-209ENST00000514777 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
SMAD5-209ENST00000514777 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.455e-6■□□□□ 10.2
SMAD5-209ENST00000514777 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
SMAD5-209ENST00000514777 ERFEQ4G0M1 354 aa17.84■□□□□ 0.45
SMAD5-209ENST00000514777 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
SMAD5-209ENST00000514777 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
SMAD5-209ENST00000514777 CREBZFQ9NS37 354 aa17.84■□□□□ 0.45
SMAD5-209ENST00000514777 DDNO94850 711 aaPredicted RBP17.83■□□□□ 0.44
SMAD5-209ENST00000514777 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
SMAD5-209ENST00000514777 CHADLQ6NUI6 762 aa17.83■□□□□ 0.44
SMAD5-209ENST00000514777 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.44
SMAD5-209ENST00000514777 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
SMAD5-209ENST00000514777 PDE6BP35913 854 aa17.82■□□□□ 0.44
SMAD5-209ENST00000514777 AMER1Q5JTC6 1135 aaPredicted RBP17.82■□□□□ 0.44
SMAD5-209ENST00000514777 TBC1D2BQ9UPU7 963 aa17.82■□□□□ 0.44
SMAD5-209ENST00000514777 SCN7AQ01118 1682 aa17.82■□□□□ 0.44
SMAD5-209ENST00000514777 STARD3NLO95772 234 aa17.81■□□□□ 0.44
SMAD5-209ENST00000514777 ZNF496Q96IT1 587 aaPredicted RBP17.81■□□□□ 0.44
SMAD5-209ENST00000514777 PDZRN3Q9UPQ7 1066 aa17.81■□□□□ 0.44
SMAD5-209ENST00000514777 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
SMAD5-209ENST00000514777 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
SMAD5-209ENST00000514777 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
SMAD5-209ENST00000514777 A0A087WZG4 1122 aa17.8■□□□□ 0.44
SMAD5-209ENST00000514777 FOXN1O15353 648 aa17.8■□□□□ 0.44
SMAD5-209ENST00000514777 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
SMAD5-209ENST00000514777 SCN4AP35499 1836 aa17.79■□□□□ 0.44
SMAD5-209ENST00000514777 PASKQ96RG2 1323 aa17.78■□□□□ 0.44
SMAD5-209ENST00000514777 SRGNP10124 158 aa17.78■□□□□ 0.44
SMAD5-209ENST00000514777 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
SMAD5-209ENST00000514777 CNTNAP1P78357 1384 aa17.78■□□□□ 0.44
SMAD5-209ENST00000514777 HEG1Q9ULI3 1381 aa17.78■□□□□ 0.44
SMAD5-209ENST00000514777 CAMTA2O94983 1202 aa17.77■□□□□ 0.44
SMAD5-209ENST00000514777 A1BGP04217 495 aa17.77■□□□□ 0.44
SMAD5-209ENST00000514777 IL6STP40189 918 aaPredicted RBP17.77■□□□□ 0.44
SMAD5-209ENST00000514777 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.44
SMAD5-209ENST00000514777 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
SMAD5-209ENST00000514777 ZNF790Q6PG37 636 aa17.77■□□□□ 0.44
SMAD5-209ENST00000514777 C7orf43Q8WVR3 580 aa17.77■□□□□ 0.44
SMAD5-209ENST00000514777 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
SMAD5-209ENST00000514777 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
SMAD5-209ENST00000514777 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
SMAD5-209ENST00000514777 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
SMAD5-209ENST00000514777 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
SMAD5-209ENST00000514777 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
SMAD5-209ENST00000514777 ITGBL1O95965 494 aaPredicted RBP17.75■□□□□ 0.43
SMAD5-209ENST00000514777 L3MBTL3Q96JM7 780 aaPredicted RBP17.75■□□□□ 0.43
SMAD5-209ENST00000514777 SETDB2Q96T68 719 aa17.75■□□□□ 0.43
SMAD5-209ENST00000514777 TEX13AQ9BXU3 409 aaPredicted RBP17.75■□□□□ 0.43
SMAD5-209ENST00000514777 TAF1DQ9H5J8 278 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms