RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 POTEFA5A3E0 1075 aa14.8□□□□□ -0.04
UBE2D3-232ENST00000514755 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
UBE2D3-232ENST00000514755 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-232ENST00000514755 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
UBE2D3-232ENST00000514755 SLC15A2Q16348 729 aa14.79□□□□□ -0.04
UBE2D3-232ENST00000514755 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
UBE2D3-232ENST00000514755 SEC24BO95487 1268 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 SLC27A3Q5K4L6 730 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 DCAF5Q96JK2 942 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 TMOD3Q9NYL9 352 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 CCNL1Q9UK58 526 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 ASAP1Q9ULH1 1129 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
UBE2D3-232ENST00000514755 HSP90AB1P08238 724 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-232ENST00000514755 AKAP4Q5JQC9 854 aa14.77□□□□□ -0.05
UBE2D3-232ENST00000514755 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.05
UBE2D3-232ENST00000514755 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.05
UBE2D3-232ENST00000514755 LGR6Q9HBX8 967 aa14.77□□□□□ -0.05
UBE2D3-232ENST00000514755 ATG3Q9NT62 314 aa14.77□□□□□ -0.05
UBE2D3-232ENST00000514755 SCN11AQ9UI33 1791 aa14.76□□□□□ -0.05
UBE2D3-232ENST00000514755 U2AF1L5P0DN76 240 aaPredicted RBP14.76□□□□□ -0.05
UBE2D3-232ENST00000514755 PRKAR2BP31323 418 aa14.76□□□□□ -0.05
UBE2D3-232ENST00000514755 U2AF1Q01081 240 aaKnown RBP eCLIP14.76□□□□□ -0.052e-12■□□□□ 11.1
UBE2D3-232ENST00000514755 RALBP1Q15311 655 aa14.76□□□□□ -0.05
UBE2D3-232ENST00000514755 SRCAPQ6ZRS2 3230 aa14.76□□□□□ -0.05
UBE2D3-232ENST00000514755 VIRMAQ69YN4 1812 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-232ENST00000514755 LRP5O75197 1615 aa14.75□□□□□ -0.05
UBE2D3-232ENST00000514755 ERVV-2B6SEH9 535 aa14.75□□□□□ -0.05
UBE2D3-232ENST00000514755 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
UBE2D3-232ENST00000514755 TUBGCP6Q96RT7 1819 aa14.75□□□□□ -0.05
UBE2D3-232ENST00000514755 TAF1LQ8IZX4 1826 aa14.74□□□□□ -0.05
UBE2D3-232ENST00000514755 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-232ENST00000514755 CABP4P57796 275 aa14.74□□□□□ -0.05
UBE2D3-232ENST00000514755 NFATC2IPQ8NCF5 419 aa14.74□□□□□ -0.05
UBE2D3-232ENST00000514755 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-232ENST00000514755 C5P01031 1676 aa14.74□□□□□ -0.05
UBE2D3-232ENST00000514755 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
UBE2D3-232ENST00000514755 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
UBE2D3-232ENST00000514755 SMARCC1Q92922 1105 aaPredicted RBP14.73□□□□□ -0.05
UBE2D3-232ENST00000514755 SLC4A9Q96Q91 983 aa14.73□□□□□ -0.05
UBE2D3-232ENST00000514755 ADAMTS7Q9UKP4 1686 aa14.73□□□□□ -0.05
UBE2D3-232ENST00000514755 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
UBE2D3-232ENST00000514755 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
UBE2D3-232ENST00000514755 ZBTB7AO95365 584 aa14.72□□□□□ -0.05
UBE2D3-232ENST00000514755 SIK1P57059 783 aa14.72□□□□□ -0.05
UBE2D3-232ENST00000514755 ITPK1Q13572 414 aa14.72□□□□□ -0.05
UBE2D3-232ENST00000514755 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
UBE2D3-232ENST00000514755 MYBBP1AQ9BQG0 1328 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-232ENST00000514755 SMIM5Q71RC9 77 aa14.71□□□□□ -0.05
UBE2D3-232ENST00000514755 AMIGO3Q86WK7 504 aa14.71□□□□□ -0.05
UBE2D3-232ENST00000514755 LINC00116Q8NCU8 138 aa14.71□□□□□ -0.05
UBE2D3-232ENST00000514755 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
UBE2D3-232ENST00000514755 MRC1P22897 1456 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 C4BP0C0L5 1744 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 QSER1Q2KHR3 1735 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 FCHSD2O94868 740 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 IL17REQ8NFR9 667 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 GAS2L2Q8NHY3 880 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 L3MBTL3Q96JM7 780 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 TFCP2L1Q9NZI6 479 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 MAP3K5Q99683 1374 aa14.7□□□□□ -0.06
UBE2D3-232ENST00000514755 SLC39A6Q13433 755 aa14.69□□□□□ -0.06
UBE2D3-232ENST00000514755 GNAT3A8MTJ3 354 aa14.68□□□□□ -0.06
UBE2D3-232ENST00000514755 PLEKHF1Q96S99 279 aa14.68□□□□□ -0.06
UBE2D3-232ENST00000514755 PTCD1O75127 700 aaKnown RBP14.67□□□□□ -0.06
UBE2D3-232ENST00000514755 PTGER2P43116 358 aa14.67□□□□□ -0.06
UBE2D3-232ENST00000514755 COL23A1Q86Y22 540 aaPredicted RBP14.67□□□□□ -0.06
UBE2D3-232ENST00000514755 SPON1Q9HCB6 807 aa14.67□□□□□ -0.06
UBE2D3-232ENST00000514755 DCTN1Q14203 1278 aa14.66□□□□□ -0.06
UBE2D3-232ENST00000514755 UBR3Q6ZT12 1888 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 SIPA1L3O60292 1781 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 CEMIPQ8WUJ3 1361 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 MCM10Q7L590 875 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 MTFR1LQ9H019 292 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 COL5A3P25940 1745 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 TJP1Q07157 1748 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 KCPQ6ZWJ8 1503 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
UBE2D3-232ENST00000514755 G3V3G9 751 aa14.64□□□□□ -0.07
UBE2D3-232ENST00000514755 PHF14O94880 888 aa14.64□□□□□ -0.07
UBE2D3-232ENST00000514755 AK7Q96M32 723 aa14.64□□□□□ -0.07
UBE2D3-232ENST00000514755 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
UBE2D3-232ENST00000514755 CCDC184Q52MB2 194 aa14.63□□□□□ -0.07
UBE2D3-232ENST00000514755 MYH14Q7Z406 1995 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-232ENST00000514755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.62□□□□□ -0.07
UBE2D3-232ENST00000514755 GNPATO15228 680 aa14.62□□□□□ -0.07
UBE2D3-232ENST00000514755 KCNQ3O43525 872 aa14.62□□□□□ -0.07
UBE2D3-232ENST00000514755 TEFQ10587 303 aa14.62□□□□□ -0.07
UBE2D3-232ENST00000514755 DNAJC10Q8IXB1 793 aa14.62□□□□□ -0.07
UBE2D3-232ENST00000514755 UBR2Q8IWV8 1755 aa14.62□□□□□ -0.07
UBE2D3-232ENST00000514755 COL24A1Q17RW2 1714 aa14.61□□□□□ -0.07
UBE2D3-232ENST00000514755 MSL1Q68DK7 614 aa14.61□□□□□ -0.07
UBE2D3-232ENST00000514755 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
UBE2D3-232ENST00000514755 CICQ96RK0 1608 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-232ENST00000514755 NFE2L2Q16236 605 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms