RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ZNF526Q8TF50 670 aaPredicted RBP17.87■□□□□ 0.45
PFDN1-206ENST00000514611 SIPA1L3O60292 1781 aaPredicted RBP17.86■□□□□ 0.45
PFDN1-206ENST00000514611 POLRMTO00411 1230 aaKnown RBP17.86■□□□□ 0.45
PFDN1-206ENST00000514611 ZPR1O75312 459 aa17.86■□□□□ 0.45
PFDN1-206ENST00000514611 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
PFDN1-206ENST00000514611 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
PFDN1-206ENST00000514611 KCNA3P22001 575 aa17.85■□□□□ 0.45
PFDN1-206ENST00000514611 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
PFDN1-206ENST00000514611 ZNF790Q6PG37 636 aa17.85■□□□□ 0.45
PFDN1-206ENST00000514611 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
PFDN1-206ENST00000514611 BRCA1P38398 1863 aaKnown RBP17.84■□□□□ 0.45
PFDN1-206ENST00000514611 FCHSD2O94868 740 aa17.84■□□□□ 0.45
PFDN1-206ENST00000514611 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
PFDN1-206ENST00000514611 TM4SF1P30408 202 aa17.84■□□□□ 0.45
PFDN1-206ENST00000514611 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
PFDN1-206ENST00000514611 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
PFDN1-206ENST00000514611 GPBP1L1Q9HC44 474 aaPredicted RBP17.84■□□□□ 0.45
PFDN1-206ENST00000514611 NARFQ9UHQ1 456 aa17.84■□□□□ 0.45
PFDN1-206ENST00000514611 NFIXQ14938 502 aa17.83■□□□□ 0.44
PFDN1-206ENST00000514611 NUDCQ9Y266 331 aa17.83■□□□□ 0.44
PFDN1-206ENST00000514611 KCNQ3O43525 872 aa17.82■□□□□ 0.44
PFDN1-206ENST00000514611 CHRNA5P30532 468 aa17.82■□□□□ 0.44
PFDN1-206ENST00000514611 STARD3NLO95772 234 aa17.81■□□□□ 0.44
PFDN1-206ENST00000514611 BTBD11A6QL63 1104 aa17.8■□□□□ 0.44
PFDN1-206ENST00000514611 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
PFDN1-206ENST00000514611 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
PFDN1-206ENST00000514611 MCM10Q7L590 875 aa17.8■□□□□ 0.44
PFDN1-206ENST00000514611 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
PFDN1-206ENST00000514611 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
PFDN1-206ENST00000514611 FMNL2Q96PY5 1086 aa17.79■□□□□ 0.44
PFDN1-206ENST00000514611 PIM2Q9P1W9 311 aa17.79■□□□□ 0.44
PFDN1-206ENST00000514611 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
PFDN1-206ENST00000514611 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
PFDN1-206ENST00000514611 DCTN1Q14203 1278 aa17.78■□□□□ 0.44
PFDN1-206ENST00000514611 DALRD3Q5D0E6 543 aaKnown RBP17.78■□□□□ 0.44
PFDN1-206ENST00000514611 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
PFDN1-206ENST00000514611 A1BGP04217 495 aa17.77■□□□□ 0.44
PFDN1-206ENST00000514611 SERPINB2P05120 415 aa17.77■□□□□ 0.44
PFDN1-206ENST00000514611 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
PFDN1-206ENST00000514611 ARFGEF1Q9Y6D6 1849 aa17.77■□□□□ 0.43
PFDN1-206ENST00000514611 PRAMEF22A3QJZ6 481 aa17.76■□□□□ 0.43
PFDN1-206ENST00000514611 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
PFDN1-206ENST00000514611 TEX13AQ9BXU3 409 aaPredicted RBP17.76■□□□□ 0.43
PFDN1-206ENST00000514611 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
PFDN1-206ENST00000514611 A0A087WZG4 1122 aa17.75■□□□□ 0.43
PFDN1-206ENST00000514611 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
PFDN1-206ENST00000514611 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
PFDN1-206ENST00000514611 TBC1D9BQ66K14 1250 aa17.75■□□□□ 0.43
PFDN1-206ENST00000514611 CEP350Q5VT06 3117 aa17.75■□□□□ 0.43
PFDN1-206ENST00000514611 KIF3CO14782 793 aa17.74■□□□□ 0.43
PFDN1-206ENST00000514611 C9orf131Q5VYM1 1079 aa17.73■□□□□ 0.43
PFDN1-206ENST00000514611 USP16Q9Y5T5 823 aa17.73■□□□□ 0.43
PFDN1-206ENST00000514611 CAMTA2O94983 1202 aa17.72■□□□□ 0.43
PFDN1-206ENST00000514611 BCORQ6W2J9 1755 aa17.71■□□□□ 0.43
PFDN1-206ENST00000514611 DLEC1Q9Y238 1755 aa17.71■□□□□ 0.43
PFDN1-206ENST00000514611 RASSF7Q02833 373 aa17.71■□□□□ 0.43
PFDN1-206ENST00000514611 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
PFDN1-206ENST00000514611 CCDC24Q8N4L8 307 aa17.71■□□□□ 0.43
PFDN1-206ENST00000514611 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
PFDN1-206ENST00000514611 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
PFDN1-206ENST00000514611 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
PFDN1-206ENST00000514611 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
PFDN1-206ENST00000514611 PRR5LQ6MZQ0 368 aa17.69■□□□□ 0.42
PFDN1-206ENST00000514611 NPM2Q86SE8 214 aaKnown RBP17.69■□□□□ 0.42
PFDN1-206ENST00000514611 DZIP3Q86Y13 1208 aaKnown RBP17.69■□□□□ 0.42
PFDN1-206ENST00000514611 NMRK2Q9NPI5 230 aa17.69■□□□□ 0.42
PFDN1-206ENST00000514611 MIS18AQ9NYP9 233 aa17.69■□□□□ 0.42
PFDN1-206ENST00000514611 COL11A2P13942 1736 aaPredicted RBP17.69■□□□□ 0.42
PFDN1-206ENST00000514611 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
PFDN1-206ENST00000514611 H0YIN7 160 aa17.67■□□□□ 0.42
PFDN1-206ENST00000514611 NEFMP07197 916 aa17.67■□□□□ 0.42
PFDN1-206ENST00000514611 TAF7Q15545 349 aaPredicted RBP17.67■□□□□ 0.42
PFDN1-206ENST00000514611 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
PFDN1-206ENST00000514611 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
PFDN1-206ENST00000514611 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
PFDN1-206ENST00000514611 HSPA6P17066 643 aa17.66■□□□□ 0.42
PFDN1-206ENST00000514611 PRELPP51888 382 aa17.66■□□□□ 0.42
PFDN1-206ENST00000514611 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
PFDN1-206ENST00000514611 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
PFDN1-206ENST00000514611 CNBD1Q8NA66 436 aa17.66■□□□□ 0.42
PFDN1-206ENST00000514611 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
PFDN1-206ENST00000514611 DLG5Q8TDM6 1919 aa17.65■□□□□ 0.42
PFDN1-206ENST00000514611 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
PFDN1-206ENST00000514611 BRIP1Q9BX63 1249 aa17.65■□□□□ 0.42
PFDN1-206ENST00000514611 LAMB4A4D0S4 1761 aa17.65■□□□□ 0.42
PFDN1-206ENST00000514611 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
PFDN1-206ENST00000514611 NPHP1O15259 732 aa17.64■□□□□ 0.41
PFDN1-206ENST00000514611 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.41
PFDN1-206ENST00000514611 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
PFDN1-206ENST00000514611 NFKBIEO00221 500 aa17.63■□□□□ 0.41
PFDN1-206ENST00000514611 PDE6BP35913 854 aa17.63■□□□□ 0.41
PFDN1-206ENST00000514611 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
PFDN1-206ENST00000514611 TOMM70O94826 608 aa17.62■□□□□ 0.41
PFDN1-206ENST00000514611 ST5P78524 1137 aa17.62■□□□□ 0.41
PFDN1-206ENST00000514611 SBF1O95248 1867 aa17.62■□□□□ 0.41
PFDN1-206ENST00000514611 LMNB1P20700 586 aa17.61■□□□□ 0.41
PFDN1-206ENST00000514611 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
PFDN1-206ENST00000514611 RALBP1Q15311 655 aa17.61■□□□□ 0.41
PFDN1-206ENST00000514611 ZNF652Q9Y2D9 606 aa17.61■□□□□ 0.41
PFDN1-206ENST00000514611 C21orf2O43822 256 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms