RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
SSBP2-218ENST00000514493 CLUAP1Q96AJ1 413 aa25.13■■□□□ 1.61
SSBP2-218ENST00000514493 PTPRCP08575 1304 aa25.13■■□□□ 1.61
SSBP2-218ENST00000514493 SNRPA1P09661 255 aaKnown RBP25.12■■□□□ 1.61
SSBP2-218ENST00000514493 PRIM1P49642 420 aaKnown RBP25.11■■□□□ 1.61
SSBP2-218ENST00000514493 API5Q9BZZ5 524 aaKnown RBP25.11■■□□□ 1.61
SSBP2-218ENST00000514493 SYTL4Q96C24 671 aaPredicted RBP25.1■■□□□ 1.61
SSBP2-218ENST00000514493 ABCC4O15439 1325 aa25.1■■□□□ 1.61
SSBP2-218ENST00000514493 ATG3Q9NT62 314 aa25.1■■□□□ 1.61
SSBP2-218ENST00000514493 CHPF2Q9P2E5 772 aa25.1■■□□□ 1.61
SSBP2-218ENST00000514493 COG6Q9Y2V7 657 aa25.1■■□□□ 1.61
SSBP2-218ENST00000514493 CICQ96RK0 1608 aaPredicted RBP25.1■■□□□ 1.61
SSBP2-218ENST00000514493 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
SSBP2-218ENST00000514493 BTAF1O14981 1849 aa25.09■■□□□ 1.61
SSBP2-218ENST00000514493 TJP1Q07157 1748 aa25.09■■□□□ 1.61
SSBP2-218ENST00000514493 G2E3Q7L622 706 aa25.08■■□□□ 1.61
SSBP2-218ENST00000514493 ACSBG1Q96GR2 724 aa25.08■■□□□ 1.61
SSBP2-218ENST00000514493 EP400Q96L91 3159 aa25.08■■□□□ 1.61
SSBP2-218ENST00000514493 FLIIQ13045 1269 aa25.08■■□□□ 1.6
SSBP2-218ENST00000514493 MVPQ14764 893 aaKnown RBP25.08■■□□□ 1.6
SSBP2-218ENST00000514493 DBF4Q9UBU7 674 aaPredicted RBP25.08■■□□□ 1.6
SSBP2-218ENST00000514493 KRT27Q7Z3Y8 459 aa25.06■■□□□ 1.6
SSBP2-218ENST00000514493 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
SSBP2-218ENST00000514493 TMEM57Q8N5G2 664 aa25.05■■□□□ 1.6
SSBP2-218ENST00000514493 ZNF831Q5JPB2 1677 aa25.05■■□□□ 1.6
SSBP2-218ENST00000514493 PXDNLA1KZ92 1463 aa25.04■■□□□ 1.6
SSBP2-218ENST00000514493 VSIG10Q8N0Z9 540 aa25.04■■□□□ 1.6
SSBP2-218ENST00000514493 USP16Q9Y5T5 823 aa25.04■■□□□ 1.6
SSBP2-218ENST00000514493 DDX21Q9NR30 783 aaKnown RBP eCLIP25.03■■□□□ 1.6
SSBP2-218ENST00000514493 ERBB4Q15303 1308 aa25.03■■□□□ 1.6
SSBP2-218ENST00000514493 ITPRIPQ8IWB1 547 aa25.03■■□□□ 1.6
SSBP2-218ENST00000514493 FKBP5Q13451 457 aaPredicted RBP25.02■■□□□ 1.6
SSBP2-218ENST00000514493 AAMPQ13685 434 aa25.02■■□□□ 1.6
SSBP2-218ENST00000514493 PDIA6Q15084 440 aa25.02■■□□□ 1.6
SSBP2-218ENST00000514493 PROSER3Q2NL68 480 aa25.02■■□□□ 1.6
SSBP2-218ENST00000514493 PHAXQ9H814 394 aaKnown RBP25.02■■□□□ 1.6
SSBP2-218ENST00000514493 HYPKQ9NX55 129 aa25.02■■□□□ 1.6
SSBP2-218ENST00000514493 DDX19BQ9UMR2 479 aa25.01■■□□□ 1.59
SSBP2-218ENST00000514493 KCNQ2O43526 872 aa25■■□□□ 1.59
SSBP2-218ENST00000514493 ANXA1P04083 346 aa25■■□□□ 1.59
SSBP2-218ENST00000514493 COL5A3P25940 1745 aaPredicted RBP24.99■■□□□ 1.59
SSBP2-218ENST00000514493 RBM42Q9BTD8 480 aaKnown RBP24.99■■□□□ 1.59
SSBP2-218ENST00000514493 PALLDQ8WX93 1383 aa24.98■■□□□ 1.59
SSBP2-218ENST00000514493 TEX13AQ9BXU3 409 aaPredicted RBP24.98■■□□□ 1.59
SSBP2-218ENST00000514493 INTS3Q68E01 1043 aaKnown RBP24.98■■□□□ 1.59
SSBP2-218ENST00000514493 LY75O60449 1722 aa24.97■■□□□ 1.59
SSBP2-218ENST00000514493 SMARCC1Q92922 1105 aaPredicted RBP24.97■■□□□ 1.59
SSBP2-218ENST00000514493 SLC4A9Q96Q91 983 aa24.97■■□□□ 1.59
SSBP2-218ENST00000514493 ARFGEF2Q9Y6D5 1785 aa24.97■■□□□ 1.59
SSBP2-218ENST00000514493 RREB1Q92766 1687 aa24.97■■□□□ 1.59
SSBP2-218ENST00000514493 LRP10Q7Z4F1 713 aa24.96■■□□□ 1.59
SSBP2-218ENST00000514493 F6X3S4 739 aa24.95■■□□□ 1.59
SSBP2-218ENST00000514493 DNAJC10Q8IXB1 793 aa24.95■■□□□ 1.59
SSBP2-218ENST00000514493 NUP188Q5SRE5 1749 aa24.95■■□□□ 1.59
SSBP2-218ENST00000514493 ADCY9O60503 1353 aa24.95■■□□□ 1.58
SSBP2-218ENST00000514493 MYL6BP14649 208 aa24.94■■□□□ 1.58
SSBP2-218ENST00000514493 CCT4P50991 539 aaKnown RBP24.93■■□□□ 1.58
SSBP2-218ENST00000514493 STARD3NLO95772 234 aa24.93■■□□□ 1.58
SSBP2-218ENST00000514493 CHMP4BQ9H444 224 aaKnown RBP24.93■■□□□ 1.58
SSBP2-218ENST00000514493 LOC102724428A0A0B4J2F2 783 aa24.92■■□□□ 1.58
SSBP2-218ENST00000514493 NBPF26B4DH59 902 aa24.92■■□□□ 1.58
SSBP2-218ENST00000514493 PIP4K2AP48426 406 aaPredicted RBP24.92■■□□□ 1.58
SSBP2-218ENST00000514493 SIK1P57059 783 aa24.92■■□□□ 1.58
SSBP2-218ENST00000514493 NBPF14Q5TI25 921 aa24.92■■□□□ 1.58
SSBP2-218ENST00000514493 NBPF10Q6P3W6 841 aaKnown RBP24.92■■□□□ 1.58
SSBP2-218ENST00000514493 NBPF15Q8N660 670 aa24.92■■□□□ 1.58
SSBP2-218ENST00000514493 ATP10DQ9P241 1426 aa24.92■■□□□ 1.58
SSBP2-218ENST00000514493 PI4KAP2A4QPH2 592 aa24.91■■□□□ 1.58
SSBP2-218ENST00000514493 SLC4A10Q6U841 1118 aa24.91■■□□□ 1.58
SSBP2-218ENST00000514493 PTF1AQ7RTS3 328 aa24.91■■□□□ 1.58
SSBP2-218ENST00000514493 MYH14Q7Z406 1995 aaKnown RBP24.91■■□□□ 1.58
SSBP2-218ENST00000514493 PI4KAP1Q8N8J0 262 aa24.91■■□□□ 1.58
SSBP2-218ENST00000514493 KDM2BQ8NHM5 1336 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 DDX58O95786 925 aaKnown RBP24.9■■□□□ 1.58
SSBP2-218ENST00000514493 A1BGP04217 495 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 FAM196AQ6ZSG2 479 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 XAGE3Q8WTP9 111 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 DNAAF4Q8WXU2 420 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 ZBTB40Q9NUA8 1239 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 TAF1LQ8IZX4 1826 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 ZBTB7BO15156 539 aaPredicted RBP24.9■■□□□ 1.58
SSBP2-218ENST00000514493 KSR2Q6VAB6 950 aa24.9■■□□□ 1.58
SSBP2-218ENST00000514493 AFDNP55196 1824 aaKnown RBP24.89■■□□□ 1.58
SSBP2-218ENST00000514493 CYP19A1P11511 503 aaPredicted RBP24.89■■□□□ 1.57
SSBP2-218ENST00000514493 AIMP1Q12904 312 aaKnown RBP24.88■■□□□ 1.57
SSBP2-218ENST00000514493 CENPQQ7L2Z9 268 aaPredicted RBP24.88■■□□□ 1.57
SSBP2-218ENST00000514493 ATP6V1AP38606 617 aa24.88■■□□□ 1.57
SSBP2-218ENST00000514493 COPS6Q7L5N1 327 aa24.88■■□□□ 1.57
SSBP2-218ENST00000514493 UPF1Q92900 1129 aaKnown RBP eCLIP24.88■■□□□ 1.57
SSBP2-218ENST00000514493 TRIM37O94972 964 aa24.87■■□□□ 1.57
SSBP2-218ENST00000514493 BCL11BQ9C0K0 894 aaPredicted RBP24.87■■□□□ 1.57
SSBP2-218ENST00000514493 MAP3K2Q9Y2U5 619 aa24.86■■□□□ 1.57
SSBP2-218ENST00000514493 ITPK1Q13572 414 aa24.85■■□□□ 1.57
SSBP2-218ENST00000514493 BEND3Q5T5X7 828 aa24.84■■□□□ 1.57
SSBP2-218ENST00000514493 SRCIN1Q9C0H9 1055 aa24.84■■□□□ 1.57
SSBP2-218ENST00000514493 PCDHB15Q9Y5E8 787 aa24.84■■□□□ 1.57
SSBP2-218ENST00000514493 ZBTB1Q9Y2K1 713 aa24.83■■□□□ 1.57
SSBP2-218ENST00000514493 RIC3Q7Z5B4 369 aa24.82■■□□□ 1.56
SSBP2-218ENST00000514493 ANKRD36CQ5JPF3 1778 aa24.82■■□□□ 1.56
SSBP2-218ENST00000514493 ANKRD13DQ6ZTN6 518 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms