RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 USP26Q9BXU7 913 aa10.1□□□□□ -0.79
CPNE4-211ENST00000514439 MEGF6O75095 1541 aa10.1□□□□□ -0.79
CPNE4-211ENST00000514439 KDM6AO15550 1401 aaPredicted RBP10.1□□□□□ -0.79
CPNE4-211ENST00000514439 COL18A1P39060 1754 aa10.1□□□□□ -0.79
CPNE4-211ENST00000514439 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
CPNE4-211ENST00000514439 TATP17735 454 aaPredicted RBP10.1□□□□□ -0.79
CPNE4-211ENST00000514439 MX1P20591 662 aa10.1□□□□□ -0.79
CPNE4-211ENST00000514439 POLA2Q14181 598 aa10.1□□□□□ -0.79
CPNE4-211ENST00000514439 PPP1R42Q7Z4L9 355 aa10.1□□□□□ -0.79
CPNE4-211ENST00000514439 CSB-PGBD3P0DP91 1061 aa10.09□□□□□ -0.79
CPNE4-211ENST00000514439 DDIT3P35638 169 aa10.09□□□□□ -0.79
CPNE4-211ENST00000514439 CHRNA2Q15822 529 aa10.09□□□□□ -0.79
CPNE4-211ENST00000514439 SPATA31A3Q5VYP0 1347 aa10.09□□□□□ -0.79
CPNE4-211ENST00000514439 ABCC6O95255 1503 aa10.09□□□□□ -0.79
CPNE4-211ENST00000514439 PHKG2P15735 406 aa10.08□□□□□ -0.8
CPNE4-211ENST00000514439 K7ELQ4 463 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-211ENST00000514439 SRGAP3O43295 1099 aa10.08□□□□□ -0.8
CPNE4-211ENST00000514439 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
CPNE4-211ENST00000514439 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
CPNE4-211ENST00000514439 MAP3K2Q9Y2U5 619 aa10.08□□□□□ -0.8
CPNE4-211ENST00000514439 CRYBG1Q9Y4K1 1723 aa10.08□□□□□ -0.8
CPNE4-211ENST00000514439 ERC2O15083 957 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 SURF6O75683 361 aaKnown RBP10.07□□□□□ -0.8
CPNE4-211ENST00000514439 REC8O95072 547 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 SLC39A6Q13433 755 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 RABEP1Q15276 862 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 ZNF790Q6PG37 636 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 IL1RAPL2Q9NP60 686 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
CPNE4-211ENST00000514439 STAP2Q9UGK3 403 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 CPDO75976 1380 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 KSR2Q6VAB6 950 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 BRINP3Q76B58 766 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 HYPKQ9NX55 129 aa10.07□□□□□ -0.8
CPNE4-211ENST00000514439 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 AOX1Q06278 1338 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 IFNL2Q8IZJ0 200 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 RHPN1Q8TCX5 695 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 DDX21Q9NR30 783 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE4-211ENST00000514439 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 HSP90AA1P07900 732 aaKnown RBP10.06□□□□□ -0.8
CPNE4-211ENST00000514439 MCM4P33991 863 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 PDIA6Q15084 440 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-211ENST00000514439 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
CPNE4-211ENST00000514439 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
CPNE4-211ENST00000514439 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 CYP27B1O15528 508 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 MTX1Q13505 466 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
CPNE4-211ENST00000514439 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-211ENST00000514439 MRC1P22897 1456 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 DDX58O95786 925 aaKnown RBP10.05□□□□□ -0.8
CPNE4-211ENST00000514439 AIMP1Q12904 312 aaKnown RBP10.05□□□□□ -0.8
CPNE4-211ENST00000514439 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 RILPL2Q969X0 211 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 DCAF5Q96JK2 942 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 FOXD4L1Q9NU39 408 aa10.05□□□□□ -0.8
CPNE4-211ENST00000514439 C5P01031 1676 aa10.04□□□□□ -0.8
CPNE4-211ENST00000514439 CHMLP26374 656 aa10.04□□□□□ -0.8
CPNE4-211ENST00000514439 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
CPNE4-211ENST00000514439 ZNF496Q96IT1 587 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-211ENST00000514439 PKD1L3Q7Z443 1732 aa10.04□□□□□ -0.8
CPNE4-211ENST00000514439 HSP90AB4PQ58FF6 505 aa10.04□□□□□ -0.8
CPNE4-211ENST00000514439 PI4K2BQ8TCG2 481 aa10.03□□□□□ -0.8
CPNE4-211ENST00000514439 GRM8O00222 908 aa10.02□□□□□ -0.8
CPNE4-211ENST00000514439 MYL6BP14649 208 aa10.02□□□□□ -0.8
CPNE4-211ENST00000514439 OS9Q13438 667 aaPredicted RBP10.02□□□□□ -0.8
CPNE4-211ENST00000514439 RAB3GAP1Q15042 981 aa10.02□□□□□ -0.8
CPNE4-211ENST00000514439 TTC5Q8N0Z6 440 aa10.02□□□□□ -0.8
CPNE4-211ENST00000514439 TNPO1Q92973 898 aaKnown RBP10.02□□□□□ -0.8
CPNE4-211ENST00000514439 PRDM11Q9NQV5 511 aa10.02□□□□□ -0.8
CPNE4-211ENST00000514439 UTYO14607 1347 aa10.02□□□□□ -0.81
CPNE4-211ENST00000514439 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
CPNE4-211ENST00000514439 XAGE3Q8WTP9 111 aa10.02□□□□□ -0.81
CPNE4-211ENST00000514439 SUCLG2Q96I99 432 aa10.02□□□□□ -0.81
CPNE4-211ENST00000514439 HDAC5Q9UQL6 1122 aa10.02□□□□□ -0.81
CPNE4-211ENST00000514439 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-211ENST00000514439 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-211ENST00000514439 ST18O60284 1047 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 SNRPA1P09661 255 aaKnown RBP10.01□□□□□ -0.81
CPNE4-211ENST00000514439 PA2G4Q9UQ80 394 aaKnown RBP10.01□□□□□ -0.81
CPNE4-211ENST00000514439 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 STRCQ7RTU9 1775 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 MAP4K4O95819 1239 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-211ENST00000514439 CABP4P57796 275 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 LARP1Q6PKG0 1096 aaKnown RBP10.01□□□□□ -0.81
CPNE4-211ENST00000514439 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 KAZALD1Q96I82 304 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 FMNL2Q96PY5 1086 aa10.01□□□□□ -0.81
CPNE4-211ENST00000514439 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms