RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 DSC3Q14574 896 aa7.83□□□□□ -1.16
CALCOCO2-222ENST00000514006 TLR1Q15399 786 aa7.83□□□□□ -1.16
CALCOCO2-222ENST00000514006 XAGE2Q96GT9 111 aa7.83□□□□□ -1.16
CALCOCO2-222ENST00000514006 MYO19Q96H55 970 aa7.83□□□□□ -1.16
CALCOCO2-222ENST00000514006 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
CALCOCO2-222ENST00000514006 CDK2AP1O14519 115 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 SIAH2O43255 324 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 PRPF40AO75400 957 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 IL2RAP01589 272 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 BRD2P25440 801 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 SREK1Q8WXA9 508 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 FAM129BQ96TA1 746 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 MRS2Q9HD23 443 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 LRFN2Q9ULH4 789 aa7.82□□□□□ -1.16
CALCOCO2-222ENST00000514006 SCAMP3O14828 347 aaKnown RBP7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 ERCC5P28715 1186 aaPredicted RBP7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 PPP1R18Q6NYC8 613 aa7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 CNKSR1Q969H4 720 aa7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 NGLY1Q96IV0 654 aa7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 DRC1Q96MC2 740 aa7.81□□□□□ -1.16
CALCOCO2-222ENST00000514006 SERTM1A2A2V5 107 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 GPR182O15218 404 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 NR3C2P08235 984 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 ALKBH8Q96BT7 664 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 DUSP9Q99956 384 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 ESYT1Q9BSJ8 1104 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 ZNF232Q9UNY5 417 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 IQSEC3Q9UPP2 1182 aaPredicted RBP7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
CALCOCO2-222ENST00000514006 ADH1AP07327 375 aa7.79□□□□□ -1.16
CALCOCO2-222ENST00000514006 HIRAP54198 1017 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-222ENST00000514006 TEAD4Q15561 434 aa7.79□□□□□ -1.16
CALCOCO2-222ENST00000514006 NAALADL2Q58DX5 795 aa7.79□□□□□ -1.16
CALCOCO2-222ENST00000514006 POTEAQ6S8J7 498 aa7.79□□□□□ -1.16
CALCOCO2-222ENST00000514006 ATCAYQ86WG3 371 aa7.79□□□□□ -1.16
CALCOCO2-222ENST00000514006 EML1O00423 815 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 WNT7AO00755 349 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 ZBTB39O15060 712 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 IGHA2P01877 340 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 NOS2P35228 1153 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 USP5P45974 858 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 HDLBPQ00341 1268 aaKnown RBP7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 CLN3Q13286 438 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 ALDH16A1Q8IZ83 802 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 FAM161BQ96MY7 647 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 CABP1Q9NZU7 370 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 HCSTQ9UBK5 93 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 POLIQ9UNA4 740 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 HRH3Q9Y5N1 445 aa7.78□□□□□ -1.16
CALCOCO2-222ENST00000514006 SORBS3O60504 671 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 MZF1P28698 734 aaPredicted RBP7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 PSMD2Q13200 908 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 DGKZQ13574 1117 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 RTN1Q16799 776 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 FAM26DQ5JW98 314 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 TMC4Q7Z404 712 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 MRGPRX2Q96LB1 330 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 NIF3L1Q9GZT8 377 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 VTI1BQ9UEU0 232 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 HCN4Q9Y3Q4 1203 aa7.77□□□□□ -1.17
CALCOCO2-222ENST00000514006 DAB2P98082 770 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 CENPCQ03188 943 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 SF3A1Q15459 793 aaKnown RBP7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 SH3PXD2AQ5TCZ1 1133 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 ALG1LQ6GMV1 187 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 GJD3Q8N144 294 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 EDEM1Q92611 657 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 L3MBTL2Q969R5 705 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 WWC3Q9ULE0 1092 aa7.76□□□□□ -1.17
CALCOCO2-222ENST00000514006 PNMA6FA0A0J9YX94 578 aa7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 ZAP70P43403 619 aa7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 ENOX2Q16206 610 aaKnown RBP7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 C9orf131Q5VYM1 1079 aa7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 ETFBKMTQ8IXQ9 262 aa7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 NLRP3Q96P20 1036 aa7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 FHDC1Q9C0D6 1143 aaPredicted RBP7.75□□□□□ -1.17
CALCOCO2-222ENST00000514006 MEN1O00255 615 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 ALDH1A1P00352 501 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 PDGFAP04085 211 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 PCSK2P16519 638 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 GTF2E1P29083 439 aaPredicted RBP7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 PTGIRP43119 386 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 NNTQ13423 1086 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 IFT43Q96FT9 208 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 SETDB2Q96T68 719 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 PHACTR1Q9C0D0 580 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 RNF19AQ9NV58 838 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 KLK14Q9P0G3 267 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 PARP3Q9Y6F1 533 aa7.74□□□□□ -1.17
CALCOCO2-222ENST00000514006 WASF2Q9Y6W5 498 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms