RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
TRIO-220ENST00000512979 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
TRIO-220ENST00000512979 LTN1O94822 1766 aa13.17□□□□□ -0.3
TRIO-220ENST00000512979 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
TRIO-220ENST00000512979 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
TRIO-220ENST00000512979 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
TRIO-220ENST00000512979 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
TRIO-220ENST00000512979 APBB1O00213 710 aa13.15□□□□□ -0.3
TRIO-220ENST00000512979 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
TRIO-220ENST00000512979 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
TRIO-220ENST00000512979 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
TRIO-220ENST00000512979 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
TRIO-220ENST00000512979 KCNQ2O43526 872 aa13.14□□□□□ -0.31
TRIO-220ENST00000512979 FBLN1P23142 703 aa13.14□□□□□ -0.31
TRIO-220ENST00000512979 AMPHP49418 695 aa13.14□□□□□ -0.31
TRIO-220ENST00000512979 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
TRIO-220ENST00000512979 C7P10643 843 aa13.13□□□□□ -0.31
TRIO-220ENST00000512979 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
TRIO-220ENST00000512979 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
TRIO-220ENST00000512979 PCGF6Q9BYE7 350 aa13.13□□□□□ -0.31
TRIO-220ENST00000512979 HOXC9P31274 260 aa13.12□□□□□ -0.31
TRIO-220ENST00000512979 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
TRIO-220ENST00000512979 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
TRIO-220ENST00000512979 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
TRIO-220ENST00000512979 SPON1Q9HCB6 807 aa13.12□□□□□ -0.31
TRIO-220ENST00000512979 FYB1O15117 783 aa13.11□□□□□ -0.31
TRIO-220ENST00000512979 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
TRIO-220ENST00000512979 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
TRIO-220ENST00000512979 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
TRIO-220ENST00000512979 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
TRIO-220ENST00000512979 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
TRIO-220ENST00000512979 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
TRIO-220ENST00000512979 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
TRIO-220ENST00000512979 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
TRIO-220ENST00000512979 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
TRIO-220ENST00000512979 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
TRIO-220ENST00000512979 A6NJR5 290 aa13.09□□□□□ -0.31
TRIO-220ENST00000512979 SKIV2LQ15477 1246 aaKnown RBP13.09□□□□□ -0.31
TRIO-220ENST00000512979 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
TRIO-220ENST00000512979 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
TRIO-220ENST00000512979 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
TRIO-220ENST00000512979 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
TRIO-220ENST00000512979 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
TRIO-220ENST00000512979 MCM6Q14566 821 aa13.07□□□□□ -0.32
TRIO-220ENST00000512979 SLC15A2Q16348 729 aa13.07□□□□□ -0.32
TRIO-220ENST00000512979 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
TRIO-220ENST00000512979 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
TRIO-220ENST00000512979 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
TRIO-220ENST00000512979 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
TRIO-220ENST00000512979 CARD14Q9BXL6 1004 aa13.06□□□□□ -0.32
TRIO-220ENST00000512979 FAM217BQ9NTX9 383 aaPredicted RBP13.06□□□□□ -0.32
TRIO-220ENST00000512979 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
TRIO-220ENST00000512979 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
TRIO-220ENST00000512979 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 KAT6BQ8WYB5 2073 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 MEGF6O75095 1541 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 TRAK2O60296 914 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 OATP04181 439 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
TRIO-220ENST00000512979 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
TRIO-220ENST00000512979 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
TRIO-220ENST00000512979 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
TRIO-220ENST00000512979 PADI6Q6TGC4 694 aa13.04□□□□□ -0.32
TRIO-220ENST00000512979 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
TRIO-220ENST00000512979 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
TRIO-220ENST00000512979 FLT4P35916 1363 aa13.04□□□□□ -0.32
TRIO-220ENST00000512979 BTAF1O14981 1849 aa13.04□□□□□ -0.32
TRIO-220ENST00000512979 RAPGEF4Q8WZA2 1011 aa13.03□□□□□ -0.32
TRIO-220ENST00000512979 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
TRIO-220ENST00000512979 POLR3EQ9NVU0 708 aa13.03□□□□□ -0.32
TRIO-220ENST00000512979 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
TRIO-220ENST00000512979 INSRP06213 1382 aa13.03□□□□□ -0.32
TRIO-220ENST00000512979 MYOM1P52179 1685 aa13.02□□□□□ -0.32
TRIO-220ENST00000512979 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
TRIO-220ENST00000512979 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.33
TRIO-220ENST00000512979 ADGRG1Q9Y653 693 aa13.02□□□□□ -0.33
TRIO-220ENST00000512979 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.33
TRIO-220ENST00000512979 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
TRIO-220ENST00000512979 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
TRIO-220ENST00000512979 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
TRIO-220ENST00000512979 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
TRIO-220ENST00000512979 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
TRIO-220ENST00000512979 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
TRIO-220ENST00000512979 PXYLP1Q8TE99 480 aa13.01□□□□□ -0.33
TRIO-220ENST00000512979 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
TRIO-220ENST00000512979 PAPPAQ13219 1627 aa13.01□□□□□ -0.33
TRIO-220ENST00000512979 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
TRIO-220ENST00000512979 FOSBP53539 338 aa13□□□□□ -0.33
TRIO-220ENST00000512979 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
TRIO-220ENST00000512979 NSD2O96028 1365 aa12.99□□□□□ -0.33
TRIO-220ENST00000512979 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIO-220ENST00000512979 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
TRIO-220ENST00000512979 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
TRIO-220ENST00000512979 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
TRIO-220ENST00000512979 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
TRIO-220ENST00000512979 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
TRIO-220ENST00000512979 KCNQ4P56696 695 aa12.98□□□□□ -0.33
TRIO-220ENST00000512979 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms