RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
KDM3B-208ENST00000512928 ZNF316A6NFI3 1004 aaPredicted RBP8.61□□□□□ -1.03
KDM3B-208ENST00000512928 ZPR1O75312 459 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 STARD3NLO95772 234 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 CYP19A1P11511 503 aaPredicted RBP8.61□□□□□ -1.03
KDM3B-208ENST00000512928 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
KDM3B-208ENST00000512928 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
KDM3B-208ENST00000512928 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 PNNQ9H307 717 aaKnown RBP8.61□□□□□ -1.03
KDM3B-208ENST00000512928 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
KDM3B-208ENST00000512928 GYS1P13807 737 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 WDR43Q15061 677 aaKnown RBP eCLIP8.6□□□□□ -1.03
KDM3B-208ENST00000512928 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
KDM3B-208ENST00000512928 VSIG10Q8N0Z9 540 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 ZBTB1Q9Y2K1 713 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 SIPA1L3O60292 1781 aaPredicted RBP8.6□□□□□ -1.03
KDM3B-208ENST00000512928 ADCY9O60503 1353 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 COL15A1P39059 1388 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 CEMIPQ8WUJ3 1361 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 HEG1Q9ULI3 1381 aa8.6□□□□□ -1.03
KDM3B-208ENST00000512928 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
KDM3B-208ENST00000512928 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
KDM3B-208ENST00000512928 KCNQ3O43525 872 aa8.59□□□□□ -1.03
KDM3B-208ENST00000512928 FKBP8Q14318 412 aa8.59□□□□□ -1.03
KDM3B-208ENST00000512928 NFE2L2Q16236 605 aa8.59□□□□□ -1.03
KDM3B-208ENST00000512928 USPL1Q5W0Q7 1092 aa8.59□□□□□ -1.03
KDM3B-208ENST00000512928 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
KDM3B-208ENST00000512928 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
KDM3B-208ENST00000512928 MYH14Q7Z406 1995 aaKnown RBP8.59□□□□□ -1.03
KDM3B-208ENST00000512928 HTATSF1O43719 755 aaKnown RBP8.58□□□□□ -1.04
KDM3B-208ENST00000512928 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
KDM3B-208ENST00000512928 PLEKHF1Q96S99 279 aa8.58□□□□□ -1.04
KDM3B-208ENST00000512928 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
KDM3B-208ENST00000512928 TEX13AQ9BXU3 409 aaPredicted RBP8.58□□□□□ -1.04
KDM3B-208ENST00000512928 A0A087WZG4 1122 aa8.57□□□□□ -1.04
KDM3B-208ENST00000512928 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
KDM3B-208ENST00000512928 A1BGP04217 495 aa8.57□□□□□ -1.04
KDM3B-208ENST00000512928 PIP4K2AP48426 406 aaPredicted RBP8.57□□□□□ -1.04
KDM3B-208ENST00000512928 TAF7Q15545 349 aaPredicted RBP8.57□□□□□ -1.04
KDM3B-208ENST00000512928 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
KDM3B-208ENST00000512928 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
KDM3B-208ENST00000512928 PRKRIP1Q9H875 184 aaPredicted RBP8.57□□□□□ -1.04
KDM3B-208ENST00000512928 RRP7AQ9Y3A4 280 aaKnown RBP8.57□□□□□ -1.04
KDM3B-208ENST00000512928 DLG5Q8TDM6 1919 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 C10orf71Q711Q0 1435 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
KDM3B-208ENST00000512928 A0A0G2JLW4 131 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 PRAMEF22A3QJZ6 481 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 NPHP1O15259 732 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
KDM3B-208ENST00000512928 RIPK4P57078 832 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 DDR1Q08345 913 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 KIF13BQ9NQT8 1826 aa8.56□□□□□ -1.04
KDM3B-208ENST00000512928 HTRA3P83110 453 aa8.55□□□□□ -1.04
KDM3B-208ENST00000512928 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
KDM3B-208ENST00000512928 GPBP1L1Q9HC44 474 aaPredicted RBP8.55□□□□□ -1.04
KDM3B-208ENST00000512928 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
KDM3B-208ENST00000512928 USP16Q9Y5T5 823 aa8.55□□□□□ -1.04
KDM3B-208ENST00000512928 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
KDM3B-208ENST00000512928 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
KDM3B-208ENST00000512928 KIF3CO14782 793 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 DPEP1P16444 411 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 IL6STP40189 918 aaPredicted RBP8.54□□□□□ -1.04
KDM3B-208ENST00000512928 TMPOP42166 694 aaKnown RBP8.54□□□□□ -1.04
KDM3B-208ENST00000512928 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
KDM3B-208ENST00000512928 TGFB2P61812 414 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 LMOD3Q0VAK6 560 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 NFIXQ14938 502 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
KDM3B-208ENST00000512928 NGEFQ8N5V2 710 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 ADAMTS8Q9UP79 889 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 LAS1LQ9Y4W2 734 aaKnown RBP8.54□□□□□ -1.04
KDM3B-208ENST00000512928 CEP350Q5VT06 3117 aa8.54□□□□□ -1.04
KDM3B-208ENST00000512928 SCN7AQ01118 1682 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 SERPINB2P05120 415 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 CHRNA5P30532 468 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 CACNB1Q02641 598 aaPredicted RBP8.53□□□□□ -1.04
KDM3B-208ENST00000512928 TBC1D9BQ66K14 1250 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 KDM3BQ7LBC6 1761 aa8.53□□□□□ -1.04
KDM3B-208ENST00000512928 ANP32CO43423 234 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 MYL6BP14649 208 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 HSPA6P17066 643 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 TM4SF1P30408 202 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 ARHGAP27Q6ZUM4 889 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 NMRK2Q9NPI5 230 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 PIM2Q9P1W9 311 aa8.52□□□□□ -1.05
KDM3B-208ENST00000512928 WDR90Q96KV7 1748 aa8.51□□□□□ -1.05
KDM3B-208ENST00000512928 CARMIL3Q8ND23 1372 aa8.51□□□□□ -1.05
KDM3B-208ENST00000512928 FAM177BA6PVY3 158 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms