RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 C1QTNF8P60827 252 aa22.5■■□□□ 1.19
MATR3-220ENST00000512876 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
MATR3-220ENST00000512876 A0A0G2JLW4 131 aa22.49■■□□□ 1.19
MATR3-220ENST00000512876 POLRMTO00411 1230 aaKnown RBP22.49■■□□□ 1.19
MATR3-220ENST00000512876 DPEP1P16444 411 aa22.49■■□□□ 1.19
MATR3-220ENST00000512876 USPL1Q5W0Q7 1092 aa22.49■■□□□ 1.19
MATR3-220ENST00000512876 NARFQ9UHQ1 456 aa22.49■■□□□ 1.19
MATR3-220ENST00000512876 ZPR1O75312 459 aa22.48■■□□□ 1.19
MATR3-220ENST00000512876 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
MATR3-220ENST00000512876 KCNA3P22001 575 aa22.48■■□□□ 1.19
MATR3-220ENST00000512876 FCHSD2O94868 740 aa22.47■■□□□ 1.19
MATR3-220ENST00000512876 U2AF1L5P0DN76 240 aaPredicted RBP22.47■■□□□ 1.19
MATR3-220ENST00000512876 U2AF1Q01081 240 aaKnown RBP eCLIP22.47■■□□□ 1.19
MATR3-220ENST00000512876 NRXN2Q9P2S2 1712 aa22.46■■□□□ 1.19
MATR3-220ENST00000512876 STARD3NLO95772 234 aa22.46■■□□□ 1.19
MATR3-220ENST00000512876 BCL2L12Q9HB09 334 aa22.46■■□□□ 1.19
MATR3-220ENST00000512876 EIF5P55010 431 aaKnown RBP22.45■■□□□ 1.18
MATR3-220ENST00000512876 BCS1LQ9Y276 419 aa22.45■■□□□ 1.18
MATR3-220ENST00000512876 NFIXQ14938 502 aa22.44■■□□□ 1.18
MATR3-220ENST00000512876 TEX13AQ9BXU3 409 aaPredicted RBP22.44■■□□□ 1.18
MATR3-220ENST00000512876 SCN7AQ01118 1682 aa22.43■■□□□ 1.18
MATR3-220ENST00000512876 CANXP27824 592 aaKnown RBP22.43■■□□□ 1.18
MATR3-220ENST00000512876 FMNL2Q96PY5 1086 aa22.43■■□□□ 1.18
MATR3-220ENST00000512876 ARFGEF1Q9Y6D6 1849 aa22.43■■□□□ 1.18
MATR3-220ENST00000512876 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
MATR3-220ENST00000512876 BTBD11A6QL63 1104 aa22.41■■□□□ 1.18
MATR3-220ENST00000512876 KCNQ3O43525 872 aa22.41■■□□□ 1.18
MATR3-220ENST00000512876 A0A087WZG4 1122 aa22.4■■□□□ 1.18
MATR3-220ENST00000512876 HTATSF1O43719 755 aaKnown RBP22.4■■□□□ 1.18
MATR3-220ENST00000512876 GPBP1L1Q9HC44 474 aaPredicted RBP22.4■■□□□ 1.18
MATR3-220ENST00000512876 PIM2Q9P1W9 311 aa22.4■■□□□ 1.18
MATR3-220ENST00000512876 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.17
MATR3-220ENST00000512876 MCM10Q7L590 875 aa22.39■■□□□ 1.17
MATR3-220ENST00000512876 CHRNA5P30532 468 aa22.38■■□□□ 1.17
MATR3-220ENST00000512876 RTF1Q92541 710 aaKnown RBP22.38■■□□□ 1.17
MATR3-220ENST00000512876 SERPINB2P05120 415 aa22.37■■□□□ 1.17
MATR3-220ENST00000512876 DALRD3Q5D0E6 543 aaKnown RBP22.37■■□□□ 1.17
MATR3-220ENST00000512876 CEP350Q5VT06 3117 aa22.37■■□□□ 1.17
MATR3-220ENST00000512876 CARMIL3Q8ND23 1372 aa22.36■■□□□ 1.17
MATR3-220ENST00000512876 DLEC1Q9Y238 1755 aa22.35■■□□□ 1.17
MATR3-220ENST00000512876 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
MATR3-220ENST00000512876 A1BGP04217 495 aa22.35■■□□□ 1.17
MATR3-220ENST00000512876 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
MATR3-220ENST00000512876 ARHGAP27Q6ZUM4 889 aa22.35■■□□□ 1.17
MATR3-220ENST00000512876 ZNF526Q8TF50 670 aaPredicted RBP22.34■■□□□ 1.17
MATR3-220ENST00000512876 PLEKHF1Q96S99 279 aa22.34■■□□□ 1.17
MATR3-220ENST00000512876 BCORQ6W2J9 1755 aa22.34■■□□□ 1.17
MATR3-220ENST00000512876 CAMTA2O94983 1202 aa22.33■■□□□ 1.17
MATR3-220ENST00000512876 TBC1D9BQ66K14 1250 aa22.33■■□□□ 1.17
MATR3-220ENST00000512876 TBC1D2BQ9UPU7 963 aa22.33■■□□□ 1.17
MATR3-220ENST00000512876 USP16Q9Y5T5 823 aa22.33■■□□□ 1.17
MATR3-220ENST00000512876 PRAMEF22A3QJZ6 481 aa22.32■■□□□ 1.16
MATR3-220ENST00000512876 SNRPA1P09661 255 aaKnown RBP22.32■■□□□ 1.16
MATR3-220ENST00000512876 BICDL1Q6ZP65 573 aa22.31■■□□□ 1.16
MATR3-220ENST00000512876 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
MATR3-220ENST00000512876 DLG5Q8TDM6 1919 aa22.31■■□□□ 1.16
MATR3-220ENST00000512876 KIF3CO14782 793 aa22.3■■□□□ 1.16
MATR3-220ENST00000512876 TAF7Q15545 349 aaPredicted RBP22.3■■□□□ 1.16
MATR3-220ENST00000512876 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
MATR3-220ENST00000512876 KDM3BQ7LBC6 1761 aa22.29■■□□□ 1.16
MATR3-220ENST00000512876 LAMB4A4D0S4 1761 aa22.28■■□□□ 1.16
MATR3-220ENST00000512876 NEFMP07197 916 aa22.28■■□□□ 1.16
MATR3-220ENST00000512876 RALBP1Q15311 655 aa22.28■■□□□ 1.16
MATR3-220ENST00000512876 NFE2L2Q16236 605 aa22.28■■□□□ 1.16
MATR3-220ENST00000512876 C9orf131Q5VYM1 1079 aa22.28■■□□□ 1.16
MATR3-220ENST00000512876 PRR5LQ6MZQ0 368 aa22.28■■□□□ 1.16
MATR3-220ENST00000512876 DZIP3Q86Y13 1208 aaKnown RBP22.28■■□□□ 1.16
MATR3-220ENST00000512876 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
MATR3-220ENST00000512876 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
MATR3-220ENST00000512876 COL11A2P13942 1736 aaPredicted RBP22.26■■□□□ 1.15
MATR3-220ENST00000512876 NBPF26B4DH59 902 aa22.26■■□□□ 1.15
MATR3-220ENST00000512876 NBPF10Q6P3W6 841 aaKnown RBP22.26■■□□□ 1.15
MATR3-220ENST00000512876 C2CD5Q86YS7 1000 aa22.26■■□□□ 1.15
MATR3-220ENST00000512876 NBPF15Q8N660 670 aa22.26■■□□□ 1.15
MATR3-220ENST00000512876 RGL2O15211 777 aa22.25■■□□□ 1.15
MATR3-220ENST00000512876 TTLL6Q8N841 843 aa22.25■■□□□ 1.15
MATR3-220ENST00000512876 BRIP1Q9BX63 1249 aa22.25■■□□□ 1.15
MATR3-220ENST00000512876 H0YIN7 160 aa22.24■■□□□ 1.15
MATR3-220ENST00000512876 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
MATR3-220ENST00000512876 PNISRQ8TF01 805 aaKnown RBP22.24■■□□□ 1.15
MATR3-220ENST00000512876 SETDB2Q96T68 719 aa22.24■■□□□ 1.15
MATR3-220ENST00000512876 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
MATR3-220ENST00000512876 PDZRN3Q9UPQ7 1066 aa22.24■■□□□ 1.15
MATR3-220ENST00000512876 SBF1O95248 1867 aa22.24■■□□□ 1.15
MATR3-220ENST00000512876 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
MATR3-220ENST00000512876 RNF181Q9P0P0 153 aa22.23■■□□□ 1.15
MATR3-220ENST00000512876 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
MATR3-220ENST00000512876 PDE6BP35913 854 aa22.22■■□□□ 1.15
MATR3-220ENST00000512876 CNBD1Q8NA66 436 aa22.22■■□□□ 1.15
MATR3-220ENST00000512876 THUMPD2Q9BTF0 503 aaKnown RBP22.22■■□□□ 1.15
MATR3-220ENST00000512876 EIF4A1P60842 406 aaKnown RBP22.21■■□□□ 1.15
MATR3-220ENST00000512876 RASSF7Q02833 373 aa22.21■■□□□ 1.15
MATR3-220ENST00000512876 ZC3H4Q9UPT8 1303 aaKnown RBP22.21■■□□□ 1.15
MATR3-220ENST00000512876 PRELPP51888 382 aa22.2■■□□□ 1.14
MATR3-220ENST00000512876 DDX10Q13206 875 aaKnown RBP22.2■■□□□ 1.14
MATR3-220ENST00000512876 CCDC24Q8N4L8 307 aa22.2■■□□□ 1.14
MATR3-220ENST00000512876 NMRK2Q9NPI5 230 aa22.2■■□□□ 1.14
MATR3-220ENST00000512876 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.14
MATR3-220ENST00000512876 HSPA6P17066 643 aa22.19■■□□□ 1.14
MATR3-220ENST00000512876 MYBBP1AQ9BQG0 1328 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms