RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
PROM1-213ENST00000512304 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
PROM1-213ENST00000512304 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
PROM1-213ENST00000512304 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
PROM1-213ENST00000512304 ABHD8Q96I13 439 aa12.81□□□□□ -0.36
PROM1-213ENST00000512304 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
PROM1-213ENST00000512304 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
PROM1-213ENST00000512304 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
PROM1-213ENST00000512304 ZBTB22O15209 634 aa12.8□□□□□ -0.36
PROM1-213ENST00000512304 NFIXQ14938 502 aa12.8□□□□□ -0.36
PROM1-213ENST00000512304 CNTNAP1P78357 1384 aa12.8□□□□□ -0.36
PROM1-213ENST00000512304 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
PROM1-213ENST00000512304 EIF4A2Q14240 407 aaKnown RBP12.79□□□□□ -0.36
PROM1-213ENST00000512304 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
PROM1-213ENST00000512304 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
PROM1-213ENST00000512304 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
PROM1-213ENST00000512304 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
PROM1-213ENST00000512304 CTCFP49711 727 aaPredicted RBP12.78□□□□□ -0.36
PROM1-213ENST00000512304 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
PROM1-213ENST00000512304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
PROM1-213ENST00000512304 ARFGEF1Q9Y6D6 1849 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 C21orf2O43822 256 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
PROM1-213ENST00000512304 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
PROM1-213ENST00000512304 CABP4P57796 275 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 TTLL6Q8N841 843 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 WBP1LQ9NX94 342 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
PROM1-213ENST00000512304 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
PROM1-213ENST00000512304 PASKQ96RG2 1323 aa12.76□□□□□ -0.37
PROM1-213ENST00000512304 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
PROM1-213ENST00000512304 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
PROM1-213ENST00000512304 SERPINB2P05120 415 aa12.75□□□□□ -0.37
PROM1-213ENST00000512304 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
PROM1-213ENST00000512304 ERFEQ4G0M1 354 aa12.75□□□□□ -0.37
PROM1-213ENST00000512304 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
PROM1-213ENST00000512304 BICDL1Q6ZP65 573 aa12.75□□□□□ -0.37
PROM1-213ENST00000512304 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
PROM1-213ENST00000512304 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
PROM1-213ENST00000512304 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
PROM1-213ENST00000512304 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
PROM1-213ENST00000512304 SBF1O95248 1867 aa12.74□□□□□ -0.37
PROM1-213ENST00000512304 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
PROM1-213ENST00000512304 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
PROM1-213ENST00000512304 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
PROM1-213ENST00000512304 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
PROM1-213ENST00000512304 ZPR1O75312 459 aa12.72□□□□□ -0.37
PROM1-213ENST00000512304 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
PROM1-213ENST00000512304 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
PROM1-213ENST00000512304 ADAMTS7Q9UKP4 1686 aa12.72□□□□□ -0.37
PROM1-213ENST00000512304 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.37
PROM1-213ENST00000512304 MTHFSP49914 203 aa12.71□□□□□ -0.37
PROM1-213ENST00000512304 MLLT1Q03111 559 aaPredicted RBP12.71□□□□□ -0.37
PROM1-213ENST00000512304 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.37
PROM1-213ENST00000512304 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
PROM1-213ENST00000512304 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
PROM1-213ENST00000512304 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.38
PROM1-213ENST00000512304 TMEM88BA6NKF7 163 aa12.7□□□□□ -0.38
PROM1-213ENST00000512304 H0YIN7 160 aa12.7□□□□□ -0.38
PROM1-213ENST00000512304 EAPPQ56P03 285 aaPredicted RBP12.7□□□□□ -0.38
PROM1-213ENST00000512304 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
PROM1-213ENST00000512304 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
PROM1-213ENST00000512304 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
PROM1-213ENST00000512304 ZNF541Q9H0D2 1346 aa12.69□□□□□ -0.38
PROM1-213ENST00000512304 TJP1Q07157 1748 aa12.69□□□□□ -0.38
PROM1-213ENST00000512304 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
PROM1-213ENST00000512304 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
PROM1-213ENST00000512304 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
PROM1-213ENST00000512304 CANXP27824 592 aaKnown RBP12.68□□□□□ -0.38
PROM1-213ENST00000512304 LDHDQ86WU2 507 aa12.68□□□□□ -0.38
PROM1-213ENST00000512304 COL15A1P39059 1388 aa12.68□□□□□ -0.38
PROM1-213ENST00000512304 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
PROM1-213ENST00000512304 RGS19P49795 217 aa12.67□□□□□ -0.38
PROM1-213ENST00000512304 GRM1Q13255 1194 aa12.67□□□□□ -0.38
PROM1-213ENST00000512304 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
PROM1-213ENST00000512304 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
PROM1-213ENST00000512304 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
PROM1-213ENST00000512304 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
PROM1-213ENST00000512304 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
PROM1-213ENST00000512304 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
PROM1-213ENST00000512304 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
PROM1-213ENST00000512304 DEFB115Q30KQ5 88 aa12.66□□□□□ -0.38
PROM1-213ENST00000512304 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
PROM1-213ENST00000512304 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
PROM1-213ENST00000512304 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
PROM1-213ENST00000512304 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
PROM1-213ENST00000512304 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
PROM1-213ENST00000512304 KIF20BQ96Q89 1820 aa12.65□□□□□ -0.39
PROM1-213ENST00000512304 AOC2O75106 756 aa12.64□□□□□ -0.39
PROM1-213ENST00000512304 C1orf141Q5JVX7 400 aa12.64□□□□□ -0.39
PROM1-213ENST00000512304 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
PROM1-213ENST00000512304 PRPF40BQ6NWY9 871 aaKnown RBP12.64□□□□□ -0.39
PROM1-213ENST00000512304 CNTROBQ8N137 903 aa12.64□□□□□ -0.39
PROM1-213ENST00000512304 L3MBTL3Q96JM7 780 aaPredicted RBP12.64□□□□□ -0.39
PROM1-213ENST00000512304 ABT1Q9ULW3 272 aaKnown RBP12.64□□□□□ -0.39
PROM1-213ENST00000512304 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
PROM1-213ENST00000512304 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms