RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 KIF1BO60333 1816 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 RRP12Q5JTH9 1297 aaKnown RBP15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 DCAF5Q96JK2 942 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 WDR33Q9C0J8 1336 aaKnown RBP15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 GRM8O00222 908 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 RAD21O60216 631 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 IL2RBP14784 551 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 IDH1O75874 414 aaKnown RBP15.62■□□□□ 0.09
PCDHA4-202ENST00000512229 IFIT1P09914 478 aaKnown RBP15.62■□□□□ 0.09
PCDHA4-202ENST00000512229 MCM4P33991 863 aa15.62■□□□□ 0.09
PCDHA4-202ENST00000512229 CAVIN1Q6NZI2 390 aaKnown RBP15.62■□□□□ 0.09
PCDHA4-202ENST00000512229 STK3Q13188 491 aa15.62■□□□□ 0.09
PCDHA4-202ENST00000512229 ZSCAN31Q96LW9 406 aaPredicted RBP15.62■□□□□ 0.09
PCDHA4-202ENST00000512229 FIBPO43427 364 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 CREBRFQ8IUR6 639 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 TOM1O60784 492 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 PDE1AP54750 535 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 CEP85Q6P2H3 762 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 MRE11P49959 708 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 SDSP20132 328 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 LARP1BQ659C4 914 aaKnown RBP15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 G2E3Q7L622 706 aa15.61■□□□□ 0.09
PCDHA4-202ENST00000512229 PRPF40BQ6NWY9 871 aaKnown RBP15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 ROBO2Q9HCK4 1378 aa15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 UNC13BO14795 1591 aa15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 PHAXQ9H814 394 aaKnown RBP15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 EVI5LQ96CN4 794 aa15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 LRP2BPQ9P2M1 347 aa15.6■□□□□ 0.09
PCDHA4-202ENST00000512229 XBP1P17861 261 aa15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 SASS6Q6UVJ0 657 aa15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 LDHAL6AQ6ZMR3 332 aa15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 SYNMO15061 1565 aa15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 VPS53Q5VIR6 699 aa15.59■□□□□ 0.09
PCDHA4-202ENST00000512229 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.09
PCDHA4-202ENST00000512229 DDX21Q9NR30 783 aaKnown RBP eCLIP15.58■□□□□ 0.09
PCDHA4-202ENST00000512229 ZPR1O75312 459 aa15.58■□□□□ 0.08
PCDHA4-202ENST00000512229 SLC3A2P08195 630 aaKnown RBP15.58■□□□□ 0.08
PCDHA4-202ENST00000512229 SDF4Q9BRK5 362 aa15.58■□□□□ 0.08
PCDHA4-202ENST00000512229 ABCF2Q9UG63 623 aa15.58■□□□□ 0.08
PCDHA4-202ENST00000512229 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.08
PCDHA4-202ENST00000512229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 HOXB7P09629 217 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 PLEKHF1Q96S99 279 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 CWF19L2Q2TBE0 894 aaKnown RBP15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 ZNF790Q6PG37 636 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 RAI14Q9P0K7 980 aa15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 HOOK1Q9UJC3 728 aaKnown RBP15.57■□□□□ 0.08
PCDHA4-202ENST00000512229 CLTCL1P53675 1640 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 TPD52L1Q16890 204 aaPredicted RBP15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 TRMT2AQ8IZ69 625 aaKnown RBP15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 RNF214Q8ND24 703 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 UBAP1LF5GYI3 381 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 LMBR1LQ6UX01 489 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 AIDAQ96BJ3 306 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 ZNF521Q96K83 1311 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 KDM4AO75164 1064 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 IMMTQ16891 758 aaKnown RBP15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
PCDHA4-202ENST00000512229 TDO2P48775 406 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 KRT85P78386 507 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 DDB1Q16531 1140 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 DDX17Q92841 729 aaKnown RBP15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 SLAIN2Q9P270 581 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 MTMR7Q9Y216 660 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 HMGB2P26583 209 aaKnown RBP15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 FAM135BQ49AJ0 1406 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 ARHGEF10O15013 1369 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 ATP7BP35670 1465 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 BRMS1Q9HCU9 246 aa15.55■□□□□ 0.08
PCDHA4-202ENST00000512229 CROCC2H7BZ55 1655 aa15.54■□□□□ 0.08
PCDHA4-202ENST00000512229 PDIA4P13667 645 aaKnown RBP15.54■□□□□ 0.08
PCDHA4-202ENST00000512229 ATP2B1P20020 1258 aa15.54■□□□□ 0.08
PCDHA4-202ENST00000512229 STK11IPQ8N1F8 1099 aa15.54■□□□□ 0.08
PCDHA4-202ENST00000512229 RNF17Q9BXT8 1623 aaKnown RBP15.54■□□□□ 0.08
PCDHA4-202ENST00000512229 MAP3K4Q9Y6R4 1608 aa15.54■□□□□ 0.08
PCDHA4-202ENST00000512229 CLSTN1O94985 981 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 CEBPZQ03701 1054 aaKnown RBP15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 KDM2BQ8NHM5 1336 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 GOLIM4O00461 696 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 PES1O00541 588 aaKnown RBP15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 PLEKHM2Q8IWE5 1019 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 TRIM22Q8IYM9 498 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms