RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 USP17L10C9JJH3 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L21D6R901 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 TNS4Q8IZW8 715 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
PDE4D-220ENST00000512069 DPYDQ12882 1025 aa9.21□□□□□ -0.94
PDE4D-220ENST00000512069 CDCA8Q53HL2 280 aa9.21□□□□□ -0.94
PDE4D-220ENST00000512069 TBCELQ5QJ74 424 aa9.21□□□□□ -0.94
PDE4D-220ENST00000512069 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
PDE4D-220ENST00000512069 ARXQ96QS3 562 aa9.21□□□□□ -0.94
PDE4D-220ENST00000512069 PARP3Q9Y6F1 533 aa9.21□□□□□ -0.94
PDE4D-220ENST00000512069 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
PDE4D-220ENST00000512069 CCDC82Q8N4S0 544 aa9.2□□□□□ -0.94
PDE4D-220ENST00000512069 CABP1Q9NZU7 370 aa9.2□□□□□ -0.94
PDE4D-220ENST00000512069 CSB-PGBD3P0DP91 1061 aa9.19□□□□□ -0.94
PDE4D-220ENST00000512069 TEAD4Q15561 434 aa9.19□□□□□ -0.94
PDE4D-220ENST00000512069 PGBD3Q8N328 593 aa9.19□□□□□ -0.94
PDE4D-220ENST00000512069 TSEN2Q8NCE0 465 aaKnown RBP9.19□□□□□ -0.94
PDE4D-220ENST00000512069 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
PDE4D-220ENST00000512069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-220ENST00000512069 ATG7O95352 703 aa9.18□□□□□ -0.94
PDE4D-220ENST00000512069 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
PDE4D-220ENST00000512069 GAS2L2Q8NHY3 880 aa9.18□□□□□ -0.94
PDE4D-220ENST00000512069 C1orf216Q8TAB5 229 aa9.18□□□□□ -0.94
PDE4D-220ENST00000512069 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
PDE4D-220ENST00000512069 PBXIP1Q96AQ6 731 aa9.18□□□□□ -0.94
PDE4D-220ENST00000512069 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
PDE4D-220ENST00000512069 NOS2P35228 1153 aa9.17□□□□□ -0.94
PDE4D-220ENST00000512069 TRERF1Q96PN7 1200 aa9.17□□□□□ -0.94
PDE4D-220ENST00000512069 FAM181BA6NEQ2 426 aa9.16□□□□□ -0.94
PDE4D-220ENST00000512069 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
PDE4D-220ENST00000512069 ATP4AP20648 1035 aa9.16□□□□□ -0.94
PDE4D-220ENST00000512069 UBAP2LQ14157 1087 aaKnown RBP9.16□□□□□ -0.94
PDE4D-220ENST00000512069 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
PDE4D-220ENST00000512069 TSPAN10Q9H1Z9 355 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-220ENST00000512069 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
PDE4D-220ENST00000512069 ATAD2Q6PL18 1390 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.94
PDE4D-220ENST00000512069 PPP1R15AO75807 674 aaPredicted RBP9.15□□□□□ -0.94
PDE4D-220ENST00000512069 PSMA6P60900 246 aaKnown RBP9.15□□□□□ -0.94
PDE4D-220ENST00000512069 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
PDE4D-220ENST00000512069 LBRQ14739 615 aaKnown RBP9.15□□□□□ -0.94
PDE4D-220ENST00000512069 ZNF385CQ66K41 422 aaPredicted RBP9.15□□□□□ -0.94
PDE4D-220ENST00000512069 POTEAQ6S8J7 498 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 STAG2Q8N3U4 1231 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 L3MBTL2Q969R5 705 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 HINFPQ9BQA5 517 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 ZDHHC3Q9NYG2 299 aa9.15□□□□□ -0.94
PDE4D-220ENST00000512069 C21orf2O43822 256 aa9.14□□□□□ -0.95
PDE4D-220ENST00000512069 TXLNAP40222 546 aa9.14□□□□□ -0.95
PDE4D-220ENST00000512069 ARSJQ5FYB0 599 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-220ENST00000512069 EFHC2Q5JST6 749 aa9.14□□□□□ -0.95
PDE4D-220ENST00000512069 CRISPLD1Q9H336 500 aa9.14□□□□□ -0.95
PDE4D-220ENST00000512069 SERTM1A2A2V5 107 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 LGR5O75473 907 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 MX2P20592 715 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 SH3PXD2AQ5TCZ1 1133 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 SVOPQ8N4V2 548 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 ZNF232Q9UNY5 417 aa9.13□□□□□ -0.95
PDE4D-220ENST00000512069 IGF1RP08069 1367 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 A0A1W2PNR3 127 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 EML1O00423 815 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 BNIP3LO60238 219 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
PDE4D-220ENST00000512069 C7orf43Q8WVR3 580 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 SCG3Q8WXD2 468 aaKnown RBP9.12□□□□□ -0.95
PDE4D-220ENST00000512069 ABHD17AQ96GS6 310 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 ZIC5Q96T25 663 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 CFHR5Q9BXR6 569 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 ZCCHC2Q9C0B9 1178 aaKnown RBP9.12□□□□□ -0.95
PDE4D-220ENST00000512069 ZMIZ1Q9ULJ6 1067 aa9.12□□□□□ -0.95
PDE4D-220ENST00000512069 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
PDE4D-220ENST00000512069 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
PDE4D-220ENST00000512069 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
PDE4D-220ENST00000512069 IGFBP4P22692 258 aa9.11□□□□□ -0.95
PDE4D-220ENST00000512069 FAM69CQ0P6D2 419 aa9.11□□□□□ -0.95
PDE4D-220ENST00000512069 SWI5Q1ZZU3 235 aa9.11□□□□□ -0.95
PDE4D-220ENST00000512069 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
PDE4D-220ENST00000512069 WEE1P30291 646 aa9.1□□□□□ -0.95
PDE4D-220ENST00000512069 C1orf53Q5VUE5 145 aa9.1□□□□□ -0.95
PDE4D-220ENST00000512069 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
PDE4D-220ENST00000512069 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
PDE4D-220ENST00000512069 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-220ENST00000512069 CELA2BP08218 269 aaPredicted RBP9.09□□□□□ -0.95
PDE4D-220ENST00000512069 KLRG1Q96E93 195 aa9.09□□□□□ -0.95
PDE4D-220ENST00000512069 NDFIP2Q9NV92 336 aa9.09□□□□□ -0.95
PDE4D-220ENST00000512069 ADAMTS8Q9UP79 889 aa9.09□□□□□ -0.95
PDE4D-220ENST00000512069 PHF24Q9UPV7 400 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms