RNA–Protein interactions for RNA: ENST00000511412.1

ALYREF-203, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-203ENST00000511412 BCS1LQ9Y276 419 aa33.04■■■□□ 2.88
ALYREF-203ENST00000511412 DPEP1P16444 411 aa33.03■■■□□ 2.88
ALYREF-203ENST00000511412 CEMIPQ8WUJ3 1361 aa33.02■■■□□ 2.88
ALYREF-203ENST00000511412 ZNF790Q6PG37 636 aa33.01■■■□□ 2.87
ALYREF-203ENST00000511412 PHACTR3Q96KR7 559 aa33.01■■■□□ 2.87
ALYREF-203ENST00000511412 HEG1Q9ULI3 1381 aa33■■■□□ 2.87
ALYREF-203ENST00000511412 POLRMTO00411 1230 aaKnown RBP33■■■□□ 2.87
ALYREF-203ENST00000511412 U2AF1L5P0DN76 240 aaPredicted RBP33■■■□□ 2.87
ALYREF-203ENST00000511412 U2AF1Q01081 240 aaKnown RBP eCLIP33■■■□□ 2.87
ALYREF-203ENST00000511412 NARFQ9UHQ1 456 aa33■■■□□ 2.87
ALYREF-203ENST00000511412 STARD3NLO95772 234 aa32.99■■■□□ 2.87
ALYREF-203ENST00000511412 ZNF496Q96IT1 587 aaPredicted RBP32.99■■■□□ 2.87
ALYREF-203ENST00000511412 GPBP1L1Q9HC44 474 aaPredicted RBP32.99■■■□□ 2.87
ALYREF-203ENST00000511412 ARFGEF1Q9Y6D6 1849 aa32.99■■■□□ 2.87
ALYREF-203ENST00000511412 SENP3-EIF4A1A0A087X0R7 540 aa32.98■■■□□ 2.87
ALYREF-203ENST00000511412 TM4SF1P30408 202 aa32.98■■■□□ 2.87
ALYREF-203ENST00000511412 FCHSD2O94868 740 aa32.97■■■□□ 2.87
ALYREF-203ENST00000511412 CANXP27824 592 aaKnown RBP32.97■■■□□ 2.87
ALYREF-203ENST00000511412 AFDNP55196 1824 aaKnown RBP32.96■■■□□ 2.87
ALYREF-203ENST00000511412 NRXN2Q9P2S2 1712 aa32.96■■■□□ 2.87
ALYREF-203ENST00000511412 ZNF526Q8TF50 670 aaPredicted RBP32.95■■■□□ 2.87
ALYREF-203ENST00000511412 SCN7AQ01118 1682 aa32.94■■■□□ 2.86
ALYREF-203ENST00000511412 KCNA3P22001 575 aa32.94■■■□□ 2.86
ALYREF-203ENST00000511412 FMNL2Q96PY5 1086 aa32.94■■■□□ 2.86
ALYREF-203ENST00000511412 TEX13AQ9BXU3 409 aaPredicted RBP32.94■■■□□ 2.86
ALYREF-203ENST00000511412 NFIXQ14938 502 aa32.93■■■□□ 2.86
ALYREF-203ENST00000511412 PIM2Q9P1W9 311 aa32.93■■■□□ 2.86
ALYREF-203ENST00000511412 BTBD11A6QL63 1104 aa32.92■■■□□ 2.86
ALYREF-203ENST00000511412 EIF5P55010 431 aaKnown RBP32.91■■■□□ 2.86
ALYREF-203ENST00000511412 ARHGAP27Q6ZUM4 889 aa32.91■■■□□ 2.86
ALYREF-203ENST00000511412 RTF1Q92541 710 aaKnown RBP32.91■■■□□ 2.86
ALYREF-203ENST00000511412 BCL2L12Q9HB09 334 aa32.91■■■□□ 2.86
ALYREF-203ENST00000511412 A0A087WZG4 1122 aa32.9■■■□□ 2.86
ALYREF-203ENST00000511412 CHRNA5P30532 468 aa32.88■■■□□ 2.85
ALYREF-203ENST00000511412 DALRD3Q5D0E6 543 aaKnown RBP32.88■■■□□ 2.85
ALYREF-203ENST00000511412 ZNF330Q9Y3S2 320 aaPredicted RBP32.87■■■□□ 2.85
ALYREF-203ENST00000511412 DLEC1Q9Y238 1755 aa32.87■■■□□ 2.85
ALYREF-203ENST00000511412 MCM10Q7L590 875 aa32.86■■■□□ 2.85
ALYREF-203ENST00000511412 KCNQ3O43525 872 aa32.85■■■□□ 2.85
ALYREF-203ENST00000511412 SERPINB2P05120 415 aa32.85■■■□□ 2.85
ALYREF-203ENST00000511412 IL6STP40189 918 aaPredicted RBP32.85■■■□□ 2.85
ALYREF-203ENST00000511412 BCORQ6W2J9 1755 aa32.83■■■□□ 2.85
ALYREF-203ENST00000511412 HTATSF1O43719 755 aaKnown RBP32.82■■■□□ 2.84
ALYREF-203ENST00000511412 BICDL1Q6ZP65 573 aa32.82■■■□□ 2.84
ALYREF-203ENST00000511412 NPM2Q86SE8 214 aaKnown RBP32.82■■■□□ 2.84
ALYREF-203ENST00000511412 A1BGP04217 495 aa32.81■■■□□ 2.84
ALYREF-203ENST00000511412 NEFMP07197 916 aa32.8■■■□□ 2.84
ALYREF-203ENST00000511412 DCTN1Q14203 1278 aa32.8■■■□□ 2.84
ALYREF-203ENST00000511412 TBC1D2BQ9UPU7 963 aa32.8■■■□□ 2.84
ALYREF-203ENST00000511412 CARMIL3Q8ND23 1372 aa32.8■■■□□ 2.84
ALYREF-203ENST00000511412 DLG5Q8TDM6 1919 aa32.79■■■□□ 2.84
ALYREF-203ENST00000511412 TBC1D9BQ66K14 1250 aa32.78■■■□□ 2.84
ALYREF-203ENST00000511412 C9orf131Q5VYM1 1079 aa32.76■■■□□ 2.83
ALYREF-203ENST00000511412 USP16Q9Y5T5 823 aa32.76■■■□□ 2.83
ALYREF-203ENST00000511412 ANKRD31Q8N7Z5 1873 aa32.76■■■□□ 2.83
ALYREF-203ENST00000511412 SNRPA1P09661 255 aaKnown RBP32.75■■■□□ 2.83
ALYREF-203ENST00000511412 LAMB4A4D0S4 1761 aa32.75■■■□□ 2.83
ALYREF-203ENST00000511412 PRAMEF22A3QJZ6 481 aa32.74■■■□□ 2.83
ALYREF-203ENST00000511412 KIF3CO14782 793 aa32.74■■■□□ 2.83
ALYREF-203ENST00000511412 CAMTA2O94983 1202 aa32.73■■■□□ 2.83
ALYREF-203ENST00000511412 DZIP3Q86Y13 1208 aaKnown RBP32.73■■■□□ 2.83
ALYREF-203ENST00000511412 C2CD5Q86YS7 1000 aa32.73■■■□□ 2.83
ALYREF-203ENST00000511412 KDM3BQ7LBC6 1761 aa32.72■■■□□ 2.83
ALYREF-203ENST00000511412 PIP4K2AP48426 406 aaPredicted RBP32.71■■■□□ 2.83
ALYREF-203ENST00000511412 TAF7Q15545 349 aaPredicted RBP32.71■■■□□ 2.83
ALYREF-203ENST00000511412 RNF181Q9P0P0 153 aa32.71■■■□□ 2.83
ALYREF-203ENST00000511412 SBF1O95248 1867 aa32.71■■■□□ 2.83
ALYREF-203ENST00000511412 COL11A2P13942 1736 aaPredicted RBP32.71■■■□□ 2.83
ALYREF-203ENST00000511412 H0YIN7 160 aa32.7■■■□□ 2.83
ALYREF-203ENST00000511412 TTLL6Q8N841 843 aa32.7■■■□□ 2.83
ALYREF-203ENST00000511412 PLEKHF1Q96S99 279 aa32.7■■■□□ 2.83
ALYREF-203ENST00000511412 PRR5LQ6MZQ0 368 aa32.69■■■□□ 2.82
ALYREF-203ENST00000511412 SETDB2Q96T68 719 aa32.68■■■□□ 2.82
ALYREF-203ENST00000511412 MAPK8IP3Q9UPT6 1336 aa32.68■■■□□ 2.82
ALYREF-203ENST00000511412 PNNQ9H307 717 aaKnown RBP32.67■■■□□ 2.82
ALYREF-203ENST00000511412 PDZRN3Q9UPQ7 1066 aa32.67■■■□□ 2.82
ALYREF-203ENST00000511412 NPHP1O15259 732 aa32.66■■■□□ 2.82
ALYREF-203ENST00000511412 PDE6BP35913 854 aa32.66■■■□□ 2.82
ALYREF-203ENST00000511412 CNBD1Q8NA66 436 aa32.66■■■□□ 2.82
ALYREF-203ENST00000511412 BRIP1Q9BX63 1249 aa32.66■■■□□ 2.82
ALYREF-203ENST00000511412 RASSF7Q02833 373 aa32.65■■■□□ 2.82
ALYREF-203ENST00000511412 NFE2L2Q16236 605 aa32.65■■■□□ 2.82
ALYREF-203ENST00000511412 PNISRQ8TF01 805 aaKnown RBP32.65■■■□□ 2.82
ALYREF-203ENST00000511412 HSPA6P17066 643 aa32.64■■■□□ 2.82
ALYREF-203ENST00000511412 RALBP1Q15311 655 aa32.64■■■□□ 2.82
ALYREF-203ENST00000511412 NMRK2Q9NPI5 230 aa32.64■■■□□ 2.82
ALYREF-203ENST00000511412 MIS18AQ9NYP9 233 aa32.64■■■□□ 2.82
ALYREF-203ENST00000511412 ZNF652Q9Y2D9 606 aa32.64■■■□□ 2.82
ALYREF-203ENST00000511412 CCDC24Q8N4L8 307 aa32.63■■■□□ 2.81
ALYREF-203ENST00000511412 ST5P78524 1137 aa32.62■■■□□ 2.81
ALYREF-203ENST00000511412 CLEC4GQ6UXB4 293 aa32.62■■■□□ 2.81
ALYREF-203ENST00000511412 TNRC6CQ9HCJ0 1690 aaKnown RBP32.62■■■□□ 2.81
ALYREF-203ENST00000511412 KDM2BQ8NHM5 1336 aa32.61■■■□□ 2.81
ALYREF-203ENST00000511412 TIAM2Q8IVF5 1701 aa32.61■■■□□ 2.81
ALYREF-203ENST00000511412 NBPF26B4DH59 902 aa32.61■■■□□ 2.81
ALYREF-203ENST00000511412 NBPF10Q6P3W6 841 aaKnown RBP32.61■■■□□ 2.81
ALYREF-203ENST00000511412 NBPF15Q8N660 670 aa32.61■■■□□ 2.81
ALYREF-203ENST00000511412 ZNF622Q969S3 477 aaKnown RBP eCLIP32.61■■■□□ 2.81
ALYREF-203ENST00000511412 ZC3H4Q9UPT8 1303 aaKnown RBP32.59■■■□□ 2.81
ALYREF-203ENST00000511412 TOMM70O94826 608 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms