RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SERPINB2P05120 415 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 APLP1P51693 650 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 TEFQ10587 303 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 NFIXQ14938 502 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 TEX13AQ9BXU3 409 aaPredicted RBP11.23□□□□□ -0.61
TRIO-217ENST00000511019 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
TRIO-217ENST00000511019 A0A087WZG4 1122 aa11.22□□□□□ -0.61
TRIO-217ENST00000511019 GNAT3A8MTJ3 354 aa11.22□□□□□ -0.61
TRIO-217ENST00000511019 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
TRIO-217ENST00000511019 COL5A3P25940 1745 aaPredicted RBP11.22□□□□□ -0.61
TRIO-217ENST00000511019 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
TRIO-217ENST00000511019 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
TRIO-217ENST00000511019 RNF181Q9P0P0 153 aa11.22□□□□□ -0.61
TRIO-217ENST00000511019 KIF13BQ9NQT8 1826 aa11.21□□□□□ -0.61
TRIO-217ENST00000511019 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
TRIO-217ENST00000511019 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
TRIO-217ENST00000511019 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
TRIO-217ENST00000511019 RRAGCQ9HB90 399 aa11.21□□□□□ -0.61
TRIO-217ENST00000511019 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
TRIO-217ENST00000511019 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.62
TRIO-217ENST00000511019 COL15A1P39059 1388 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 H0YIN7 160 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 EIF5P55010 431 aaKnown RBP11.2□□□□□ -0.62
TRIO-217ENST00000511019 ZNF790Q6PG37 636 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
TRIO-217ENST00000511019 C2CD5Q86YS7 1000 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
TRIO-217ENST00000511019 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
TRIO-217ENST00000511019 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
TRIO-217ENST00000511019 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
TRIO-217ENST00000511019 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
TRIO-217ENST00000511019 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 FSTL1Q12841 308 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 DNAJC5GQ8N7S2 189 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 FMNL2Q96PY5 1086 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 TBC1D2BQ9UPU7 963 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 TJP1Q07157 1748 aa11.18□□□□□ -0.62
TRIO-217ENST00000511019 A1BGP04217 495 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 LMNB1P20700 586 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 PDE6BP35913 854 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
TRIO-217ENST00000511019 TBC1D9BQ66K14 1250 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIO-217ENST00000511019 BRIP1Q9BX63 1249 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 MRC1P22897 1456 aa11.17□□□□□ -0.62
TRIO-217ENST00000511019 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
TRIO-217ENST00000511019 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
TRIO-217ENST00000511019 KCPQ6ZWJ8 1503 aa11.16□□□□□ -0.62
TRIO-217ENST00000511019 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
TRIO-217ENST00000511019 RASSF7Q02833 373 aa11.16□□□□□ -0.62
TRIO-217ENST00000511019 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
TRIO-217ENST00000511019 PHACTR3Q96KR7 559 aa11.16□□□□□ -0.62
TRIO-217ENST00000511019 SETDB2Q96T68 719 aa11.16□□□□□ -0.62
TRIO-217ENST00000511019 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
TRIO-217ENST00000511019 GLTPD2A6NH11 291 aa11.15□□□□□ -0.62
TRIO-217ENST00000511019 NPHP1O15259 732 aa11.15□□□□□ -0.62
TRIO-217ENST00000511019 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
TRIO-217ENST00000511019 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
TRIO-217ENST00000511019 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIO-217ENST00000511019 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
TRIO-217ENST00000511019 KCNQ3O43525 872 aa11.14□□□□□ -0.63
TRIO-217ENST00000511019 PRR5LQ6MZQ0 368 aa11.14□□□□□ -0.63
TRIO-217ENST00000511019 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
TRIO-217ENST00000511019 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
TRIO-217ENST00000511019 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
TRIO-217ENST00000511019 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
TRIO-217ENST00000511019 USP16Q9Y5T5 823 aa11.14□□□□□ -0.63
TRIO-217ENST00000511019 C21orf2O43822 256 aa11.13□□□□□ -0.63
TRIO-217ENST00000511019 SNRPA1P09661 255 aaKnown RBP11.13□□□□□ -0.63
TRIO-217ENST00000511019 PRELPP51888 382 aa11.13□□□□□ -0.63
TRIO-217ENST00000511019 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
TRIO-217ENST00000511019 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
TRIO-217ENST00000511019 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
TRIO-217ENST00000511019 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 NFKBIEO00221 500 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 CAMTA2O94983 1202 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 ST5P78524 1137 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 HTRA3P83110 453 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 CNBD1Q8NA66 436 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 KLRG1Q96E93 195 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 BRCA1P38398 1863 aaKnown RBP11.12□□□□□ -0.63
TRIO-217ENST00000511019 CARMIL3Q8ND23 1372 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 CEMIPQ8WUJ3 1361 aa11.12□□□□□ -0.63
TRIO-217ENST00000511019 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
TRIO-217ENST00000511019 ERFEQ4G0M1 354 aa11.11□□□□□ -0.63
TRIO-217ENST00000511019 STYK1Q6J9G0 422 aa11.11□□□□□ -0.63
TRIO-217ENST00000511019 CLEC4GQ6UXB4 293 aa11.11□□□□□ -0.63
TRIO-217ENST00000511019 MCM10Q7L590 875 aa11.11□□□□□ -0.63
TRIO-217ENST00000511019 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
TRIO-217ENST00000511019 NEFMP07197 916 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms