RNA–Protein interactions for RNA: ENST00000510679.1

SMN1-207, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 3

Gene SMN1, Length 1,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-207ENST00000510679 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
SMN1-207ENST00000510679 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
SMN1-207ENST00000510679 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
SMN1-207ENST00000510679 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
SMN1-207ENST00000510679 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
SMN1-207ENST00000510679 SHANK3Q9BYB0 1731 aa14.09□□□□□ -0.15
SMN1-207ENST00000510679 DOT1LQ8TEK3 1739 aa14.08□□□□□ -0.16
SMN1-207ENST00000510679 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
SMN1-207ENST00000510679 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
SMN1-207ENST00000510679 BTAF1O14981 1849 aa14.08□□□□□ -0.16
SMN1-207ENST00000510679 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
SMN1-207ENST00000510679 MARVELD3Q96A59 401 aa14.07□□□□□ -0.16
SMN1-207ENST00000510679 SPON1Q9HCB6 807 aa14.07□□□□□ -0.16
SMN1-207ENST00000510679 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
SMN1-207ENST00000510679 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
SMN1-207ENST00000510679 PIGBQ92521 554 aa14.06□□□□□ -0.16
SMN1-207ENST00000510679 LRRC4BQ9NT99 713 aa14.06□□□□□ -0.16
SMN1-207ENST00000510679 LRP5O75197 1615 aa14.05□□□□□ -0.16
SMN1-207ENST00000510679 HMOX1P09601 288 aa14.05□□□□□ -0.16
SMN1-207ENST00000510679 PPP2R1AP30153 589 aa14.05□□□□□ -0.16
SMN1-207ENST00000510679 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
SMN1-207ENST00000510679 CABP4P57796 275 aa14.04□□□□□ -0.16
SMN1-207ENST00000510679 DOK7Q18PE1 504 aa14.04□□□□□ -0.16
SMN1-207ENST00000510679 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
SMN1-207ENST00000510679 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
SMN1-207ENST00000510679 HOXB3P14651 431 aaPredicted RBP14.03□□□□□ -0.16
SMN1-207ENST00000510679 EMP3P54852 163 aa14.03□□□□□ -0.16
SMN1-207ENST00000510679 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
SMN1-207ENST00000510679 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
SMN1-207ENST00000510679 ZNF710Q8N1W2 664 aa14.03□□□□□ -0.16
SMN1-207ENST00000510679 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
SMN1-207ENST00000510679 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.16
SMN1-207ENST00000510679 RALBP1Q15311 655 aa14.02□□□□□ -0.17
SMN1-207ENST00000510679 ZNF827Q17R98 1081 aa14.02□□□□□ -0.17
SMN1-207ENST00000510679 FLAD1Q8NFF5 587 aa14.02□□□□□ -0.17
SMN1-207ENST00000510679 GAS2L2Q8NHY3 880 aa14.02□□□□□ -0.17
SMN1-207ENST00000510679 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
SMN1-207ENST00000510679 MTFR1LQ9H019 292 aa14.02□□□□□ -0.17
SMN1-207ENST00000510679 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
SMN1-207ENST00000510679 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
SMN1-207ENST00000510679 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
SMN1-207ENST00000510679 ZBTB7AO95365 584 aa14□□□□□ -0.17
SMN1-207ENST00000510679 NEFMP07197 916 aa14□□□□□ -0.17
SMN1-207ENST00000510679 KCNQ4P56696 695 aa14□□□□□ -0.17
SMN1-207ENST00000510679 SIK1P57059 783 aa14□□□□□ -0.17
SMN1-207ENST00000510679 KDM6AO15550 1401 aaPredicted RBP13.99□□□□□ -0.17
SMN1-207ENST00000510679 LY75O60449 1722 aa13.99□□□□□ -0.17
SMN1-207ENST00000510679 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
SMN1-207ENST00000510679 FCHSD2O94868 740 aa13.99□□□□□ -0.17
SMN1-207ENST00000510679 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
SMN1-207ENST00000510679 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMN1-207ENST00000510679 MTHFSDQ2M296 383 aaKnown RBP13.99□□□□□ -0.17
SMN1-207ENST00000510679 AK7Q96M32 723 aa13.99□□□□□ -0.17
SMN1-207ENST00000510679 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
SMN1-207ENST00000510679 ASAP1Q9ULH1 1129 aa13.99□□□□□ -0.17
SMN1-207ENST00000510679 TOGARAM1Q9Y4F4 1720 aa13.98□□□□□ -0.17
SMN1-207ENST00000510679 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
SMN1-207ENST00000510679 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
SMN1-207ENST00000510679 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
SMN1-207ENST00000510679 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
SMN1-207ENST00000510679 GNAT3A8MTJ3 354 aa13.97□□□□□ -0.17
SMN1-207ENST00000510679 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
SMN1-207ENST00000510679 PRKAR2BP31323 418 aa13.97□□□□□ -0.17
SMN1-207ENST00000510679 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
SMN1-207ENST00000510679 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
SMN1-207ENST00000510679 POLD1P28340 1107 aa13.96□□□□□ -0.17
SMN1-207ENST00000510679 PDGFDQ9GZP0 370 aaPredicted RBP13.96□□□□□ -0.17
SMN1-207ENST00000510679 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
SMN1-207ENST00000510679 CASZ1Q86V15 1759 aa13.96□□□□□ -0.18
SMN1-207ENST00000510679 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
SMN1-207ENST00000510679 ITGB4P16144 1822 aa13.94□□□□□ -0.18
SMN1-207ENST00000510679 SSFA2P28290 1259 aa13.94□□□□□ -0.18
SMN1-207ENST00000510679 TEFQ10587 303 aa13.94□□□□□ -0.18
SMN1-207ENST00000510679 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
SMN1-207ENST00000510679 HOXB1P14653 301 aaPredicted RBP13.93□□□□□ -0.18
SMN1-207ENST00000510679 PTGER2P43116 358 aa13.93□□□□□ -0.18
SMN1-207ENST00000510679 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
SMN1-207ENST00000510679 RTF1Q92541 710 aaKnown RBP13.93□□□□□ -0.18
SMN1-207ENST00000510679 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
SMN1-207ENST00000510679 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
SMN1-207ENST00000510679 ITPK1Q13572 414 aa13.92□□□□□ -0.18
SMN1-207ENST00000510679 RC3H1Q5TC82 1133 aaKnown RBP13.92□□□□□ -0.18
SMN1-207ENST00000510679 COL23A1Q86Y22 540 aaPredicted RBP13.92□□□□□ -0.18
SMN1-207ENST00000510679 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
SMN1-207ENST00000510679 ARXQ96QS3 562 aa13.92□□□□□ -0.18
SMN1-207ENST00000510679 MRC1P22897 1456 aa13.92□□□□□ -0.18
SMN1-207ENST00000510679 C5P01031 1676 aa13.91□□□□□ -0.18
SMN1-207ENST00000510679 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
SMN1-207ENST00000510679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
SMN1-207ENST00000510679 FAM205CA6NFA0 338 aa13.91□□□□□ -0.18
SMN1-207ENST00000510679 GNPATO15228 680 aa13.91□□□□□ -0.18
SMN1-207ENST00000510679 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
SMN1-207ENST00000510679 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
SMN1-207ENST00000510679 RTCBQ9Y3I0 505 aaKnown RBP13.91□□□□□ -0.18
SMN1-207ENST00000510679 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
SMN1-207ENST00000510679 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.18
SMN1-207ENST00000510679 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
SMN1-207ENST00000510679 PHF14O94880 888 aa13.9□□□□□ -0.18
SMN1-207ENST00000510679 TRAPPC3LQ5T215 181 aa13.89□□□□□ -0.19
SMN1-207ENST00000510679 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms